prot_H-elongata_contig181842.4870.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig181842.4870.1
Unique Name	prot_H-elongata_contig181842.4870.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	102

Homology

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 4.430e-74
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query:    1 QVPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA 100
            QV PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA
Sbjct:   28 QVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA 127

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.620e-72
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0

Query:    4 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL V
Sbjct:   23 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSLGV 120

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.190e-71
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0

Query:    3 PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 99
            PP+FEIKKWNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL
Sbjct:   61 PPKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 157

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S2S966_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S966_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.250e-69
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0

Query:    1 QVPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            Q PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWL+TRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct:   30 QPPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLRTRSVCPLCNKEWDFAKIERIPGYGQLGI 130

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A6U3THL3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3THL3_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.970e-69
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0

Query:    3 PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWL+TRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct:   35 PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLRTRSVCPLCNKEWDFAKIERIPGYGQLGI 133

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO)

HSP 1 Score: 210 bits (534), Expect = 1.090e-68
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0

Query:    4 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct:   24 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLGI 121

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.190e-68
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0

Query:    5 RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL +
Sbjct:   49 RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSLGI 145

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.330e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0

Query:    4 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA 100
            PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LA
Sbjct:   30 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLA 126

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.470e-68
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0

Query:    4 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct:   33 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLGI 130

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BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC)

HSP 1 Score: 209 bits (532), Expect = 3.370e-68
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0

Query:    4 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 101
            PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct:   37 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLGL 134

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot

BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6S7_ECTSI	4.430e-74	99.00	RING-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A7S2Y0P1_9STRA	1.620e-72	96.94	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3K273_9STRA	1.190e-71	96.91	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2S966_9STRA	1.250e-69	91.09	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A6U3THL3_9STRA	3.970e-69	91.92	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A1Z5J6S6_FISSO	1.090e-68	92.86	RING-box protein 1 n=2 Tax=Fistulifera solaris Tax...	[more]
A0A7S1BRM9_9STRA	1.190e-68	93.81	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A1E7FMU3_9STRA	1.330e-68	94.85	Ring-box protein n=1 Tax=Fragilariopsis cylindrus ...	[more]
A0A7S3PD50_9STRA	1.470e-68	92.86	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
B7G7T1_PHATC	3.370e-68	92.86	Predicted protein n=4 Tax=Phaeodactylum tricornutu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 26..81 e-value: 1.4E-5 score: 34.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 26..82 score: 11.929
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 1..92 e-value: 2.0E-29 score: 103.6
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 24..82 e-value: 4.3E-21 score: 75.0
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 3..91
None	No IPR available	PANTHER	PTHR11210:SF2	E3 UBIQUITIN-PROTEIN LIGASE RBX1	coord: 3..91
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 4..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig181842	contig	H-elongata_contig181842:120..973 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig181842.4870.1	mRNA_H-elongata_contig181842.4870.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig181842 120..973 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig181842.4870.1 ID=prot_H-elongata_contig181842.4870.1|Name=mRNA_H-elongata_contig181842.4870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
QVPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNEN
GLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA
V*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR024766	Znf_RING_H2