mRNA_H-elongata_contig17702.4643.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17702.4643.1
Unique NamemRNA_H-elongata_contig17702.4643.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17702.4643.1 vs. uniprot
Match: A0A6H5J7V5_9PHAE (VHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7V5_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.140e-65
Identity = 171/296 (57.77%), Postives = 198/296 (66.89%), Query Frame = 1 
Query:    1 AIPPAQREFPLFVETYHGLRAEGLPFKQQYQPDRPPVLDPGGGSLLDRR-----AYAAPGVAFEGGGGRGRVGQGGGESXXXXXXXXXXXXXXXDNASVHDELGALSVSDREIVATGASCSEMLEQVLQAAESRAEVRDSEIATELLEQLKAMGPKITRIIEDNAEGDPAMLGALFKVNDAVDNTLQLHKDVVDGGKSVPLLPPSRHSSGVDAVADGMDKLSVGQAVGSRAES---KSRRSVPKLAGPRSGKKGQGKGIQVQGAAGPKP---------LDLLSGFELEGSSNDALN 837
            A  P +REFPLFVETYH LRAEGLPF  QYQ DRPPVLDPG GSLLDR      A AA G    G      V Q G  + XXXXXXXXXXXXX   +S  ++L  LSVSDREIVATGASCSEMLEQVLQAAESRAEVRDS+I  E++EQLK  GPKI+ IIE N EGD AML ALFKVNDAVD+TL+L++DVVDG KSVPLLPPS +SS + A++  M+ LS+GQ  G+RA +   K   +VP L+                                +DLLSGFEL+G+SN  +N
Sbjct:  140 AFLPRRREFPLFVETYHELRAEGLPFSAQYQSDRPPVLDPGAGSLLDRPDGQAGATAAAGATASGVVVATAVPQSGERAAXXXXXXXXXXXXX---SSPPNDLRELSVSDREIVATGASCSEMLEQVLQAAESRAEVRDSDITAEVVEQLKQTGPKISGIIEANGEGDAAMLEALFKVNDAVDSTLRLYQDVVDGVKSVPLLPPSSYSSNIGAISGRMEGLSIGQVAGARAAASKLKKTAAVPTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTVDLLSGFELDGASNSNVN 432
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BLAST of mRNA_H-elongata_contig17702.4643.1 vs. uniprot
Match: A0A835YSD0_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.860e-10
Identity = 71/214 (33.18%), Postives = 98/214 (45.79%), Query Frame = 1 
Query:    1 AIPPAQREFPLFVETYHGLRAEGLPFKQQYQPDRPPVLDP-GGGSLLDRRAYAAPGVAFEGGGGRGRVGQGGGESXXXXXXXXXXXXXXXDNASVHDE-----------------------LGALSVSDREIVATGASCSEMLEQVLQAAESRAEVRDSEIATELLEQLKAMGPKITRIIEDNAEGDPAMLGALFKVNDAVDNTLQLHKDVVDG 570
            A  P +RE PLFVETYH LR +GLPF  QY+ DR PVL+P G GSLLD +   A          RG         XXXXX            A+V+                         +  L      + A  A+  E  ++++ +AE+ AE+    +  +L  Q +A+ P++  +IE  AE  PA+L  LF  NDA+D  L   K  +DG
Sbjct:  145 AFLPQRRELPLFVETYHRLRKDGLPFDAQYKADRAPVLEPVGPGSLLDHQQPEAQ---------RGXXXXXXXXXXXXXXARPHAAGLEGLTAAVYAHGTDKAAGGRTWRFLQCGWTVVVFIVTLQAQAYGVAAGVAAAKE--KELVDSAEAAAEML---MMADLAAQTEALQPRVVALIEARAEASPALLERLFAANDALDAALAARKAALDG 344
