prot_H-elongata_contig182270.4885.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A1Y1MJE9_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MJE9_PHOPY) HSP 1 Score: 62.0 bits (149), Expect = 8.500e-10 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 1 MRTTNRFSSRRTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
+R + +RRT+H+D+KHH +RD VES + I Y+ S EQ AD+LTK+L ++ FE
Sbjct: 922 IRMASTLETRRTKHIDIKHHYIRDCVESERIHIQYIPSNEQQADILTKSLSLSKFE 977
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE) HSP 1 Score: 60.5 bits (145), Expect = 2.750e-9 Identity = 25/52 (48.08%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 5 NRFSSRRTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
NR +S+R +H+D+KHH +R+ V+ V++++YV + EQ+AD+LTK LD +FE
Sbjct: 283 NRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTKGLDKQSFE 334
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.970e-9 Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 1 MRTTNRFSSRRTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
+R N SS R++H+DV+HH +R+ E V+ + +V S+EQHAD+LTKAL N FE
Sbjct: 908 LRPKNPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFE 963
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.010e-8 Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 5 NRFSSRRTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
N SS R++H+DV+HH +R+ E V+ + +V S+EQHAD+LTKAL N FE
Sbjct: 323 NPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFE 374
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.040e-8 Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 5 NRFSSRRTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
N SS R++H+DV+HH +R+ E V+ + +V S+EQHAD+LTKAL N FE
Sbjct: 490 NPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFE 541
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.040e-8 Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 5 NRFSSRRTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
N SS R++H+DV+HH +R+ E V+ + +V S+EQHAD+LTKAL N FE
Sbjct: 1218 NPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFE 1269
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A392RX51_9FABA (Peroxidase 4-like (Fragment) n=2 Tax=Trifolium medium TaxID=97028 RepID=A0A392RX51_9FABA) HSP 1 Score: 55.5 bits (132), Expect = 1.110e-8 Identity = 23/46 (50.00%), Postives = 34/46 (73.91%), Query Frame = 0
Query: 11 RTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
RT+H+D++HH +RD VE +V + +V + EQ +D+ TKALD N FE
Sbjct: 36 RTKHIDIRHHFIRDFVEEKIVTLEHVATEEQLSDIFTKALDANQFE 81
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A251TG59_HELAN (Uncharacterized protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TG59_HELAN) HSP 1 Score: 55.1 bits (131), Expect = 1.210e-8 Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 0
Query: 12 TRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFET 57
T+++D++HH VRD E ++ +H+V +++Q ADVLTKALD TFE+
Sbjct: 20 TKYIDIRHHFVRDCYEKGLISLHHVPTKDQLADVLTKALDTTTFES 65
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A392MTL3_9FABA (Putative gag-pol polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MTL3_9FABA) HSP 1 Score: 58.2 bits (139), Expect = 1.680e-8 Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 0
Query: 11 RTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
RT+H+D++HH +RD VE VV + ++ + EQ AD+LTKALD N FE
Sbjct: 244 RTKHIDIRHHYIRDLVEDKVVTLEHIATEEQLADILTKALDANRFE 289
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Match: A0A2K3MMX0_TRIPR (Retrotransposon-related protein (Fragment) n=2 Tax=Trifolium TaxID=3898 RepID=A0A2K3MMX0_TRIPR) HSP 1 Score: 58.2 bits (139), Expect = 1.950e-8 Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 0
Query: 11 RTRHVDVKHHIVRDTVESVVVRIHYVKSREQHADVLTKALDINTFE 56
RT+H+D++HH +RD VE VV + ++ + EQ AD+LTKALD N FE
Sbjct: 1244 RTKHIDIRHHYIRDLVEDKVVTLEHIATEEQLADILTKALDANMFE 1289 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182270.4885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig182270.4885.1 ID=prot_H-elongata_contig182270.4885.1|Name=mRNA_H-elongata_contig182270.4885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bpback to top |