prot_H-elongata_contig180942.4829.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig180942.4829.1
Unique Nameprot_H-elongata_contig180942.4829.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
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BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot
Match: D7FS90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS90_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 3.090e-19
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:    8 DKTEWTVTGGYTVGEFWGLVLQTVCLPGAAVALLTFMVFFYKSPAWTSWVR 58
            D+ EW+V  GYTVG+FWGLV QT+CLP AAVAL+TF +  YKSPAW SWV+
Sbjct:   46 DQEEWSVDSGYTVGQFWGLVTQTLCLPAAAVALMTFALHSYKSPAWPSWVK 96
[Close]
BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot
Match: A0A6H5KA77_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA77_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.270e-17
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:    8 DKTEWTVTGGYTVGEFWGLVLQTVCLPGAAVALLTFMVFFYKSPAWTSWVR 58
            D+ EW+V  GYTVG+FWGLV QT+CLP AAVAL+TF +  YKSPAW SWV+
Sbjct:   46 DQEEWSVDSGYTVGQFWGLVTQTLCLPAAAVALMTFTLHSYKSPAWPSWVK 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180942.4829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS90_ECTSI3.090e-1968.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA77_9PHAE2.270e-1768.63FAD-binding FR-type domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..58
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig180942contigH-elongata_contig180942:71..244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig180942.4829.1mRNA_H-elongata_contig180942.4829.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig180942 71..244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig180942.4829.1 ID=prot_H-elongata_contig180942.4829.1|Name=mRNA_H-elongata_contig180942.4829.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
FYLFFSQDKTEWTVTGGYTVGEFWGLVLQTVCLPGAAVALLTFMVFFYKS
PAWTSWVR
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