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17702.4643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7V5_9PHAE1.140e-6557.77VHS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YSD0_9STRA9.860e-1033.18VHS domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17702contigH-elongata_contig17702:57..7344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score118.2
Seed ortholog evalue1.1e-23
Seed eggNOG ortholog2880.D7FWE4
Preferred nameGGA2
KEGG koko:K12346,ko:K12404,ko:K20524
KEGG TC2.A.55.1
KEGG Pathwayko04142,map04142
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0005856,GO:0005938,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006896,GO:0006897,GO:0006996,GO:0007010,GO:0007015,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009987,GO:0012505,GO:0015031,GO:0015629,GO:0015833,GO:0016043,GO:0016192,GO:0016197,GO:0016482,GO:0019538,GO:0019941,GO:0030029,GO:0030036,GO:0030163,GO:0030479,GO:0030863,GO:0030864,GO:0031984,GO:0032182,GO:0032509,GO:0032511,GO:0033036,GO:0033365,GO:0034613,GO:0035091,GO:0042886,GO:0043130,GO:0043162,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043328,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0061645,GO:0070273,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0097435,GO:0098657,GO:0098791,GO:0099568,GO:1901564,GO:1901565,GO:1901575,GO:1901981
EggNOG free text desc.intracellular protein transport
EggNOG OGsKOG1087@1,KOG1087@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04131
Hectar predicted targeting categoryother localisation
Exons9
Model size2231
Cds size1521
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930024.3408525-UTR-H-elongata_contig17702:56..3631622930024.3408525-UTR-H-elongata_contig17702:56..363Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17702 57..363 +
1691679250.8790781-UTR-H-elongata_contig17702:56..3631691679250.8790781-UTR-H-elongata_contig17702:56..363Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17702 57..363 +
1622930024.3588696-UTR-H-elongata_contig17702:1207..12511622930024.3588696-UTR-H-elongata_contig17702:1207..1251Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17702 1208..1251 +
1691679250.8933387-UTR-H-elongata_contig17702:1207..12511691679250.8933387-UTR-H-elongata_contig17702:1207..1251Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17702 1208..1251 +
1622930024.5028515-UTR-H-elongata_contig17702:6985..73441622930024.5028515-UTR-H-elongata_contig17702:6985..7344Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17702 6986..7344 +
