prot_H-elongata_contig184906.4990.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig184906.4990.1
Unique Name	prot_H-elongata_contig184906.4990.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	84

Homology

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BLAST of mRNA_H-elongata_contig184906.4990.1 vs. uniprot
Match: D7FZX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX0_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 4.260e-28
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0

Query:    1 MQRDLGQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTQXXXXXXXXXXXVILQYGIGFFGSIIALGLAVARIA 82
            MQRDL QVKADV  EEKFD AK+HDEITELEKRVFQRRETDEVR   XXXXXXXXXXXVILQYGIGFFGS+IA+GLAVARIA
Sbjct:  120 MQRDLMQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIA 201

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BLAST of mRNA_H-elongata_contig184906.4990.1 vs. uniprot
Match: A0A6H5KWP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP7_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 5.850e-28
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0

Query:    1 MQRDLGQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTQXXXXXXXXXXXVILQYGIGFFGSIIALGLAVARIA 82
            MQRDL QVKADV  EEKFD AK+HDEITELEKRVFQRRETDEVR   XXXXXXXXXXXVILQYGIGFFGS+IA+GLAVARIA
Sbjct:  134 MQRDLMQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIA 215

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig184906.4990.1 vs. uniprot

BLAST of mRNA_H-elongata_contig184906.4990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FZX0_ECTSI	4.260e-28	87.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KWP7_9PHAE	5.850e-28	87.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 13..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 83..83
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..82
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..59
None	No IPR available	TMHMM	TMhelix		coord: 59..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig184906	contig	H-elongata_contig184906:93..1048 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig184906.4990.1	mRNA_H-elongata_contig184906.4990.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig184906 93..1078 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig184906.4990.1 ID=prot_H-elongata_contig184906.4990.1|Name=mRNA_H-elongata_contig184906.4990.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MQRDLGQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTQVHT
EIAALERRVILQYGIGFFGSIIALGLAVARIAM*