mRNA_H-elongata_contig179290.4752.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig179290.4752.1
Unique NamemRNA_H-elongata_contig179290.4752.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 215 bits (547), Expect = 5.510e-61
Identity = 122/337 (36.20%), Postives = 192/337 (56.97%), Query Frame = 1
Query:   28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAV----RDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKT-SIISSVAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            +P ++ EA  S+EWP+WK AI  EM    + G + +VE PK   ++G++ VF  K + +  IE YK RLVAQGF +V GI + E+ +P    A I ++L++     WE  Q+DV  A L  D+EEEIY++ P    +  K+  V  L++ +Y L  +G  + KK   EL + G  RS+ D CVF W+ N   ++I+++    L V ++T    + AV    R++ + F + DLGE  + LG ++ RDR+  TL+  QH YI  +   F +    S+ + +     LS    P T  + E+M+ IPYR+++G+LM+ A  TRPDI++A   L++F  N
Sbjct:  111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLI---ALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQN 443          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 213 bits (542), Expect = 3.050e-58
Identity = 120/339 (35.40%), Postives = 188/339 (55.46%), Query Frame = 1
Query:    4 GSTRQLDREPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KALSKSDSPQTDPEVEEMRQIP-YRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            G   ++D  P ++ EA+AS EW +WK+A+  EM      G +   + P G+  +G + VF++K D+DG I +YK RLVAQG+ ++ G+ Y E+ +P      +R  L +      E  Q+DV  A L  ++EEEIY+  PE Y D   +V  LRK +Y L  +G  W ++F  +L + GF + +AD CV++ I  G +  II V+VD LL+ + T  D  +   +L + F +KDLGE    +G +I RDR  GT++  Q QYI  +   FG+     +S+      + K    +TD  V +   +  Y+ ++G+L++ A  TRPDIS A  +L +F  N
Sbjct:  870 GDDIKIDNFPRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKK---RTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASN 1204          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GR04_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GR04_9APHY)

HSP 1 Score: 211 bits (537), Expect = 1.070e-57
Identity = 122/332 (36.75%), Postives = 185/332 (55.72%), Query Frame = 1
Query:   28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ-VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KA-LSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            +P T  +A  S +  +W++A   E+    A   W +V  P GKR +G+  VF  K + DG +E+YK RLVA+G+ +  G  Y E  +PT  Q  +R++L++  A   E   +D+  A L  D+EEEIY++ PE +     + V  L K++Y L      W KK    L   GF R Q+D  ++ +I  G V +I+ V++D + +A+ +K+  +  V++L S F ++DLG   + LG  I RD    T++  Q QYI  M E +G++    +S+     A LSK+ +PQT  E E M ++PY   VGALM+ A  TRPDI FA   LA+FN N
Sbjct:  743 DPWTYKQAMGSPDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYI-RGDVHIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDHAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMDPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNAN 1073          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY)

HSP 1 Score: 211 bits (537), Expect = 1.420e-57
Identity = 122/332 (36.75%), Postives = 185/332 (55.72%), Query Frame = 1
Query:   28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ-VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KA-LSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            +P T  +A  S +  +W++A   E+    A   W +V  P GKR +G+  VF  K + DG +E+YK RLVA+G+ +  G  Y E  +PT  Q  +R++L++  A   E   +D+  A L  D+EEEIY++ PE +     + V  L K++Y L      W KK    L   GF R Q+D  ++ +I    V +I+ V++D + +A+ +K+  +  V++L S F ++DLG   + LG  I RDR   T++  Q QYI  M E +G++    +S+     A LSK+ +PQT  E E M ++PY   VGALM+ A  TRPDI FA   LA+FN N
Sbjct:  883 DPRTYKQAMGSPDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYIRED-VRIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNAN 1213          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GXP1_9APHY (Integrase catalytic domain-containing protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXP1_9APHY)

HSP 1 Score: 209 bits (533), Expect = 3.110e-57
Identity = 122/331 (36.86%), Postives = 183/331 (55.29%), Query Frame = 1
Query:   31 PTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQ-VGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KA-LSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            P T  +A  SS+  +W++A   E+    A   W +V  P GKR +G+  VF  K + DG +E YK RLVA+G+ +  G  Y E  +PT  Q  + ++L++  A   E R +D+  A L  D+EEEIY++ PE +     + V  L K++Y L      W KK    L   GF   Q+D  ++ +I  G V +I+ V++D + +A+ +K+  +  V++  S F ++DLG   + LG  I RDR   T++  Q QYI  M EH+G++    +S+     A LSK+ +PQT  E E M ++PY   VGALM+ A  T PDI FA   LA+FN N
Sbjct:  485 PRTYKQAMGSSDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVEHYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALHLILALAAAEDLELRSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTHLQSDRSIYVYI-RGDVRIIVPVFIDDMTLASKSKKALDDTVKESKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLEHYGLSDCKSVSTPMDPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTCPDIMFAIGCLARFNAN 814          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A401GDH6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GDH6_9APHY)

