prot_H-elongata_contig176535.4621.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176535.4621.1
Unique Nameprot_H-elongata_contig176535.4621.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: D7FI31_ECTSI (Glycerol-3-phosphate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI31_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 1.690e-32
Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA V+D +TGE+WE+ AKAVINATGCFCD+IRKMDN EA+ L+ PAAGVHI+LPAHFSP+ MGLIVPKTSDGR
Sbjct:  117 GATVQDTITGEKWEVAAKAVINATGCFCDAIRKMDNPEAKNLVMPAAGVHIMLPAHFSPARMGLIVPKTSDGR 189          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7M3S7F9_PYTIN (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A7M3S7F9_PYTIN)

HSP 1 Score: 107 bits (268), Expect = 3.980e-27
Identity = 49/73 (67.12%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA V+D +TGEEW+I+A+AV+NATG F D IR+MD+ E  ++  PAAGVH+VLP HFSPS MGLIVPKT+DGR
Sbjct:   21 GAHVKDTLTGEEWDIKAQAVVNATGPFTDGIRQMDDPETPKICVPAAGVHVVLPDHFSPSRMGLIVPKTTDGR 93          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7I6MWH2_9STRA (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Phytopythium sindhum TaxID=795340 RepID=A0A7I6MWH2_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.120e-27
Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA VRD +TG+EW+I+AKAV+NATG F DS+R+MD+ E  ++  PAAGVH VLP HFSP+ MGLIVPKTSDGR
Sbjct:   97 GARVRDSLTGDEWDIKAKAVVNATGPFTDSLRQMDDPEVAKICVPAAGVHAVLPDHFSPNRMGLIVPKTSDGR 169          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7M3S7F7_9STRA (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Lagenidium giganteum TaxID=4803 RepID=A0A7M3S7F7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.980e-27
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA VRD +TGEEW+I+A AV+NATG F D IR+MD+ + E++  PAAGVH VLP HFSPS MGLIVPKTSDGR
Sbjct:   82 GAHVRDTLTGEEWDIKAHAVVNATGPFTDGIRQMDDPKKEKICVPAAGVHAVLPDHFSPSRMGLIVPKTSDGR 154          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7I6N0B8_9STRA (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Halophytophthora batemanensis TaxID=127446 RepID=A0A7I6N0B8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 9.370e-27
Identity = 48/73 (65.75%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA V+D +TGEEW+++AK V+NATG F DS+R+MDN + E++  PAAGVH VLP HFSP+ MGLIVPKT+DGR
Sbjct:   33 GAHVQDTLTGEEWDVKAKGVVNATGPFTDSMRQMDNPDTEKICVPAAGVHTVLPDHFSPNRMGLIVPKTTDGR 105          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A1W0A6Y2_9STRA (Glycerol-3-phosphate dehydrogenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6Y2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.400e-26
Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            G AV+D+M+G+EW I  K VINATG F DSIRKMDN E + +  PAAGVH+VLP HFSP+ MGLIVPKTSDGR
Sbjct:  274 GVAVKDVMSGKEWSIPCKTVINATGPFTDSIRKMDNPEVQNICVPAAGVHVVLPDHFSPNRMGLIVPKTSDGR 346          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7M3S7F6_9STRA (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Pythium caudatum TaxID=1278159 RepID=A0A7M3S7F6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.550e-26
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA V+D +TGEEW+I+A+AV+NATG F D IR MD+   +++  PAAGVH+VLP HFSPS MGLIVPKT+DGR
Sbjct:   49 GAHVKDSITGEEWDIKAQAVVNATGPFTDGIRLMDDPTKQKICVPAAGVHVVLPDHFSPSRMGLIVPKTTDGR 121          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7I6MY10_PYTOL (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A7I6MY10_PYTOL)

HSP 1 Score: 105 bits (262), Expect = 3.670e-26
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA V+D +TGEEW+I+A AV+NATG F D IR MD+ + +++  PAAGVH+VLP HFSPS MGLIVPKT+DGR
Sbjct:   33 GAHVKDQLTGEEWDIKATAVVNATGPFTDGIRLMDDPKKQKICVPAAGVHVVLPDHFSPSRMGLIVPKTTDGR 105          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A7I6N0C7_9STRA (Mitochondrial glycerol-3-phosphate dehydrogenase (Fragment) n=1 Tax=Pythium monospermum TaxID=92964 RepID=A0A7I6N0C7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.410e-26
Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            GA V+D +TGEEW+I+AKAV+NATG F D IR MD+ +  ++  PAAGVH+VLP HFSPS MGLIVPKT+DGR
Sbjct:   89 GAHVKDTLTGEEWDIKAKAVVNATGPFTDGIRLMDDPKKPKICVPAAGVHVVLPDHFSPSRMGLIVPKTTDGR 161          
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Match: A0A485LBW4_9STRA (Glycerol-3-phosphate dehydrogenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBW4_9STRA)

HSP 1 Score: 108 bits (270), Expect = 6.770e-26
Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    2 GAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGVHIVLPAHFSPSTMGLIVPKTSDGR 74
            G  V+D  TGE W+I+AKAV+NATG F D +RKMDN +AE +  PAAGVH+VLP H+SPS MGLIVPKT+DGR
Sbjct:  279 GVHVQDTQTGETWDIKAKAVVNATGPFTDGVRKMDNPDAENICVPAAGVHVVLPDHYSPSRMGLIVPKTTDGR 351          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176535.4621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI31_ECTSI1.690e-3278.08Glycerol-3-phosphate dehydrogenase n=1 Tax=Ectocar... [more]
A0A7M3S7F9_PYTIN3.980e-2767.12Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A7I6MWH2_9STRA5.120e-2768.49Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A7M3S7F7_9STRA5.980e-2769.86Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A7I6N0B8_9STRA9.370e-2765.75Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A1W0A6Y2_9STRA1.400e-2669.86Glycerol-3-phosphate dehydrogenase n=1 Tax=Thraust... [more]
A0A7M3S7F6_9STRA3.550e-2665.75Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A7I6MY10_PYTOL3.670e-2665.75Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A7I6N0C7_9STRA4.410e-2667.12Mitochondrial glycerol-3-phosphate dehydrogenase (... [more]
A0A485LBW4_9STRA6.770e-2667.12Glycerol-3-phosphate dehydrogenase n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 2..43
e-value: 2.5E-16
score: 61.8
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 2..42
NoneNo IPR availableGENE3D3.30.9.10coord: 44..74
e-value: 2.5E-16
score: 61.8
IPR000447FAD-dependent glycerol-3-phosphate dehydrogenasePANTHERPTHR11985GLYCEROL-3-PHOSPHATE DEHYDROGENASEcoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176535contigH-elongata_contig176535:344..954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176535.4621.1mRNA_H-elongata_contig176535.4621.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176535 314..954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176535.4621.1 ID=prot_H-elongata_contig176535.4621.1|Name=mRNA_H-elongata_contig176535.4621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MGAAVRDMMTGEEWEIEAKAVINATGCFCDSIRKMDNAEAEELITPAAGV
HIVLPAHFSPSTMGLIVPKTSDGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR000447G3P_DH_FAD-dep