1691679250.9668677-UTR-H-elongata_contig17702:6985..73441691679250.9668677-UTR-H-elongata_contig17702:6985..7344Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17702 6986..7344 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930024.3787549-CDS-H-elongata_contig17702:1251..12931622930024.3787549-CDS-H-elongata_contig17702:1251..1293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 1252..1293 +
1691679250.902102-CDS-H-elongata_contig17702:1251..12931691679250.902102-CDS-H-elongata_contig17702:1251..1293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 1252..1293 +
1622930024.3954618-CDS-H-elongata_contig17702:1740..18631622930024.3954618-CDS-H-elongata_contig17702:1740..1863Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 1741..1863 +
1691679250.9102218-CDS-H-elongata_contig17702:1740..18631691679250.9102218-CDS-H-elongata_contig17702:1740..1863Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 1741..1863 +
1622930024.4108365-CDS-H-elongata_contig17702:2090..21761622930024.4108365-CDS-H-elongata_contig17702:2090..2176Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 2091..2176 +
1691679250.920612-CDS-H-elongata_contig17702:2090..21761691679250.920612-CDS-H-elongata_contig17702:2090..2176Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 2091..2176 +
1622930024.4244459-CDS-H-elongata_contig17702:2998..30701622930024.4244459-CDS-H-elongata_contig17702:2998..3070Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 2999..3070 +
1691679250.9281719-CDS-H-elongata_contig17702:2998..30701691679250.9281719-CDS-H-elongata_contig17702:2998..3070Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 2999..3070 +
1622930024.4368312-CDS-H-elongata_contig17702:4050..43581622930024.4368312-CDS-H-elongata_contig17702:4050..4358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 4051..4358 +
1691679250.936072-CDS-H-elongata_contig17702:4050..43581691679250.936072-CDS-H-elongata_contig17702:4050..4358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 4051..4358 +
1622930024.4531314-CDS-H-elongata_contig17702:5061..53271622930024.4531314-CDS-H-elongata_contig17702:5061..5327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 5062..5327 +
1691679250.9437592-CDS-H-elongata_contig17702:5061..53271691679250.9437592-CDS-H-elongata_contig17702:5061..5327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 5062..5327 +
1622930024.4702916-CDS-H-elongata_contig17702:5997..61441622930024.4702916-CDS-H-elongata_contig17702:5997..6144Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 5998..6144 +
1691679250.9512568-CDS-H-elongata_contig17702:5997..61441691679250.9512568-CDS-H-elongata_contig17702:5997..6144Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 5998..6144 +
