prot_H-elongata_contig175107.4560.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175107.4560.1
Unique Nameprot_H-elongata_contig175107.4560.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: D8LB49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB49_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.430e-23
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARDIRRGCLGEGCKTGGEVLTVFWAILNGAM 51
            MMFIIFCSYGLGMWYGA+EVARD+R GC G  CKTGG+VLTVFWAILNGAM
Sbjct:  313 MMFIIFCSYGLGMWYGASEVARDLRDGCTGSHCKTGGDVLTVFWAILNGAM 363          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: K3W853_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W853_GLOUD)

HSP 1 Score: 62.4 bits (150), Expect = 6.230e-10
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARDIRRG--CLGEGCKTGGEVLTVFWAILNGAM 51
            M F +FC+Y  G++YGA +VA D   G  C+G GC  GG VLTVF+A++ GAM
Sbjct:  307 MFFTVFCTYACGLFYGAVKVANDRLDGNNCVGSGCYDGGRVLTVFFAVIMGAM 359          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: T0SBB4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SBB4_SAPDV)

HSP 1 Score: 59.7 bits (143), Expect = 5.560e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARD-IRRGCLGEGCKTGGEVLTVFWAILNGAM 51
            M F++FC+Y +GM+YGA ++  D I   C+G GC  GG V+TVF++I+  +M
Sbjct:  294 MFFVVFCTYAVGMYYGAVKITNDQINDKCVGSGCYDGGRVITVFFSIVMSSM 345          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: K3W848_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W848_GLOUD)

HSP 1 Score: 59.7 bits (143), Expect = 5.570e-9
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARDIRRG--CLGEGCKTGGEVLTVFWAILNGAM 51
            M F +FC+Y  GM+YGA +VA     G  C G GC  GG VLTVF+A++ GAM
Sbjct:  316 MFFTVFCTYACGMFYGALKVANSHLDGNTCSGSGCYDGGRVLTVFFAVIMGAM 368          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: T0PWV3_SAPDV (ABC transmembrane type-1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PWV3_SAPDV)

HSP 1 Score: 58.2 bits (139), Expect = 1.920e-8
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARD-IRRGCLGEGCKTGGEVLTVFWAILNGAM 51
            M F+IFC+Y +GM+YGA +VA D I   C+G GC   G VL +F+ I+  +M
Sbjct:  254 MFFVIFCTYAIGMYYGAVKVADDQITGSCVGSGCYDSGRVLVIFFCIIMSSM 305          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: K3W878_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W878_GLOUD)

HSP 1 Score: 58.2 bits (139), Expect = 1.940e-8
Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARDIRRG--CLGEGCKTGGEVLTVFWAILNGAM 51
            M F I+C+Y  G+++GA +++ D   G  C G GC  GG+V+T+F+AI+ GAM
Sbjct:  206 MFFTIYCTYAAGLYFGAIQISNDQLSGSQCAGHGCYDGGKVITIFFAIIMGAM 258          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: A0A067C3J5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C3J5_SAPPC)

HSP 1 Score: 57.8 bits (138), Expect = 2.660e-8
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARD-IRRGCLGEGCKTGGEVLTVFWAILNGAM 51
            M F+IFC+Y +GM+YGA +VA D I   C+G GC   G VL +F+ I+  +M
Sbjct:  285 MFFVIFCTYAIGMYYGAVKVADDQITGSCVGSGCYDSGRVLIIFFCIIMSSM 336          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: A0A1V9YWC7_9STRA (ATP-binding Cassette (ABC) Superfamily (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWC7_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.940e-8
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARD-IRRGCLGEGCKTGGEVLTVFWAILNGAM 51
            M F++FC+Y LGM+YGA +V+ D I   C G  C  GG VL VF++++  AM
Sbjct:  290 MFFVVFCTYSLGMYYGAVKVSNDQINDKCTGSHCYDGGRVLIVFFSVVMSAM 341          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: A0A1V9ZYI1_9STRA (ATP-binding Cassette (ABC) Superfamily (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYI1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.710e-8
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARDIRRG-CLGEGCKTGGEVLTVFWAILNGAMV 52
            M  I+FC+Y +GM+YGA +V  D   G C G GC  GG V+ VF++I+  A+V
Sbjct:  288 MFLIVFCTYAVGMYYGAVKVTNDQINGHCTGHGCYDGGRVIIVFFSIVMSALV 340          
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Match: K3W851_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W851_GLOUD)

HSP 1 Score: 56.2 bits (134), Expect = 9.190e-8
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 MMFIIFCSYGLGMWYGATEVARDIRRG--CLGEGCKTGGEVLTVFWAILNGAM 51
            + F +FC+Y +GM++GA ++A D   G  C G GC  GG+VL VF++++  AM
Sbjct:  165 LFFTMFCTYAIGMYFGAWKIANDQLEGNHCTGSGCYDGGKVLVVFFSVITAAM 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175107.4560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB49_ECTSI2.430e-2386.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3W853_GLOUD6.230e-1052.83Uncharacterized protein n=2 Tax=Globisporangium ul... [more]
T0SBB4_SAPDV5.560e-946.15Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
K3W848_GLOUD5.570e-952.83Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
T0PWV3_SAPDV1.920e-848.08ABC transmembrane type-1 domain-containing protein... [more]
K3W878_GLOUD1.940e-845.28Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067C3J5_SAPPC2.660e-848.08Uncharacterized protein n=2 Tax=Saprolegnia parasi... [more]
A0A1V9YWC7_9STRA4.940e-848.08ATP-binding Cassette (ABC) Superfamily (Fragment) ... [more]
A0A1V9ZYI1_9STRA6.710e-847.17ATP-binding Cassette (ABC) Superfamily (Fragment) ... [more]
K3W851_GLOUD9.190e-843.40Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..55
e-value: 7.8E-9
score: 36.2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175107contigH-elongata_contig175107:129..299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175107.4560.1mRNA_H-elongata_contig175107.4560.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175107 129..329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175107.4560.1 ID=prot_H-elongata_contig175107.4560.1|Name=mRNA_H-elongata_contig175107.4560.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MMFIIFCSYGLGMWYGATEVARDIRRGCLGEGCKTGGEVLTVFWAILNGA
MVCTLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf