mRNA_H-elongata_contig181842.4870.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI) HSP 1 Score: 224 bits (570), Expect = 4.430e-74 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1
Query: 1 QVPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA 300
QV PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA
Sbjct: 28 QVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA 127
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.620e-72 Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 1
Query: 10 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL V
Sbjct: 23 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSLGV 120
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.190e-71 Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 1
Query: 7 PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 297
PP+FEIKKWNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL
Sbjct: 61 PPKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 157
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S2S966_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S966_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.250e-69 Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 1
Query: 1 QVPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
Q PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWL+TRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct: 30 QPPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLRTRSVCPLCNKEWDFAKIERIPGYGQLGI 130
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A6U3THL3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3THL3_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.970e-69 Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 1
Query: 7 PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWL+TRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct: 35 PPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLRTRSVCPLCNKEWDFAKIERIPGYGQLGI 133
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO) HSP 1 Score: 210 bits (534), Expect = 1.090e-68 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1
Query: 10 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct: 24 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLGI 121
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.190e-68 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 1
Query: 13 RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL +
Sbjct: 49 RFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSLGI 145
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.330e-68 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 1
Query: 10 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLA 300
PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LA
Sbjct: 30 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLA 126
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.470e-68 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1
Query: 10 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct: 33 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLGI 130
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC) HSP 1 Score: 209 bits (532), Expect = 3.370e-68 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1
Query: 10 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAV 303
PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L +
Sbjct: 37 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLGL 134 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181842.4870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig181842.4870.1 >prot_H-elongata_contig181842.4870.1 ID=prot_H-elongata_contig181842.4870.1|Name=mRNA_H-elongata_contig181842.4870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp QVPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENback to top mRNA from alignment at H-elongata_contig181842:120..973- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig181842.4870.1 ID=mRNA_H-elongata_contig181842.4870.1|Name=mRNA_H-elongata_contig181842.4870.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=854bp|location=Sequence derived from alignment at H-elongata_contig181842:120..973- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig181842:120..973- >mRNA_H-elongata_contig181842.4870.1 ID=mRNA_H-elongata_contig181842.4870.1|Name=mRNA_H-elongata_contig181842.4870.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at H-elongata_contig181842:120..973- (Himanthalia elongata Himel1 dioecious)back to top |