HSP 1 Score: 201 bits (511), Expect = 5.370e-57
Identity = 109/330 (33.03%), Postives = 181/330 (54.85%), Query Frame = 1
Query:   28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            EP T+ +A+ S EWP+W++A+  E++       W++VE P+ ++ +G + V ++K +K+G I KYK RLVA+G+ ++ G+ Y E+ +P      IR +L +   L WE  Q+DV  A L   ++EE+Y+  PE Y D    +  L+K +Y L  +G  W      +L   GF+R  +DPC +  I  G  I I+ ++VD LL+        +Q  R+L + F + DLGE    +G +I RD +  T+   Q +YI ++    G+T  + +        + + + P+TD E +  R   Y  ++G+LM+TA +TRPDI+     L+ F  N
Sbjct:  105 EPKTLSDAKRSLEWPKWEQAVQTELNQLQGMETWELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFTPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYCICKLKKTLYRLKQSGREWNIVLNRKLLDVGFKRLFSDPCAYIQI-KGDKIEIVTIWVDDLLIFTNDCALMDQLKRELQNMFEVTDLGEPQKIVGIEIERDHSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKEEPETDDECD--RDNGYASLIGSLMYTAIVTRPDIAHPVQWLSSFTAN 431          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 209 bits (532), Expect = 6.680e-57
Identity = 122/333 (36.64%), Postives = 190/333 (57.06%), Query Frame = 1
Query:   37 TMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEA--DVEEEIYVELPE--AYRDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVT--KTSIISSVAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            T+ EA+   +WP+W  AI  E++     G W++V+RP    V+G++ V   K D  G I+KYK RLVAQGF ++ GI Y E+ +P    + IR++L++    GW+ +  D + A L +  D +E IY+E P   A +D +  V  LRKA+Y L   G  W +   I L   GF R+++D  VF + ++   I ++ ++VD   +  ++     +  R +   +P+ DLGE S+ LG +++RDR A TL+  QH YI ++   F  T  K S I      + L+KS  P +  ++  MR+IPYR+ +G+LM+ A  TRPDISFA   LA+F+ N
Sbjct:  965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVF-FAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQN 1295          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A4S4MA66_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MA66_9APHY)

HSP 1 Score: 198 bits (503), Expect = 1.640e-56
Identity = 113/316 (35.76%), Postives = 173/316 (54.75%), Query Frame = 1
Query:   76 WKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISS-VAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            W  A   E +   A G W+V   P G   +G + VF+ K   DG +++YK RLVA+GF +  G  Y E+ +PT   A +R++L++      E    D+  A +  D++ EIY++ PE ++      V  +RK +Y L  AG LW +K    L + GF R +AD  V+ +   G+  VII ++VD + +   +K + EQ + +L   F ++ LG+ S+ LG +I RDR   +L+  Q QY+  M + FG +  S +S+ +   K L      +T  E +EM+ IPY   VGALM+ AT TRPDI+F    LA+FN N
Sbjct:   20 WTAAALDEYNNLIANGTWEVTSLPPGFHAIGCKWVFLTKYLADGSVDRYKARLVAKGFSQRPGFDYVETFAPTVRMATLRIILALAALENLEIVSTDISQAFINGDLDVEIYMQQPEGFKHGNPGDVLRIRKGLYGLKQAGRLWNQKLNAALLSIGFLRVKADASVYVY-ARGSCRVIIPIHVDDITLVGPSKPEIEQIISELSQHFKLRVLGDTSWLLGIEIIRDRAKCSLSLSQRQYVVNMLDRFGFSSCSPVSTPMEPGKRLGPDQCARTFAEQQEMQAIPYINAVGALMYLATSTRPDIAFTVSTLARFNCN 334          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE)

HSP 1 Score: 201 bits (510), Expect = 8.260e-56
Identity = 122/332 (36.75%), Postives = 182/332 (54.82%), Query Frame = 1
Query:   28 EPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGL-LRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISS-VAG*KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            EP T  +A  S    QW+ A+  EM    + G W +VE P G++ +G++ V+  K   DG IE++K RLVA+GF +  G  Y E+ + T  Q  +R VL++        R +D+  A + +D++ EIY+  PE +R    ++   L K++Y L  A  LW +K GI               ++Q   N  V VI+ V+VD + +A+ ++   ++ V  L   F ++DLG  SY LG +I+R+R    L   Q QYI    E FG+T     ++ +     LSKS SPQT  EVEEM +IPY   VG+L++ ATMTRPDI++ A  LA+FN N
Sbjct:  103 EPVTYRQAITSPNAEQWQEAMIEEMTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIY--------------IYQ---NDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSN 417          
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Match: A0A2N9IT45_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IT45_FAGSY)

