prot_H-elongata_contig17702.4643.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17702.4643.1
Unique Nameprot_H-elongata_contig17702.4643.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length507
Homology
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BLAST of mRNA_H-elongata_contig17702.4643.1 vs. uniprot
Match: A0A6H5J7V5_9PHAE (VHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7V5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.980e-34
Identity = 92/174 (52.87%), Postives = 114/174 (65.52%), Query Frame = 0 
Query:    1 MLEQVLQAAESRAEVRDSEIATELLEQLKAMGPKITRIIEDNAEGDPAMLGALFKVNDAVDNTLQLHKDVVDGGKSVPLLPPSRHSSGVDAVADGMDKLSVGQAVGSRAES---KSRRSVPKLAGPRSGKKGQGKGIQVQGAAGPKP---------LDLLSGFELEGSSNDALN 162
            MLEQVLQAAESRAEVRDS+I  E++EQLK  GPKI+ IIE N EGD AML ALFKVNDAVD+TL+L++DVVDG KSVPLLPPS +SS + A++  M+ LS+GQ  G+RA +   K   +VP L+                                +DLLSGFEL+G+SN  +N
Sbjct:  259 MLEQVLQAAESRAEVRDSDITAEVVEQLKQTGPKISGIIEANGEGDAAMLEALFKVNDAVDSTLRLYQDVVDGVKSVPLLPPSSYSSNIGAISGRMEGLSIGQVAGARAAASKLKKTAAVPTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTVDLLSGFELDGASNSNVN 432
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17702.4643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7V5_9PHAE3.980e-3452.87VHS domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038425GAT domain superfamilyGENE3D1.20.58.160coord: 1..75
e-value: 8.0E-6
score: 28.1
IPR004152GAT domainPFAMPF03127GATcoord: 2..73
e-value: 2.2E-10
score: 40.7
IPR004152GAT domainPROSITEPS50909GATcoord: 1..72
score: 10.369
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17702contigH-elongata_contig17702:1252..6985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17702.4643.1mRNA_H-elongata_contig17702.4643.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17702 57..7344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17702.4643.1 ID=prot_H-elongata_contig17702.4643.1|Name=mRNA_H-elongata_contig17702.4643.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=507bp
MLEQVLQAAESRAEVRDSEIATELLEQLKAMGPKITRIIEDNAEGDPAML
GALFKVNDAVDNTLQLHKDVVDGGKSVPLLPPSRHSSGVDAVADGMDKLS
VGQAVGSRAESKSRRSVPKLAGPRSGKKGQGKGIQVQGAAGPKPLDLLSG
FELEGSSNDALNTKNRAVEGAAEVFSAAASTTDNIFAEFGAPAMATATGS
QGGMMATSGQVVEQQLQQPLQQPLQQQPQQQPRPAQLGARTAADKAQSLL
DNLGALYAGGSSTRNVALDKFEPAGSASDRRFSSFSDAGSGIATSIAQQT
SPFDAISALGVQPQQQQQQAYQHSGHAAQGSVERSESSWGLQGPFHPQPS
QVLQQPPQPLQGYHEPQQQPLPQPPQVLQEPPQLLQGYQEPQQQPQAFQP
QPQDFQQQLSQGFQQQPQDFQHQPQDFTQQPQAFQQQLQDFHQQPQDFHQ
QPQAFQQQPHAFQQQPQGFHQPPQAFQQQTQTSQHQPEAFQQQPQAFQHP
RHQQQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038425GAT_sf
IPR004152GAT_dom