1622930024.4869187-CDS-H-elongata_contig17702:6508..69851622930024.4869187-CDS-H-elongata_contig17702:6508..6985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 6509..6985 +
1691679250.9588592-CDS-H-elongata_contig17702:6508..69851691679250.9588592-CDS-H-elongata_contig17702:6508..6985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17702 6509..6985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17702.4643.1prot_H-elongata_contig17702.4643.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17702 1252..6985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17702.4643.1

>prot_H-elongata_contig17702.4643.1 ID=prot_H-elongata_contig17702.4643.1|Name=mRNA_H-elongata_contig17702.4643.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=507bp
MLEQVLQAAESRAEVRDSEIATELLEQLKAMGPKITRIIEDNAEGDPAML
GALFKVNDAVDNTLQLHKDVVDGGKSVPLLPPSRHSSGVDAVADGMDKLS
VGQAVGSRAESKSRRSVPKLAGPRSGKKGQGKGIQVQGAAGPKPLDLLSG
FELEGSSNDALNTKNRAVEGAAEVFSAAASTTDNIFAEFGAPAMATATGS
QGGMMATSGQVVEQQLQQPLQQPLQQQPQQQPRPAQLGARTAADKAQSLL
DNLGALYAGGSSTRNVALDKFEPAGSASDRRFSSFSDAGSGIATSIAQQT
SPFDAISALGVQPQQQQQQAYQHSGHAAQGSVERSESSWGLQGPFHPQPS
QVLQQPPQPLQGYHEPQQQPLPQPPQVLQEPPQLLQGYQEPQQQPQAFQP
QPQDFQQQLSQGFQQQPQDFQHQPQDFTQQPQAFQQQLQDFHQQPQDFHQ
QPQAFQQQPHAFQQQPQGFHQPPQAFQQQTQTSQHQPEAFQQQPQAFQHP
RHQQQF*
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mRNA from alignment at H-elongata_contig17702:57..7344+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17702.4643.1 ID=mRNA_H-elongata_contig17702.4643.1|Name=mRNA_H-elongata_contig17702.4643.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7288bp|location=Sequence derived from alignment at H-elongata_contig17702:57..7344+ (Himanthalia elongata Himel1 dioecious)
GCCATCCCTCCCGCACAGCGAGAATTCCCGTTATTCGTGGAAACCTACCA
CGGCCTCAGAGCTGAGGGGCTGCCGTTTAAGCAGCAATACCAGCCGGACC
GACCTCCTGTGCTGGACCCCGGGGGGGGAAGCCTTCTCGATCGCCGCGCC
TACGCGGCGCCAGGAGTTGCATTCGAAGGAGGAGGGGGGCGTGGTAGGGT
GGGACAGGGGGGTGGGGAAAGTGGAGGCGAGACTCGTAGAGGTGGGGGAG
GAGGGAAAGGAGGGGGAGACAACGCATCGGTGCACGACGAGCTTGGAGCG
TTGTCGGGTGCGTACATGCTGGTATCACGTGTTATGATTGTCGTTTGATT
CGCCTGTTTCTCGCTTGGGTCGACCTTCAGTAATTTGCACCTCTATCGCT
AGCTTTCCCTTCTTCATTCAAGATCGGGACGGGGTAGAGGTAGGGGGTAT
TTGAGGCAGCGGAGGTGGTTCCTGCCTCACGAAATCATCGTTCGCTCGAG
TAACAAGTCTCTTGTTTAGGCGGCGGCCTGATTCCGTTATAAAGTTGAAC
CTCCAGATGGAAATTGCCTCTTGCTGATGTTGAAGTTGCTGTTGGCATTA
ATGCGGACGCCACTCTGGATTCGCTTGTTTGTTCGATCTTACTCGTTGTA
TCTTCGTGAATCATTTTTTGACATCCGATTACTTCCATCTTGCTTTCTCG
CTTGCGTTGATTGCTTATTCTTCTCCCTAACGTTTCGTATACCAAAACGT
CTCTTTTGGTACTATGCCATAGTCCCCACCCCCCCCTTTGTAAACTCACG