HSP 1 Score: 202 bits (513), Expect = 8.880e-56
Identity = 117/339 (34.51%), Postives = 189/339 (55.75%), Query Frame = 1
Query:   25 REPTTMGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMRKIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITALGWETRQLDVDMACLEADVEEEIYVELPEAY--RDSRKQVGLLRKAMYELVHAGLLW*KKFGIELEAKGFQRSQADPCVFQWILNGAVIVIIVVYVDGLLVANATKRDDEQAVRDLCSCFPIKDLGEASYYLGCQISRDRNAGTLTFDQHQYIHTMAEHFGVTKTSIISSVAG*------KALSKSDSPQTDPEVEEMRQIPYRKIVGALMWTATMTRPDISFAALQLAKFNDN 1017
            ++P+T  +A    +  +W  A+  E D     GVW++V+R +G +V+G + +F RK D  G +EK+K RLVA+G+ +  G+ +EE+ SP      IR +LS++    +E  Q+DV  A L  D+EE++Y+E PE +  +    +V  L K++Y L  A   W  KF   +   GF ++ ++PCV+   ++  V VI+ +YVD +L+A       ++  + L   F +KDLGEASY LG +I RDR    L+  Q  YI T+ E F      ++  ++G       ++LS+ D P+ D E  + +  PY   VG+LM+    TRPDI+FA   +++F  N
Sbjct:  329 KDPSTYSQAIKDFDSKKWISAMNEEFDSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKV-VILTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLGEASYILGIKIERDRVNRKLSLSQENYIDTLLEKF-----HMVDCLSGRIPYNNLRSLSQKDCPKNDQETLDPKLYPYASAVGSLMYLMICTRPDIAFAVGMVSRFQSN 661          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179290.4752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GP19_9APHY5.510e-6136.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS3.050e-5835.40Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A401GR04_9APHY1.070e-5736.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A401H1G1_9APHY1.420e-5736.75Integrase catalytic domain-containing protein n=7 ... [more]
A0A401GXP1_9APHY3.110e-5736.86Integrase catalytic domain-containing protein n=2 ... [more]
A0A401GDH6_9APHY5.370e-5733.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6PCF8_9APHY6.680e-5736.64Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A4S4MA66_9APHY1.640e-5635.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
E2LZP6_MONPE8.260e-5636.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9IT45_FAGSY8.880e-5634.51Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179290contigH-elongata_contig179290:268..1284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score113.2
Seed ortholog evalue1.1e-22
Seed eggNOG ortholog102107.XP_008237389.1
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1017
Cds size468
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179290.4752.1prot_H-elongata_contig179290.4752.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig179290 307..774 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930035.4462624-UTR-H-elongata_contig179290:267..3061622930035.4462624-UTR-H-elongata_contig179290:267..306Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig179290 268..306 +
1691679255.8644319-UTR-H-elongata_contig179290:267..3061691679255.8644319-UTR-H-elongata_contig179290:267..306Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig179290 268..306 +
1622930035.4719605-UTR-H-elongata_contig179290:774..12841622930035.4719605-UTR-H-elongata_contig179290:774..1284Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig179290 775..1284 +
1691679255.8919973-UTR-H-elongata_contig179290:774..12841691679255.8919973-UTR-H-elongata_contig179290:774..1284Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig179290 775..1284 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930035.460233-CDS-H-elongata_contig179290:306..7741622930035.460233-CDS-H-elongata_contig179290:306..774Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig179290 307..774 +
1691679255.8792112-CDS-H-elongata_contig179290:306..7741691679255.8792112-CDS-H-elongata_contig179290:306..774Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig179290 307..774 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig179290.4752.1

