prot_H-elongata_contig181200.4843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig181200.4843.1
Unique Nameprot_H-elongata_contig181200.4843.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
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BLAST of mRNA_H-elongata_contig181200.4843.1 vs. uniprot
Match: A0A6H5KK84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK84_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.220e-16
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0 
Query:    1 MLALLECVVKQREVTEETLRPHAECLVRKMVLPNVVWRAGLVAATVRKVTEGVAF 55
            MLALLECVVK   VTEE+LRPHAE ++++MVLPN VWRAGLVAATVRKV   V +
Sbjct:  473 MLALLECVVKHDGVTEESLRPHAETMLKEMVLPNAVWRAGLVAATVRKVAIAVLY 527
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BLAST of mRNA_H-elongata_contig181200.4843.1 vs. uniprot
Match: D7FI57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI57_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 4.270e-16
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:    1 MLALLECVVKQREVTEETLRPHAECLVRKMVLPNVVWRAGLVAATVRKVTEGVAF 55
            MLALLECVVK   VTEE+LRPHAE L+++MVLPN VWRAGLVAA VRKV   V +
Sbjct:  666 MLALLECVVKHDGVTEESLRPHAETLLKEMVLPNAVWRAGLVAAPVRKVAIAVLY 720
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181200.4843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KK84_9PHAE1.220e-1672.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI57_ECTSI4.270e-1672.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181200contigH-elongata_contig181200:1050..1232 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181200.4843.1mRNA_H-elongata_contig181200.4843.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig181200 1050..1262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig181200.4843.1 ID=prot_H-elongata_contig181200.4843.1|Name=mRNA_H-elongata_contig181200.4843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MLALLECVVKQREVTEETLRPHAECLVRKMVLPNVVWRAGLVAATVRKVT
EGVAFGTVFR*
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