GGTCGGAATGTCACGACCGGTTCCCTCCCACACCTCTTGATGAATGAGAA
AGTATCTGGGGGGGGTTGTCGATTGTTTTTTTGTTTTTTTTTTCACCCAC
GCCCCCCGGTATGCCTTTGCGAAGGATTTCCCCGGGAAATCTTCGACAGC
AACCGACACACCGCATTCTTCCACTAGATGTCTTGTGCCACATGACGATC
TGTTACCCACTAAATTGTGCCGAAATCTTTGCCACTCCCTAAAATCTTTG
GAGCACACTGAATGTTTCCTGGTTCCTATTATTTTTGCCACGCTAGTTTG
ATTCCGCTCTGTCTATGCTACATTCGTTTGCCCGTGTTTGTCTATGGACA
GTATCCGACAGAGAGATAGTTGCCACGGGGGCGTCTTGCTCGGAAATGCT
CGAGCAGGTGCTGCAGGCGGCCGAGTCGCGTGCTGAGGTGGGCTTCCTTC
TCCTCCACCTCCCCACCCCCTCTAAATAAAAACGCCAAGCCCATACAATA
ATGACTCTGGTCGGCGACCGTCCACCGTTGGGTTTTCAGTCTTCCTTGGT
AGGCGTTTAGTTCCCCGCTGGGCGGTCGGGCGCAACGTAATCCGTCGTCG
TTAAAAGTGACCTCGGCTAGACTGACGGCCACAGCGCACAACAAAATTCC
ACCTTTCGAGCCAACGAAAAAAAAATCCACGTTACCATCCCTTCGGTGAG
AGGATGCCCGCCATGACAGCAAGGTTTGTAAAAACGTGTTGAACGGCGTT
TGCATCCTATTGGACTCGAGTTGAACCTAGATAATCTTGTATCTCACGCC
GAGCTGGTCAAATTGTTAGCCCGATCATCGTGGCCGCTATATCCCTTTGT
TTTCCCCCACTCCATATCCTGCTAATGGGCATAGGTGCGGGACTCGGAAA
TCGCGACCGAACTGTTGGAGCAGCTGAAGGCGATGGGGCCTAAAATCACG
AGGATCATCGAGGACAACGCGGAAGGCGATCCGGCCATGCTTGGAGCCCT
TTTTAAGGTGCTCGCTGACGCTGCTGCTATGCACATAGATACATCTTATT
TAAGGTGGTTAAAAGTGTCGTGTGGGTCCATTATTCGTCCCGTGATGAGC
TCATCTCCGAAAGTTCGCACCATAAACCGTGATCTACGCTTCGCATCCCA
CGAGGGTGTACGTGAGGGGATGAAATAAACTAGCCTTTTCCTCTTAATCC
GATCAATGTCCCACCACACGAAATATGGCGGCAGGTGAACGACGCCGTGG
ACAACACTCTGCAGCTGCACAAGGACGTTGTAGATGGAGGAAAGTCCGTT
CCCCTCTTGCCGCCGTCCAGGTACCGTTTCCTCACCGTACTGTATGGTAC
CAAGCCGTACCGTTCCGCACTGTACCACACCGTGTCGCACCATATCATTC
CATACCGTACCCTGAATGCCACGCTAGGCCGCACGATTCCGTACCTCCGC
CGCGCCACACAAAACCATGTCGAACCACAACGTTACGAAATCACCGTCTT
AAGTTTGTGCGTTGCCGTGCTGATAATTCCGTACCGTACCGCAGGACTAT
ACCACGCCCTACGGTACCGATCAAACCATGATGTGCCATCACGTGCAATA
CGCCTGTCTCCAGCCGTGCCTTACTGAGTCTTACAGGACTATTTCATACT
ATACCGTACAGTTAGTACCATACCACACCACGCCGTACCGTATCGAACCA
CATCGCATTGTGCCGGTATACAGTGCTTGAACCTATTGTTCCGTACGATA
CCGTAACGAATCGGGTGTTTCGGGCGCGGTATTGTCAGCAATCAACGAAC
AACCCGGTGCTCTGGGTGCTCTATGTTTTTGTTGTTTTGTTGGCTTTGGT
TACACGTTTATTTATTTGTTTCAAGTCAGGCGCGCCGCTACGAGTTTCAG
ACCTTTAACCACCGGTACACTAGAGACAATTCCTATAGGACCCTGGGAAA
CAGGCCATGCATCGAATTCCAATCTTAACCATGGATACCATTTTGTATGC
TACCATTCGAGCGTTTTGCCGTCGTCTGATGGGTTTTCGATTTTGATCGT
TGGAGGTCTGCCCCTTATCCCCTCTACCCCATCCTCTTCGTTCTATTTCT
ATGTATTACTCTTGGGGGTGGGGGGTCGCACCACGCGTCCAGGCACTCCT
CCGGCGTCGATGCGGTGGCGGACGGGATGGATAAGCTCTCGGTCGGGCAG
GCCGTGGGATCTCGGTAAGGCACGTTTAAGATATATTTGACATTTTACTG
CGATTACGGAGGCTGCGCCCGTTATTCAAGTTACTTTGAGGACTGCTGGC
TCAGTGTCGGTGGACTCTCGGTGGTCAACGCCATCGGTACGCAATTGTGT
GACCTGATGAAATCGGGATTGGCCCGATGGCGGTTTGACGGTAGAGATGG
ACGCCGTCGCGGTAAACGAGAGGATCGCTGGAGTACGCACCAGATTCAGC
CAGGGTTGGGAGAATGAGGAGGCTGACGCGGGACGGGACAGCCGAACCCG
