prot_H-elongata_contig179290.4752.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA) HSP 1 Score: 116 bits (291), Expect = 3.050e-29 Identity = 54/145 (37.24%), Postives = 90/145 (62.07%), Query Frame = 0
Query: 13 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYR--DSRKQVGLLRKAMYELVHAGLLW 155
W +A+ EM+ W++V++P+ K+ +G R +F K DG IE+YK RLVA+G+ + GI Y+E+ +P +R+VL++ GW+ QLDV A L ++EEE+Y+E+P+ ++ + R +V LL+KA+Y L + W
Sbjct: 6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU) HSP 1 Score: 120 bits (300), Expect = 1.650e-28 Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPE--AYRDSRKQVGLLRKAMYELVHAGLLW 155
EAQ + +WP+W+ AI EMD A + +V RP G V+G+R+VF RK D DG I++ K R+VAQGF ++ G+ Y E+ +P + +R++L++ W QLDV A L D++EEIY+ P A + V LRK++Y L AG W
Sbjct: 993 EAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAW 1147
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY) HSP 1 Score: 119 bits (297), Expect = 3.950e-28 Identity = 60/155 (38.71%), Postives = 96/155 (61.94%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYELVHAGLLW 155
EAQAS +WPQW+RAI EM+ A G + +V +P G V+G+++VF RK + +G + + K R+VAQGF ++ GI + E+ +P + +R+++++ GW QLDV A L D++EEIY+ P + ++ V L+K++Y L AG W
Sbjct: 327 EAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAW 481
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 117 bits (292), Expect = 1.910e-27 Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 0
Query: 13 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYELVHAGLLW 155
W+ A+A E++ W+VV+ P K+ +G + ++ K + DG IE+YK RLVAQGF +++GI Y+E SP +R L+++ A WE Q+DV+ A L D+EEE+Y++LPE ++ + K +V L+K++Y L A W
Sbjct: 565 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 116 bits (290), Expect = 2.650e-27 Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 0
Query: 13 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYELVHAGLLW 155
W+ A+A E++ W+VV+ P K+ +G + ++ K + DG IE+YK RLVAQGF +++GI Y+E+ SP +R L++ A WE Q+DV+ A L D+EEE+Y++LPE ++ + K +V L+K++Y L A W
Sbjct: 96 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI) HSP 1 Score: 116 bits (291), Expect = 2.660e-27 Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVHAGLLW 155
EA+ +WP W+ AI E+ + G W + + P G+R +G++ VF K+ DG ++KYK RLVAQGF + G+ Y+E+ +P A +R+++++ GW Q+DV A L ++EEEIY+ P Y + K V L KA+Y L AG W
Sbjct: 835 EAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDK-VCRLCKALYGLKQAGRTW 986
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI) HSP 1 Score: 115 bits (288), Expect = 6.720e-27 Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 0
Query: 13 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYELVHAGLLW 155
W+ A+A E++ W+VV+ P K+ +G + ++ K + DG IE+YK RLVAQGF +++GI Y+E SP +R L++ A WE Q+DV+ A L D+EEE+Y++LPE ++ + K +V L+K++Y L A W
Sbjct: 819 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A392NJT6_9FABA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NJT6_9FABA) HSP 1 Score: 110 bits (274), Expect = 1.690e-26 Identity = 55/146 (37.67%), Postives = 84/146 (57.53%), Query Frame = 0
Query: 11 PQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYELVHAGLLW 155
P+W+ A+A E+ G W + P GK+++G R V+ K G IEKYK RLVA+G+ +V+G + E+ +P +R +L++ A GWE Q+DV A L D+EEE+Y+++P Y + V LRK++Y L A W
Sbjct: 51 PEWQEAMAIELKALEENGTWDLTLPPPGKKIVGCRWVYKVKYKASGEIEKYKARLVAKGYTQVEGEDFNETFAPVAKMTTVRCLLTVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPNGYDTPKAGMVCRLRKSLYGLKQASRNW 196
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 114 bits (285), Expect = 1.720e-26 Identity = 57/153 (37.25%), Postives = 93/153 (60.78%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVHAGLLW 155
+A + + +W++A E++ GV++ V RP+ ++++G++ VF K DG +EKYK RLVAQGF +V+GI Y E+ +P IR++L++ WE Q+DV A L ++EEEIY+++P ++ S V L+KA+Y L A W
Sbjct: 1000 DAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A438FT54_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FT54_VITVI) HSP 1 Score: 112 bits (281), Expect = 3.890e-26 Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 0
Query: 13 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAY--RDSRKQVGLLRKAMYELVHAGLLW 155
W +A+ E+ W++VE PKG++ +G + V+ K++KDGG++KYK RLVA+G+++ G+ Y+E +P IR+VLSM W QLDV A L ++EEE+Y++ P Y + QV L+KA+Y L A W
Sbjct: 40 WHKAMNEEIGSIEKNNSWELVELPKGQKSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKQEFGVDYKEVFAPVAKLDTIRLVLSMAAQNSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQAPRAW 184 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig179290.4752.1 ID=prot_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bpback to top |