>prot_H-elongata_contig179290.4752.1 ID=prot_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKRAIAHEMDGQTARGVWQVVERPKGKRVLGTRVVFMR
KIDKDGGIEKYKCRLVAQGFRKVKGIHYEESSSPTPAQAIIRMVLSMITA
LGWETRQLDVDMACLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYELVH
AGLLW*
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mRNA from alignment at H-elongata_contig179290:268..1284+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig179290.4752.1 ID=mRNA_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1017bp|location=Sequence derived from alignment at H-elongata_contig179290:268..1284+ (Himanthalia elongata Himel1 dioecious)
TACGGGTCCACGAGGCAGCTAGACCGAGAGCCGACAACCATGGGCGAGGC GCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAGGGCGATCGCGCACGAGA TGGATGGGCAAACTGCTCGGGGCGTGTGGCAGGTGGTGGAGCGCCCAAAA GGGAAGAGGGTGTTGGGCACGAGAGTAGTTTTCATGCGCAAAATAGACAA GGATGGAGGGATCGAGAAGTACAAATGTCGTCTTGTGGCGCAGGGTTTCA GGAAGGTCAAAGGCATACACTACGAGGAATCCTCCTCTCCGACTCCTGCG CAGGCCATCATTAGGATGGTACTCAGCATGATCACGGCTCTCGGCTGGGA GACGCGGCAGCTGGACGTCGACATGGCCTGTCTGGAGGCCGATGTGGAGG AGGAGATCTACGTTGAGCTCCCGGAGGCATACCGTGACTCCAGGAAGCAA GTCGGCCTACTAAGGAAAGCAATGTACGAACTTGTTCACGCCGGGCTGCT GTGGTAAAAAAAGTTCGGGATCGAGCTCGAGGCGAAGGGTTTCCAGAGAT CTCAAGCCGACCCATGCGTGTTCCAGTGGATTCTCAACGGGGCAGTGATA GTCATCATCGTGGTCTACGTCGACGGCCTGCTGGTTGCTAATGCAACGAA ACGTGACGATGAGCAAGCGGTGAGGGACTTGTGCTCCTGTTTCCCCATCA AGGATCTGGGGGAGGCTTCGTATTACCTGGGATGCCAAATCTCGCGGGAC CGGAACGCTGGGACACTGACGTTCGACCAGCATCAGTACATACATACTAT GGCGGAACATTTTGGCGTGACGAAGACCAGCATCATCTCGTCCGTGGCAG GATGAAAAGCCCTTTCGAAATCAGACAGCCCGCAAACGGACCCAGAGGTT GAAGAAATGCGCCAGATTCCCTACCGAAAAATCGTTGGGGCCCTAATGTG GACAGCGACGATGACCAGGCCCGACATTTCATTCGCTGCGCTCCAACTGG CGAAATTCAATGACAAC
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Coding sequence (CDS) from alignment at H-elongata_contig179290:268..1284+

>mRNA_H-elongata_contig179290.4752.1 ID=mRNA_H-elongata_contig179290.4752.1|Name=mRNA_H-elongata_contig179290.4752.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig179290:268..1284+ (Himanthalia elongata Himel1 dioecious)
ATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAGGGCGAT
CGCGCACGAGATGGATGGGCAAACTGCTCGGGGCGTGTGGCAGGTGGTGG
AGCGCCCAAAAGGGAAGAGGGTGTTGGGCACGAGAGTAGTTTTCATGCGC
AAAATAGACAAGGATGGAGGGATCGAGAAGTACAAATGTCGTCTTGTGGC
GCAGGGTTTCAGGAAGGTCAAAGGCATACACTACGAGGAATCCTCCTCTC
CGACTCCTGCGCAGGCCATCATTAGGATGGTACTCAGCATGATCACGGCT
CTCGGCTGGGAGACGCGGCAGCTGGACGTCGACATGGCCTGTCTGGAGGC
CGATGTGGAGGAGGAGATCTACGTTGAGCTCCCGGAGGCATACCGTGACT
CCAGGAAGCAAGTCGGCCTACTAAGGAAAGCAATGTACGAACTTGTTCAC
GCCGGGCTGCTGTGGTAAATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCC
GCAATGGAAAAGGGCGATCGCGCACGAGATGGATGGGCAAACTGCTCGGG
GCGTGTGGCAGGTGGTGGAGCGCCCAAAAGGGAAGAGGGTGTTGGGCACG
AGAGTAGTTTTCATGCGCAAAATAGACAAGGATGGAGGGATCGAGAAGTA
CAAATGTCGTCTTGTGGCGCAGGGTTTCAGGAAGGTCAAAGGCATACACT
ACGAGGAATCCTCCTCTCCGACTCCTGCGCAGGCCATCATTAGGATGGTA
CTCAGCATGATCACGGCTCTCGGCTGGGAGACGCGGCAGCTGGACGTCGA
CATGGCCTGTCTGGAGGCCGATGTGGAGGAGGAGATCTACGTTGAGCTCC
CGGAGGCATACCGTGACTCCAGGAAGCAAGTCGGCCTACTAAGGAAAGCA
ATGTACGAACTTGTTCACGCCGGGCTGCTGTGGTAA
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