TCTCGCGCGACCAAATTCTCAGGCGCGAACGGGGGCAGGGAAAACTCAAT
TTTCCCTATTTAGTTGGCCACAAGCAGGAGGCAACCAAGTACGGTTGATC
TTACTCTGCAATGTGTGAAGACCACACTATTGGTTTCATGCGTCATCTAC
GGTTCTACCCTTGCCCTAAAAATACGTCCACTGCTTATTTCTAGCCCAGT
CATCCTGTCTGCTTGATGTTAAGAAACCTCCGACCCCCGATCCAGACCCC
TTCATCCTTGCGGAATTTCCAATTTGCAGCGGGGAGACAGAGGCATGTCT
TCTGCGGGGATACCGTAAGCTTCGCCCTGTGATGTTTCCAAGGCGTTTTC
ATCTTCCTTCGCATTATTATAGTTTAAAACTGTGGATATATTGGTTAATC
GAGAGTAAGAACGTGCGTTGTCCCTATTTCCCCCCCCCCCTAACACATGT
TGTCCACGTATTTCGTGGTCGTTCTGTACCAGACAACAGTAGGAGTGTGA
AGGGGTTTACAACATACGCCGTGCTTGCCCCGAACCGTACCAGCACCACG
CCTCCCACGTATTACGTGGTCATTTTATACGAGAGAACAGCAAAAATATG
GGCGCGTACAGTTGACGCTGTCCTTGACCGCAAAATTTCCTCCTATACCT
CTCCCCTCTCCCCACGTCCGTTCGCCTACTTACGTTTCGTCTAGTGCTGA
ATCAAAATCGCGGCGAAGTGTTCCGAAGCTCGCTGGGCCCCGGTCTGGTA
AGAAAGGACAAGGGAAGGGGATTCAAGTCCAAGGAGCCGCCGGCCCCAAA
CCCCTGGACCTGTTGAGCGGCTTCGAGCTCGAGGGCTCGAGCAATGACGC
CCTAAACACCAAAAACCGGGCTGTGGAGGGCGCCGCGGAAGTTTTCTCTG
CCGCCGCCTCGACTACGGATAATATTTTCGCGGAATTTGGGGCGCCTGCG
ATGGCAACAGCGACAGGATCGCAGGGGGGAATGATGGCGACGAGTGGACA
AGGTGAGATGGGAGTTGAAGGCGAGAGATGAAAAATATTTACGGTACCCA
CGCAACACTCGCGAGGCAAGGGGTTAGGGGAGTTGTGTATAAATATTGCT
TTGGACTATGTTAAGATCGTGTAGGTGTGTGCAACGATTGTGTAAGAGCT
CACGGTGGCCGTTGGGTTTGTTCTGTCGGATTGATAATTGTTGTGTTCGG
TGTACGACAGTTATGTTAGGCTTACATGATATACCGCCTGTGATGATTTG
TTGAAGCGTGCGATGGCTCTTACGATGGTTTGAACCGTGGTGGGGACTGA
CATTTGGGCGTTCTTTTGACCATGAGACCCGTGCGTGGATGTCAAGGGGA
AATAATTGTGGCCTCCGAATGTCCCGCGGCCAAACCTTACCACTTTCATG
TTCTCCCGGGTATTCTTGATTGCCGATCCTGCGCCGCACGCCCATCCCCT
GCTTGTCTGACTGTGTTTTGGGTGTACTACGAGTGTGTGCATGAAAGACG
AAGGGAATCATGGCAACACTCGTGCACATTTTGTTTCATCTTGACCTTCG
CACCGAGCTCCCGTACCTGTAACAGATCCGTGCGATATTAGAATGAAGGG
GTTAAGTATCCAATTAATGTGCCAAGAAAATACAAAGAGAACGTTATTTT
AGTGCGCGAACGTAATCTCTGGTAACGTTTACGCTCTCTTATGCTCCCCG
AGCAGTCGTCGAACAACAGCTGCAGCAGCCACTTCAGCAGCCGCTTCAGC
AGCAGCCGCAGCAGCAACCTCGGCCAGCTCAGTTGGGGGCCCGGACCGCC
GCGGACAAGGCGCAGAGTCTGCTCGACAACTTAGGAGCGCTTTACGCCGG
AGGGAGCAGCACAAGAAATGTTGCGTTAGACAAATTCGAACCTGCAGGAA
GCGCGAGCGATCGTAGATTTTCGTCTTTTTCTGACGCGGGGTCGGGGATA
GCGACGAGTATCGCTCAGCAGGTAGGGGTCGATGACACGGAGAAGGGTTT
CATAAATCAAGAGAGGCAAATCAAAGGCGGTAGATGGGCACCAGTAGTGA
GTGGTGCTCAGCAACGATGGGAGTTTCGATGTGCGTTTCTTGGGTTGATT
TCGCCGAGCTGGTGTATGTTGATGGTCATGAAAAAGCGTTTTATGTCGCA
TGGTGGCAGCGGGTTGCGCTGTGCGCCTCGTGACTGACTTCAGCTAATAT
ATACCCCCTCCAAAACGAATGCACTAACTTGTTTGCGGTAGCACTGATAT
ATCTAGTGCCGAAGTCGTGAGGCATGCTCAACACAGTTTACCGGCAACAT
TGGAATTCGGAGGGCAATTCTGCGTTTCATCCGTGCGCGGGACGTGTTGA
TCATCATGAGGAGTAACTTGGAGCTTTGTCAACATGGAAGGGGGTAGAGG
ATAGCGGGCGCACCTGTCTTTGCTAGTGGGAAGCTTTGTCCTCACCCAGC
