prot_H-elongata_contig17776.4680.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17776.4680.1
Unique Nameprot_H-elongata_contig17776.4680.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length113
Homology
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: D8LM34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM34_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 4.280e-36
Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    1 MQYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKVTEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEK 98
            MQYVKKDKLTELLAEKLC RL ASET RQ + VSYCLGQLKVTEKAVSRLAEL+PTYK+KLQD +V++NF  +V R K FA+ EM +A+ EW+AQL K
Sbjct: 1240 MQYVKKDKLTELLAEKLCARLAASETDRQARAVSYCLGQLKVTEKAVSRLAELVPTYKEKLQDDEVFNNFKTVVLRTKSFATLEMKEAVAEWEAQLRK 1337          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A7S4MY57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MY57_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.040e-14
Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 0
Query:    1 MQYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKVTEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQL 96
            + ++KKD+ TE+L +KLC R     T  Q   ++YCL  LKV +K V  L +    YKD L D+DVY +F  +V++AK+F+  EM + ++E++ +L
Sbjct:  967 LSFIKKDRQTEMLVDKLCQRFPKCTTISQKADLAYCLSNLKVNDKCVKCLNDHFKLYKDALFDEDVYRSFSAIVSKAKKFSKPEMKEPVEEFETKL 1062          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A507DVL0_9FUNG (Condensin complex subunit 1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DVL0_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 2.100e-11
Identity = 35/105 (33.33%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    1 MQYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLK-VTEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEKVKNRML 104
            ++++KKDK TE + EKLC R   ++T RQ + +S+CL  L   ++K+V +L E +P Y+DKL +  +Y +   ++ +AK+ A  E    I++++ +L++ +N+ +
Sbjct: 1128 LEFIKKDKQTENIVEKLCLRFRNADTERQWRDISFCLTLLSFASDKSVKKLIEHLPQYQDKLHEPVLYKHLEDILAKAKKVAKTETKTMIEDFEVKLKECRNKCV 1232          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A0L0H9H9_SPIPD (Condensin complex subunit 1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H9H9_SPIPD)

HSP 1 Score: 65.9 bits (159), Expect = 3.440e-10
Identity = 33/105 (31.43%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    1 MQYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLK-VTEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEKVKNRML 104
            + ++KKDK TE + EKLC R   ++  RQ + +S+CL  L   ++K+V +L E +P ++DKL +  +Y +F  ++ +AK+ A  E    I++++ +L+++  + +
Sbjct: 1138 LDFIKKDKQTENIVEKLCLRFRNADGPRQWRDISFCLSLLSFASDKSVKKLVEHLPHFQDKLHEPVLYKHFQDILGKAKKVAKPETKTLIEDFEVKLQELHEKCV 1242          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A177W8G6_BATDL (Condensin complex subunit 1 n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177W8G6_BATDL)

HSP 1 Score: 65.5 bits (158), Expect = 4.680e-10
Identity = 31/100 (31.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    2 QYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKV-TEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQ-EMVQAIDEWKAQLEKV 99
            +++K+D+ +E + +KLC R   + T RQ Q +++CL  +   TEK++ +L + +P Y+DKL  + VY  F  ++ + K+   + E+ Q +DE++  L+++
Sbjct: 1028 EFIKQDRQSESIIDKLCARFCNANTERQWQDIAFCLSLISFSTEKSLKKLVDALPMYQDKLHPEKVYKYFTDIIKKVKKIPGKPELKQMVDEYEKTLQEL 1127          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: F4NUE3_BATDJ (Protoporphyrinogen oxidase n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4NUE3_BATDJ)

HSP 1 Score: 65.5 bits (158), Expect = 4.760e-10
Identity = 31/100 (31.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    2 QYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKV-TEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQ-EMVQAIDEWKAQLEKV 99
            +++K+D+ +E + +KLC R   + T RQ Q +++CL  +   TEK++ +L + +P Y+DKL  + VY  F  ++ + K+   + E+ Q +DE++  L+++
Sbjct: 1675 EFIKQDRQSESIIDKLCARFCNANTERQWQDIAFCLSLISFSTEKSLKKLVDALPMYQDKLHPEKVYKYFTDIIKKVKKIPGKPELKQMVDEYEKTLQEL 1774          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A1X7V9Q3_AMPQE (Condensin complex subunit 1 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V9Q3_AMPQE)

