prot_H-elongata_contig180942.4829.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig180942.4829.1
Unique Name	prot_H-elongata_contig180942.4829.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	58

Homology

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BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot
Match: D7FS90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS90_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 3.090e-19
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0

Query:    8 DKTEWTVTGGYTVGEFWGLVLQTVCLPGAAVALLTFMVFFYKSPAWTSWVR 58
            D+ EW+V  GYTVG+FWGLV QT+CLP AAVAL+TF +  YKSPAW SWV+
Sbjct:   46 DQEEWSVDSGYTVGQFWGLVTQTLCLPAAAVALMTFALHSYKSPAWPSWVK 96

[Close]

BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot
Match: A0A6H5KA77_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA77_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.270e-17
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0

Query:    8 DKTEWTVTGGYTVGEFWGLVLQTVCLPGAAVALLTFMVFFYKSPAWTSWVR 58
            D+ EW+V  GYTVG+FWGLV QT+CLP AAVAL+TF +  YKSPAW SWV+
Sbjct:   46 DQEEWSVDSGYTVGQFWGLVTQTLCLPAAAVALMTFTLHSYKSPAWPSWVK 96

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot

BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FS90_ECTSI	3.090e-19	68.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KA77_9PHAE	2.270e-17	68.63	FAD-binding FR-type domain-containing protein n=1 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 23..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..58
None	No IPR available	TMHMM	TMhelix		coord: 26..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig180942	contig	H-elongata_contig180942:71..244 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig180942.4829.1	mRNA_H-elongata_contig180942.4829.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig180942 71..244 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig180942.4829.1 ID=prot_H-elongata_contig180942.4829.1|Name=mRNA_H-elongata_contig180942.4829.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
FYLFFSQDKTEWTVTGGYTVGEFWGLVLQTVCLPGAAVALLTFMVFFYKS
PAWTSWVR