prot_H-elongata_contig18547.5017.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18547.5017.1
Unique Nameprot_H-elongata_contig18547.5017.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: D8LJZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ9_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.190e-46
Identity = 79/112 (70.54%), Postives = 91/112 (81.25%), Query Frame = 0
Query:   45 ATPKDMDYYSGLVGLQPGEEERLAKG--EVGTAKDYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARYRGGR 154
            A P+D+DYYSGL+G QPG ++  A G  E  T  DYPI LPSYLLL+LATV  IAF GSIFEVTG +PELGYT TYIIGTL+ PTFIFLFY+AIKKG+AEVEEDDA++  GR
Sbjct:   82 AVPEDLDYYSGLIGEQPGADKAPASGKEEAVTTSDYPIPLPSYLLLVLATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPTFIFLFYAAIKKGKAEVEEDDAKFGKGR 193          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A835YHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.670e-28
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 0
Query:   76 KDYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDD 147
            K YPI+ P+Y LL L+TV  IAFVGSIFEV GP+P LGY PTYIIG L+ P FIFLFY+AIKKGQAE EEDD
Sbjct:   59 KSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDD 130          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A7S4JDB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JDB9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.050e-15
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   77 DYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARY 150
            +YP+N+PS LLL  + +  IA +GSIFE++G NP  G  PT  I  +  PT +FLFY+AI KG AE EEDD  +
Sbjct:   89 NYPLNVPSPLLLGSSMILAIASIGSIFELSGGNPSNGVGPTAAIAAIGLPTCLFLFYAAIMKGIAETEEDDKAF 162          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A2V3IZS2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS2_9FLOR)

HSP 1 Score: 75.1 bits (183), Expect = 1.800e-14
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   66 RLAKGEVGTAKDYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEED 146
            R+    + T    PIN PS +LLL ++V  IA +G +FE+TG +P  G+  T  I T++ P+F+FLFY+AIKKGQ E  ED
Sbjct:   45 RIRSYSMTTEPKAPINAPSGVLLLSSSVLAIAAIGCVFELTGGHPTYGFNVTAGILTVSLPSFLFLFYAAIKKGQIEALED 125          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A7S2P364_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P364_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.800e-13
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   78 YPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARY 150
            YPI+LPS +LL  + V  I+ +GS+FE+ G  P+LG+  T  I  L  P  +FL Y+AI KG AE EE D  +
Sbjct:   41 YPIDLPSPILLATSMVLAISSIGSLFELAGGTPKLGFAVTAAITALGLPISVFLIYAAILKGSAETEEADREF 113          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A6T6GAQ8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6GAQ8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.170e-12
Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   77 DYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARYRGGR 154
            +YP+++PS LLL  + +  I   G +FE+TG   +LG+  T  +  ++ PT +FLFY++I K  AE EEDD RY  G+
Sbjct:  115 EYPLDVPSPLLLASSMILGIIGTGCVFELTGDAEQLGFAATAALTVVSIPTCLFLFYASILKATAETEEDDRRYMEGK 192          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A7S2XVJ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.580e-12
Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   80 INLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARYR 151
            + LP+YL L+++ V  IAF+G+IFEV+G  P LG+  T+ I   + P F++LFY ++K+GQ E +ED+  +R
Sbjct:  125 LPLPAYLYLVVSCVVAIAFIGTIFEVSGGKPLLGFPLTWAIMVASGPGFLYLFYCSLKRGQIEEKEDNDTWR 196          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A7S0BY63_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY63_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.040e-10
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   79 PINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARY 150
            P+N+PS LLL  + +  IA VGS+F++ G +P+LG+  T  I T+     ++ FY AI KG +E EEDD ++
Sbjct:   52 PLNIPSPLLLGSSMILAIAGVGSMFDIAGGSPQLGFPLTESIATVGTTISLYFFYCAILKGISETEEDDEKF 123          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A7S2Y7X1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7X1_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.210e-8
Identity = 41/118 (34.75%), Postives = 60/118 (50.85%), Query Frame = 0
Query:   39 NAKLNPATPKDMDYYSGLVGL--QPGEEERLAKGEVGTAKDYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYI-IGTLAFPTFIFLFYSAIKKGQAEVEEDDARYRGG 153
            N +  P TP D+   +  +    Q      LA+ E     +YP+++PS +LL  + V  I+  GS+F     N     TP  + +  + FP F+FL Y+AI KG AE +EDD RY  G
Sbjct:   55 NTQEAPTTPDDVTSLNDTIEQLQQSSPTAVLAEQE---DVEYPLDVPSPVLLASSIVLAISSTGSLFNCIEGN----ITPVSLGLAVIGFPLFLFLLYAAILKGAAETKEDDERYLNG 165          
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Match: A0A073CJ60_PLAAG (Uncharacterized protein n=13 Tax=Planktothrix TaxID=54304 RepID=A0A073CJ60_PLAAG)

HSP 1 Score: 57.0 bits (136), Expect = 4.090e-8
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   72 VGTAKDYPINLPSYLLLLLATVACIAFVGSIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVE 144
            VGT K       S +LLL + +A IA VGS+FE++  NPELG   T +I  L+ P  +FLF++A+K  Q   E
Sbjct:    2 VGTPK-------SMVLLLGSCIAAIASVGSVFELSSGNPELGSLTTSVILALSIPLSVFLFFAAVKDAQMNQE 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18547.5017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LJZ9_ECTSI1.190e-4670.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHG1_9STRA1.670e-2873.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4JDB9_9STRA1.050e-1551.35Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2V3IZS2_9FLOR1.800e-1446.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2P364_9STRA4.800e-1346.58Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6T6GAQ8_9STRA3.170e-1242.31Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2XVJ4_9STRA3.580e-1244.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0BY63_9STRA1.040e-1043.06Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2Y7X1_9STRA1.210e-834.75Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A073CJ60_PLAAG4.090e-843.84Uncharacterized protein n=13 Tax=Planktothrix TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..136
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18547contigH-elongata_contig18547:4094..4922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18547.5017.1mRNA_H-elongata_contig18547.5017.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18547 3700..4958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18547.5017.1 ID=prot_H-elongata_contig18547.5017.1|Name=mRNA_H-elongata_contig18547.5017.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MPVRSRIRDHVARRAAEENSASTTAGFNDDATAAEVEANAKLNPATPKDM
DYYSGLVGLQPGEEERLAKGEVGTAKDYPINLPSYLLLLLATVACIAFVG
SIFEVTGPNPELGYTPTYIIGTLAFPTFIFLFYSAIKKGQAEVEEDDARY
RGGRGW*
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