prot_H-elongata_contig179228.4746.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179228.4746.1
Unique Nameprot_H-elongata_contig179228.4746.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: D7FX78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.920e-21
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 0
Query:    1 QVGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIVDDRE 48
            +VGLKALYEIAK+KNAE HSVLLPLESVC+SVRATALSMGLEIVDDRE
Sbjct:   98 KVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRE 145          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: A0A7S1BAR1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAR1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.260e-6
Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIVDDR 47
            + ++A+YEIAKIK  + H   +P+ SV +S+  TALSMG+E++DD+
Sbjct:  100 IRVEAVYEIAKIKVQDTHLADMPIRSVAKSIVGTALSMGVEVIDDK 145          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: A0A0D6R8R4_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R8R4_ARACU)

HSP 1 Score: 51.6 bits (122), Expect = 1.340e-6
Identity = 22/43 (51.16%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIV 44
            + LK +YEIAK+K ++ +S  +PLES+C+S+ ATA +MG++IV
Sbjct:  109 LSLKHVYEIAKVKQSDPYSQNMPLESICKSIIATARTMGIQIV 151          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: W9RKA1_9ROSA (60S ribosomal protein L19 n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RKA1_9ROSA)

HSP 1 Score: 50.1 bits (118), Expect = 2.540e-6
Identity = 22/47 (46.81%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIVDDRE 48
            + +K +YEIAKIK ++     +PLES+C+S+ ATA SMG+++V+  E
Sbjct:   66 LSVKHIYEIAKIKQSDPFCQYMPLESICKSIIATANSMGIKVVNHLE 112          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: M2XF01_GALSU (50S ribosomal protein L11 (Mitochondrial) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XF01_GALSU)

HSP 1 Score: 49.7 bits (117), Expect = 6.480e-6
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 QVGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEI 43
            +V LKA+YEI KIK  ++H     LE +CRS+ ATA  MGLE+
Sbjct:  104 KVPLKAIYEIGKIKQRDEHMKYKSLEIICRSIYATAKGMGLEV 146          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: A0A7S1T4C2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T4C2_9RHOD)

HSP 1 Score: 49.7 bits (117), Expect = 8.770e-6
Identity = 20/49 (40.82%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIVDDREHE 50
            V ++A+YEIA+IK  ++H   +PLE +C+S+  TA + GL+++ DR+++
Sbjct:  113 VPIQAVYEIARIKQQDEHLRHVPLEGLCKSILGTATTCGLQVLFDRDYK 161          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: A0A0W4ZVT1_PNEJ7 (Ribosomal protein L11 n=1 Tax=Pneumocystis jirovecii (strain RU7) TaxID=1408657 RepID=A0A0W4ZVT1_PNEJ7)

HSP 1 Score: 49.3 bits (116), Expect = 8.970e-6
Identity = 23/43 (53.49%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIV 44
            + LK +YEIAKIK+ +++   +PLESVCRSV A+A S+G+++V
Sbjct:  103 LSLKHIYEIAKIKHKDENIQGIPLESVCRSVIASAKSVGIKVV 145          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: A0A1D2VJ24_9ASCO (Ribosomal protein L11 n=1 Tax=Ascoidea rubescens DSM 1968 TaxID=1344418 RepID=A0A1D2VJ24_9ASCO)

HSP 1 Score: 49.3 bits (116), Expect = 9.520e-6
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEI 43
            V LK +YEIAKIK  +Q+   L LE++C+S+ ATA SMG+E+
Sbjct:  107 VSLKHIYEIAKIKKTDQNHENLNLEAICKSIIATAKSMGVEV 148          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: A0A7S2CHZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.620e-5
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 QVGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIVDDR 47
            +V LK ++EIAKIK  ++H   +PL  +CRS+  TA SMG+ ++ D+
Sbjct:  109 EVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155          
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Match: B0CYU6_LACBS (Predicted protein n=2 Tax=Laccaria TaxID=29882 RepID=B0CYU6_LACBS)

HSP 1 Score: 48.5 bits (114), Expect = 1.820e-5
Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    2 VGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIV 44
            + LK +YEIAKIK+A++H   LPLES+ R +  +A S+G+++V
Sbjct:  105 ITLKHVYEIAKIKSADEHMKSLPLESIARMIVGSARSLGIQVV 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179228.4746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FX78_ECTSI1.920e-2191.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1BAR1_9STRA1.260e-647.83Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A0D6R8R4_ARACU1.340e-651.16Uncharacterized protein n=1 Tax=Araucaria cunningh... [more]
W9RKA1_9ROSA2.540e-646.8160S ribosomal protein L19 n=2 Tax=Morus notabilis ... [more]
M2XF01_GALSU6.480e-653.4950S ribosomal protein L11 (Mitochondrial) n=1 Tax=... [more]
A0A7S1T4C2_9RHOD8.770e-640.82Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A0W4ZVT1_PNEJ78.970e-653.49Ribosomal protein L11 n=1 Tax=Pneumocystis jirovec... [more]
A0A1D2VJ24_9ASCO9.520e-654.76Ribosomal protein L11 n=1 Tax=Ascoidea rubescens D... [more]
A0A7S2CHZ2_9STRA1.620e-544.68Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B0CYU6_LACBS1.820e-548.84Predicted protein n=2 Tax=Laccaria TaxID=29882 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 1..45
e-value: 3.3E-12
score: 48.3
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 2..46
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 2..43
e-value: 2.8E-10
score: 40.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179228contigH-elongata_contig179228:988..1158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179228.4746.1mRNA_H-elongata_contig179228.4746.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179228 988..1158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179228.4746.1 ID=prot_H-elongata_contig179228.4746.1|Name=mRNA_H-elongata_contig179228.4746.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
QVGLKALYEIAKIKNAEQHSVLLPLESVCRSVRATALSMGLEIVDDREHE
NKIKVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036769Ribosomal_L11_C_sf
IPR020783Ribosomal_L11_C