prot_H-elongata_contig172438.4459.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 145 bits (367), Expect = 8.040e-38 Identity = 89/249 (35.74%), Postives = 141/249 (56.63%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
+L+A ++ LR+FD +Q F+++D++E+++ + E + G + +LNK++YGL Q AD CVFR + +G V +VVHVDDI + +++ D+F +L +K++GD+R+Y GC R+ A LKI Q Y E + +F E ++IP G+ LS+ D + EE+ +P+RE +G+LMW AT TRPDIA+AVRAVAR+C H +A + I+ Y
Sbjct: 23 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEE-RCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD-----QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPK-EIHWRAGLGILGY 263
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.310e-37 Identity = 89/249 (35.74%), Postives = 138/249 (55.42%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + DG +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC RN++ +L I Q + + + ++ R +P +SGV LS D E +FP+RE VG+LMW AT TRPDIA+AVRAVAR+C H AAM+I+ Y
Sbjct: 47 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPK-LVHWNAAMDILGY 287
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 145 bits (367), Expect = 6.920e-37 Identity = 89/249 (35.74%), Postives = 141/249 (56.63%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
+L+A ++ LR+FD +Q F+++D++E+++ + E + G + +LNK++YGL Q AD CVFR + +G V +VVHVDDI + +++ D+F +L +K++GD+R+Y GC R+ A LKI Q Y E + +F E ++IP G+ LS+ D + EE+ +P+RE +G+LMW AT TRPDIA+AVRAVAR+C H +A + I+ Y
Sbjct: 197 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEE-RCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD-----QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPK-EIHWRAGLGILGY 437
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.960e-36 Identity = 89/249 (35.74%), Postives = 141/249 (56.63%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
+L+A ++ LR+FD +Q F+++D++E+++ + E + G + +LNK++YGL Q AD CVFR + +G V +VVHVDDI + +++ D+F +L +K++GD+R+Y GC R+ A LKI Q Y E + +F E ++IP G+ LS+ D + EE+ +P+RE +G+LMW AT TRPDIA+AVRAVAR+C H +A + I+ Y
Sbjct: 718 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEE-RCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD-----QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPK-EIHWRAGLGILGY 958
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 145 bits (365), Expect = 3.860e-36 Identity = 89/249 (35.74%), Postives = 138/249 (55.42%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + DG +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC RN++ +L I Q + + + ++ R +P +SGV LS D E +FP+RE VG+LMW AT TRPDIA+AVRAVAR+C H AAM+I+ Y
Sbjct: 1383 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPK-LVHWNAAMDILGY 1623
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 145 bits (365), Expect = 3.860e-36 Identity = 89/249 (35.74%), Postives = 138/249 (55.42%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + DG +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC RN++ +L I Q + + + ++ R +P +SGV LS D E +FP+RE VG+LMW AT TRPDIA+AVRAVAR+C H AAM+I+ Y
Sbjct: 1169 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPK-LVHWNAAMDILGY 1409
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE) HSP 1 Score: 145 bits (365), Expect = 3.990e-36 Identity = 89/249 (35.74%), Postives = 138/249 (55.42%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + DG +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC RN++ +L I Q + + + ++ R +P +SGV LS D E +FP+RE VG+LMW AT TRPDIA+AVRAVAR+C H AAM+I+ Y
Sbjct: 1237 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPK-LVHWNAAMDILGY 1477
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 144 bits (362), Expect = 9.360e-36 Identity = 89/249 (35.74%), Postives = 137/249 (55.02%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + DG +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC RN++ +L I Q + + + ++ R +P +SGV LS D E FP+RE VG+LMW AT TRPDIA+AVRAVAR+C H AAM+I+ Y
Sbjct: 877 MLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD-----ADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPK-LVHWNAAMDILGY 1117
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5J9U0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U0_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.410e-34 Identity = 87/249 (34.94%), Postives = 136/249 (54.62%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + DG +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC RN++ +L I Q + + + ++ + +P +SGV LS D E FP+RE VG+LMW AT TRP IA+AVRAVAR+C H AAM+I+ Y
Sbjct: 517 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGKSVPMSSGV-KLSDFD-----ADEVATDFPFRELVGSLMWLATQTRPGIANAVRAVARYCASPK-LVHWNAAMDILGY 757
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Match: A0A6H5KJF9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF9_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.840e-34 Identity = 83/249 (33.33%), Postives = 133/249 (53.41%), Query Frame = 0
Query: 1 MLSATTAAKDGELRNFDAEQTFLKADINEELYREISEKYQKFPGAVGQLNKAIYGL---------------------QGKADPCVFRKVVDGEAEVVVVVHVDDILAHAKDKVTIDRFAAELGQKSKLKDMGDVRYYMGCHITRNRKARKLKIDQHLYVESMVEKFDAEKVRKIPATSGVPTLSKTDEPRNPEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKKNGPAHKKAAMNIMQY 228
ML+A + +L +FD EQ F+++++ E++Y + + G + +L K++YGL Q AD CVFR + G +++VVHVDDI A ++ D+F A+L + +K++G++R+Y GC R+++ +L I Q + + + ++ + +P +SGV LS D EE FP+ E VG+LMW AT RPDIA+A+RAVAR+C H AM I+ Y
Sbjct: 1 MLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGEREKCDKFGADLNKSVPVKNLGELRWYSGCFYERSKETGRLTISQQTFTDELAAEYGVAGGKSVPMSSGV-KLSDFD-----ADEEATDFPFCELVGSLMWLATQIRPDIANAIRAVARYCASPKR-VHWDTAMGILGY 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172438.4459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig172438.4459.1 ID=prot_H-elongata_contig172438.4459.1|Name=mRNA_H-elongata_contig172438.4459.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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