HSP 1 Score: 65.1 bits (157), Expect = 6.400e-10
Identity = 32/102 (31.37%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    1 MQYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKVTEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEKVKNR 102
            + +VKK++ +E L EKLC R  A+ T +Q + +++CL QL V E+ + +L E +P Y+  L D +VY++ +  V++ K+ A  +     +E++ +L  + ++
Sbjct: 1086 LSFVKKERQSEGLVEKLCHRFRATRTEQQSRDLAFCLSQLNVNERGLRKLHENLPCYQGLLSDTEVYNSLLTAVSKGKKLAKGDKKPMYEEFETKLADIHHK 1187          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A507BT70_9FUNG (Condensin complex subunit 1 n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BT70_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 4.150e-9
Identity = 37/105 (35.24%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    3 YVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKVT-EKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEKVKNRMLGQ 106
            ++KK+K TE L EKL  R   ++T RQ + +++CLG L  + EK++ +L E M  Y+DKL +  V+ +F  +V++AK+    E   +I+E++ +L ++  + L Q
Sbjct: 1140 FIKKEKQTESLVEKLVLRFKNADTDRQCRDIAFCLGLLPFSSEKSIKKLVEGMGHYQDKLYEPTVWKHFQEIVSKAKKQPKTENKASIEEFERKLIELHEKCLEQ 1244          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A1S8VW18_9FUNG (Condensin complex subunit 1 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VW18_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 5.670e-9
Identity = 33/97 (34.02%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    2 QYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLK-VTEKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQ-EMVQAIDEWKAQL 96
            +++KKDK +E + +KL  R   ++T RQ Q ++YC+  L   TEK+  +L + +P Y+DKL  + VY  F  ++ + K+   + E+ Q  DE++  L
Sbjct: 1185 EFIKKDKQSESIIDKLTVRFRNADTERQWQHIAYCMSLLSFATEKSFKKLVDALPMYQDKLHPEKVYKYFTDIIKKVKKVPGKPELKQQADEFEKTL 1281          
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Match: A0A507CTP5_9FUNG (Condensin complex subunit 1 n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CTP5_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 4.990e-8
Identity = 32/105 (30.48%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    3 YVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKVT-EKAVSRLAELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEKVKNRMLGQ 106
            ++KKDK TE + EKL  R   ++T RQ + +++CL  L  + EK++ +L + +P Y+DKL +  V+ +F  ++++AK+    +    ++E++ +L  ++ + L Q
Sbjct: 1163 FIKKDKQTENIVEKLVLRFKNADTDRQCRDIAFCLASLPFSSEKSIKKLVDGIPHYQDKLYEPTVWKHFQDILSKAKKAPRTDGKTILEEFERRLADLREKALEQ 1267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17776.4680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LM34_ECTSI4.280e-3673.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4MY57_9STRA3.040e-1439.58Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A507DVL0_9FUNG2.100e-1133.33Condensin complex subunit 1 n=1 Tax=Powellomyces h... [more]
A0A0L0H9H9_SPIPD3.440e-1031.43Condensin complex subunit 1 n=2 Tax=Spizellomyces ... [more]
A0A177W8G6_BATDL4.680e-1031.00Condensin complex subunit 1 n=1 Tax=Batrachochytri... [more]
F4NUE3_BATDJ4.760e-1031.00Protoporphyrinogen oxidase n=1 Tax=Batrachochytriu... [more]
A0A1X7V9Q3_AMPQE6.400e-1031.37Condensin complex subunit 1 n=1 Tax=Amphimedon que... [more]
A0A507BT70_9FUNG4.150e-935.24Condensin complex subunit 1 n=1 Tax=Synchytrium mi... [more]
A0A1S8VW18_9FUNG5.670e-934.02Condensin complex subunit 1 n=1 Tax=Batrachochytri... [more]
A0A507CTP5_9FUNG4.990e-830.48Condensin complex subunit 1 n=1 Tax=Synchytrium en... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 2..102
IPR007673Condensin subunit 1PANTHERPTHR14222:SF2CONDENSIN COMPLEX SUBUNIT 1coord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17776contigH-elongata_contig17776:271..1212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17776.4680.1mRNA_H-elongata_contig17776.4680.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17776 265..1212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17776.4680.1 ID=prot_H-elongata_contig17776.4680.1|Name=mRNA_H-elongata_contig17776.4680.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MQYVKKDKLTELLAEKLCTRLVASETTRQGQLVSYCLGQLKVTEKAVSRL
AELMPTYKDKLQDKDVYSNFVGLVNRAKQFASQEMVQAIDEWKAQLEKVK
NRMLGQSTRPGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3
IPR007673Condensin_cplx_su1