prot_H-elongata_contig175696.4584.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: D7G280_ECTSI (TAFII55_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G280_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 3.240e-17 Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVYK 42
MD K YPARLVD+PCVLETQKTLDK TFFKSGDVGQMLIVYK
Sbjct: 49 MDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYK 90
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A4D9CRB1_9STRA (TAFII55_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRB1_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.970e-10 Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 0
Query: 4 KVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVYK 42
+V+PARLV+LPCV+E KT+D T FKS DVGQM++VYK
Sbjct: 85 RVFPARLVNLPCVVEVHKTVDYVTLFKSADVGQMVVVYK 123
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A835YLK6_9STRA (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 7.260e-10 Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVYK 42
+D + YPARLV+LPC LET KT D T ++KS D+GQMLIVY+
Sbjct: 52 IDGERYPARLVNLPCNLETLKTTDNTMYYKSADIGQMLIVYE 93
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A5J4WMP9_9EUKA (Putative ATP-dependent RNA helicase eIF4A n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WMP9_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 8.150e-10 Identity = 23/42 (54.76%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVYK 42
MD +++PA LV+LPC++E+QKT DK TF+K+ D+ QMLI+++
Sbjct: 305 MDGEIFPATLVNLPCIIESQKTYDKKTFYKTADISQMLIIHE 346
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A2V3IJD7_9FLOR (Transcription initiation factor TFIID subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJD7_9FLOR) HSP 1 Score: 59.7 bits (143), Expect = 2.750e-9 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIV 40
+D K YPA L+DLPC++ET KT DK TF+KSGD+ Q+L+V
Sbjct: 54 IDGKHYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVV 93
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A152A3L8_9MYCE (Transcription initiation factor TFIID subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A3L8_9MYCE) HSP 1 Score: 58.9 bits (141), Expect = 5.320e-9 Identity = 21/41 (51.22%), Postives = 35/41 (85.37%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVY 41
+ D+++ + LVDLPC++E+QKT+DK FFK+ D+GQM++V+
Sbjct: 69 LGDEIFESTLVDLPCIVESQKTIDKVNFFKTSDIGQMILVH 109
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A7S4HTG7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HTG7_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 5.320e-9 Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIV 40
+D + P RL DLPCV+ET KT+D+ FFK+GDVGQM+IV
Sbjct: 68 VDGEKLPMRLADLPCVIETHKTVDRVGFFKTGDVGQMIIV 107
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: D3B1R5_POLPP (Transcription initiation factor TFIID subunit n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B1R5_POLPP) HSP 1 Score: 57.8 bits (138), Expect = 1.360e-8 Identity = 23/40 (57.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 3 DKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVYK 42
D+ + A L DLPC+LE+ KTLDKTT++K+ D+GQM+ VY+
Sbjct: 109 DQEFDASLFDLPCILESHKTLDKTTYYKTADIGQMIEVYE 148
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A1D1UUJ5_RAMVA (TAFII55_N domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UUJ5_RAMVA) HSP 1 Score: 56.2 bits (134), Expect = 3.850e-8 Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIV 40
+D + A+LVDLPCV+E+ KT+DK TF+K+GDV QML+V
Sbjct: 74 VDSMEFSAKLVDLPCVVESLKTIDKKTFYKTGDVCQMLVV 113
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Match: A0A7S2RHU4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHU4_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.270e-8 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query: 1 MDDKVYPARLVDLPCVLETQKTLDKTTFFKSGDVGQMLIVYK 42
+ D +YP LV+LPC +E+ KT D+ T FKS D+GQMLIV++
Sbjct: 66 LGDMIYPGLLVNLPCPVESHKTFDRITTFKSADIGQMLIVFE 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175696.4584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig175696.4584.1 ID=prot_H-elongata_contig175696.4584.1|Name=mRNA_H-elongata_contig175696.4584.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bpback to top |