TCAACGAAGTCTTGCTTGGACCGGGCTCGAGCAGGGCGCTCGGCGTATGT
GTATTTTTGTCCTTGATCCATTCGTGCCGCGTCCTCATGTCTTTTTACGT
GTTTAGTGCAGTTTGGGAATTTGGTTGTGTATTCGCGCGCGTCACCGACT
CTCTTACCGATTACCCGCCCCTTTCGTGCTCGACTACGCAGACATCGCCG
TTTGATGCCATCAGTGCGTTGGGCGTTCAACCGCAGCAACAGCAGCAGCA
GGCGTATCAGCATTCCGGGCATGCGGCGCAAGGATCAGTGGAACGCAGCG
AAAGCTCGTGGGGGTTACAAGGGCCGTTCCATCCTCAGGTGGATTCGTTG
TGGATGCAATGTCGTCTAAATAATCCACCACAAGTATAACACGGTAATGG
GAATGTCATAATATCCTGCGAGGTCAGCTACAACCGAGGGCTGGTGGATC
GGGCCCCGGGGCGTTACTACCTGCTACCTTTTGTGGGCCTCCCGCTGCGT
AAATATTTCCTGCTCATAATTCGACGCCGAAAGGGAGCAGCTTGTCAAGC
CACTTAAGAGACGTCGCGGTCGATTTTATCTCGCCATGTATGGTTTGATC
GAATTGACCGACGGATTATAGCGCCTTTTTTTTCACACCTCTGAAGTCTC
CGTATTCTTGCTTCCCTCTCCGTTTTTTGTGGGGTTGTGGGCGCTGCCTC
AGCCTTCCCAAGTCTTGCAGCAACCGCCGCAGCCGCTCCAGGGCTATCAT
GAGCCGCAGCAGCAGCCTCTGCCTCAACCTCCCCAAGTACTACAGGAACC
GCCGCAGCTTCTCCAGGGCTATCAAGAGCCGCAGCAGCAGCCACAAGCCT
TTCAACCACAGCCACAAGATTTCCAACAGCAGCTGTCACAAGGTTTTCAG
CAGCAGCCGCAAGATTTCCAACATCAACCACAAGATTTTACACAGCAGCC
ACAAGCCTTTCAGCAGCAGCTGCAAGATTTCCATCAGCAGCCGCAAGATT
TCCATCAGCAGCCGCAAGCCTTCCAGCAACAGCCACACGCATTTCAGCAG
CAGCCACAAGGTTTTCACCAGCCACCACAAGCTTTCCAGCAGCAGACGCA
AACTTCCCAGCACCAACCGGAAGCCTTCCAACAGCAACCGCAAGCCTTCC
AACATCCGCGACACCAACAGCAATTTTAGCGTTGCAATCGAGTTGCGGTG
CCAGCTCGTGGTCGTTACATTTCCCCTAAATGTACCTTGGAAGCACCGAT
GGATGTTGAGAGGAGGACTTAGGTAATTCGTGTATCACAACGTCAGTGCT
CTAATGCTCGCCTCTTGTTGACATTCCTTGATGCTTCGAGCTCTAGATCG
TCAACCTTCGTTTTAGGGATATAAATCGGCAGTTTATTATTGCTTAGCCC
GTTGGCGATCGGTTGCTATTGAAGAAAAGGAGGGACACCGCTATATTTCA
ACGGTCTTTCGTGATGGAAACGTGGTGCAACTCGCCTTATTTTTTATATT
TAAATAAAACTATATTATTTTTATTTAAAAGACTTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig17702:57..7344+

>mRNA_H-elongata_contig17702.4643.1 ID=mRNA_H-elongata_contig17702.4643.1|Name=mRNA_H-elongata_contig17702.4643.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3042bp|location=Sequence derived from alignment at H-elongata_contig17702:57..7344+ (Himanthalia elongata Himel1 dioecious)
ATGCTCGAGCAGGTGCTGCAGGCGGCCGAGTCGCGTGCTGAGATGCTCGA
GCAGGTGCTGCAGGCGGCCGAGTCGCGTGCTGAGGTGCGGGACTCGGAAA
TCGCGACCGAACTGTTGGAGCAGCTGAAGGCGATGGGGCCTAAAATCACG
AGGATCATCGAGGACAACGCGGAAGGCGATCCGGCCATGCTTGGAGCCCT
TTTTAAGGTGCGGGACTCGGAAATCGCGACCGAACTGTTGGAGCAGCTGA
AGGCGATGGGGCCTAAAATCACGAGGATCATCGAGGACAACGCGGAAGGC
GATCCGGCCATGCTTGGAGCCCTTTTTAAGGTGAACGACGCCGTGGACAA
CACTCTGCAGCTGCACAAGGACGTTGTAGATGGAGGAAAGTCCGTTCCCC
TCTTGCCGCCGTCCAGGTGAACGACGCCGTGGACAACACTCTGCAGCTGC
ACAAGGACGTTGTAGATGGAGGAAAGTCCGTTCCCCTCTTGCCGCCGTCC
AGGCACTCCTCCGGCGTCGATGCGGTGGCGGACGGGATGGATAAGCTCTC
GGTCGGGCAGGCCGTGGGATCTCGGCACTCCTCCGGCGTCGATGCGGTGG
CGGACGGGATGGATAAGCTCTCGGTCGGGCAGGCCGTGGGATCTCGTGCT
GAATCAAAATCGCGGCGAAGTGTTCCGAAGCTCGCTGGGCCCCGGTCTGG
TAAGAAAGGACAAGGGAAGGGGATTCAAGTCCAAGGAGCCGCCGGCCCCA
AACCCCTGGACCTGTTGAGCGGCTTCGAGCTCGAGGGCTCGAGCAATGAC
GCCCTAAACACCAAAAACCGGGCTGTGGAGGGCGCCGCGGAAGTTTTCTC
TGCCGCCGCCTCGACTACGGATAATATTTTCGCGGAATTTGGGGCGCCTG
CGATGGCAACAGCGACAGGATCGCAGGGGGGAATGATGGCGACGAGTGGA
CAAGTGCTGAATCAAAATCGCGGCGAAGTGTTCCGAAGCTCGCTGGGCCC
CGGTCTGGTAAGAAAGGACAAGGGAAGGGGATTCAAGTCCAAGGAGCCGC
CGGCCCCAAACCCCTGGACCTGTTGAGCGGCTTCGAGCTCGAGGGCTCGA
GCAATGACGCCCTAAACACCAAAAACCGGGCTGTGGAGGGCGCCGCGGAA
GTTTTCTCTGCCGCCGCCTCGACTACGGATAATATTTTCGCGGAATTTGG
GGCGCCTGCGATGGCAACAGCGACAGGATCGCAGGGGGGAATGATGGCGA
CGAGTGGACAAGTCGTCGAACAACAGCTGCAGCAGCCACTTCAGCAGCCG
CTTCAGCAGCAGCCGCAGCAGCAACCTCGGCCAGCTCAGTTGGGGGCCCG
GACCGCCGCGGACAAGGCGCAGAGTCTGCTCGACAACTTAGGAGCGCTTT
ACGCCGGAGGGAGCAGCACAAGAAATGTTGCGTTAGACAAATTCGAACCT
GCAGGAAGCGCGAGCGATCGTAGATTTTCGTCTTTTTCTGACGCGGGGTC
GGGGATAGCGACGAGTATCGCTCAGCAGTCGTCGAACAACAGCTGCAGCA
GCCACTTCAGCAGCCGCTTCAGCAGCAGCCGCAGCAGCAACCTCGGCCAG
CTCAGTTGGGGGCCCGGACCGCCGCGGACAAGGCGCAGAGTCTGCTCGAC
AACTTAGGAGCGCTTTACGCCGGAGGGAGCAGCACAAGAAATGTTGCGTT
AGACAAATTCGAACCTGCAGGAAGCGCGAGCGATCGTAGATTTTCGTCTT
TTTCTGACGCGGGGTCGGGGATAGCGACGAGTATCGCTCAGCAGACATCG
CCGTTTGATGCCATCAGTGCGTTGGGCGTTCAACCGCAGCAACAGCAGCA
GCAGGCGTATCAGCATTCCGGGCATGCGGCGCAAGGATCAGTGGAACGCA
GCGAAAGCTCGTGGGGGTTACAAGGGCCGTTCCATCCTCAGACATCGCCG
TTTGATGCCATCAGTGCGTTGGGCGTTCAACCGCAGCAACAGCAGCAGCA
GGCGTATCAGCATTCCGGGCATGCGGCGCAAGGATCAGTGGAACGCAGCG
AAAGCTCGTGGGGGTTACAAGGGCCGTTCCATCCTCAGCCTTCCCAAGTC
TTGCAGCAACCGCCGCAGCCGCTCCAGGGCTATCATGAGCCGCAGCAGCA
GCCTCTGCCTCAACCTCCCCAAGTACTACAGGAACCGCCGCAGCTTCTCC
AGGGCTATCAAGAGCCGCAGCAGCAGCCACAAGCCTTTCAACCACAGCCA
CAAGATTTCCAACAGCAGCTGTCACAAGGTTTTCAGCAGCAGCCGCAAGA
TTTCCAACATCAACCACAAGATTTTACACAGCAGCCACAAGCCTTTCAGC
AGCAGCTGCAAGATTTCCATCAGCAGCCGCAAGATTTCCATCAGCAGCCG
CAAGCCTTCCAGCAACAGCCACACGCATTTCAGCAGCAGCCACAAGGTTT
TCACCAGCCACCACAAGCTTTCCAGCAGCAGACGCAAACTTCCCAGCACC
AACCGGAAGCCTTCCAACAGCAACCGCAAGCCTTCCAACATCCGCGACAC
CAACAGCAATTTTAGCCTTCCCAAGTCTTGCAGCAACCGCCGCAGCCGCT
CCAGGGCTATCATGAGCCGCAGCAGCAGCCTCTGCCTCAACCTCCCCAAG
TACTACAGGAACCGCCGCAGCTTCTCCAGGGCTATCAAGAGCCGCAGCAG
CAGCCACAAGCCTTTCAACCACAGCCACAAGATTTCCAACAGCAGCTGTC
ACAAGGTTTTCAGCAGCAGCCGCAAGATTTCCAACATCAACCACAAGATT
TTACACAGCAGCCACAAGCCTTTCAGCAGCAGCTGCAAGATTTCCATCAG
CAGCCGCAAGATTTCCATCAGCAGCCGCAAGCCTTCCAGCAACAGCCACA
CGCATTTCAGCAGCAGCCACAAGGTTTTCACCAGCCACCACAAGCTTTCC
AGCAGCAGACGCAAACTTCCCAGCACCAACCGGAAGCCTTCCAACAGCAA
CCGCAAGCCTTCCAACATCCGCGACACCAACAGCAATTTTAG
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