prot_H-elongata_contig188726.5178.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188726.5178.1
Unique Nameprot_H-elongata_contig188726.5178.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 4.780e-10
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            MA  DR+ L AL+ AT G  W +N+ W T A L +W+GV VN  GRV AL L
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALEL 52          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: D7FHA4_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA4_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 5.420e-10
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALILT 53
            M   DR  L ALF +T G  W+ N  W TDA+L +WYGV+VN DGRV+ L L+
Sbjct:    1 MPSEDRAALVALFRSTGGTLWKHNAYWDTDAKLSQWYGVYVNQDGRVKELRLS 53          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: A0A7X3WE75_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3WE75_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 8.740e-9
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    5 DREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            DR  L AL+++T+G +W+ +  W TD  L  WYGV VNA GRV +L+L
Sbjct:  282 DRSSLIALYISTDGGNWKQSANWLTDEPLSTWYGVGVNAAGRVDSLVL 329          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: A0A6B1AS51_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6B1AS51_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 1.190e-8
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 AQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALILT 53
            AQ DR  L AL+ AT+G +W +N+ W TDA L EWYGV V+A+GRV  L L+
Sbjct:  480 AQDDRSVLVALYEATDGPNWVNNEKWLTDAPLGEWYGVEVDANGRVIRLELS 531          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.190e-8
Identity = 27/52 (51.92%), Postives = 30/52 (57.69%), Query Frame = 0
Query:    1 MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            +A  D   L AL+  T GD W    GWCT  ELQEW+GV VN  GRV  L L
Sbjct:   22 LAPVDYGALTALYRLTQGDGWTRRDGWCTPVELQEWFGVEVNEQGRVVKLDL 73          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: D7FUH5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH5_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 6.000e-8
Identity = 28/52 (53.85%), Postives = 30/52 (57.69%), Query Frame = 0
Query:    1 MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            MA  DR  L ALF AT G  WR +  W T   L  WYGV VNA+GRV  L L
Sbjct:    1 MASTDRNALIALFQATRGAEWRKSDNWGTSEGLGTWYGVDVNAEGRVVKLSL 52          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: A0A7K1ZHU6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZHU6_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 7.900e-8
Identity = 24/48 (50.00%), Postives = 30/48 (62.50%), Query Frame = 0
Query:    5 DREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            DR  L A + +T GD WR N  W +D  L +W+GVF +ADGRV  L L
Sbjct:   49 DRNALIAFYDSTGGDSWRGNVYWKSDKPLDQWFGVFTDADGRVTELHL 96          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.460e-7
Identity = 26/52 (50.00%), Postives = 30/52 (57.69%), Query Frame = 0
Query:    1 MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            +A  D   L AL+  T GD W    GWCT  +LQEW+GV VN  GRV  L L
Sbjct:   24 LAPRDYGALAALYHLTQGDGWIHRDGWCTPVDLQEWFGVDVNEQGRVVKLDL 75          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: A0A7X3Q9V6_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7X3Q9V6_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 5.110e-7
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    5 DREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRV 47
            DRE L AL+ +T G  W +N  W TD  L++WYG+ V+A GRV
Sbjct:  200 DREALLALYHSTGGASWLNNDNWLTDEPLEDWYGIEVDAGGRV 242          
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 9.560e-7
Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    1 MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQALIL 52
            MA  DR+ L ALF +  G  WR  + W T A+L+ W+GV +N  GRV  L L
Sbjct:    1 MASTDRDALVALFRSAGGATWRRKENWDTAADLESWFGVILNNQGRVAELKL 52          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188726.5178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JX36_9PHAE4.780e-1051.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHA4_ECTSI5.420e-1052.83Hypothetical leucine rich repeat protein (Partial)... [more]
A0A7X3WE75_9BACT8.740e-950.00BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]
A0A6B1AS51_9GAMM1.190e-855.77Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
D7FPS8_ECTSI1.190e-851.92Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FUH5_ECTSI6.000e-853.85Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A7K1ZHU6_9BACT7.900e-850.00Uncharacterized protein (Fragment) n=1 Tax=Bactero... [more]
A0A6H5JBQ0_9PHAE1.460e-750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7X3Q9V6_9BACT5.110e-751.16Uncharacterized protein n=1 Tax=Gemmatimonadales b... [more]
D7FUC9_ECTSI9.560e-746.15LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..53
e-value: 3.6E-9
score: 37.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188726contigH-elongata_contig188726:378..536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188726.5178.1mRNA_H-elongata_contig188726.5178.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188726 378..818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188726.5178.1 ID=prot_H-elongata_contig188726.5178.1|Name=mRNA_H-elongata_contig188726.5178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MAQFDREGLRALFLATNGDHWRSNKGWCTDAELQEWYGVFVNADGRVQAL
ILT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf