prot_H-elongata_contig17140.4401.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17140.4401.1
Unique Nameprot_H-elongata_contig17140.4401.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length384
Homology
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 1.660e-122
Identity = 216/374 (57.75%), Postives = 264/374 (70.59%), Query Frame = 0
Query:    1 FLAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLGTFDFTVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHLCWRNKERVKELFARGIFWLITGPVAIAATAVLWAASLPLTLAWAARVLRAGGLSMTVPVILGISFNLGVAPLLTAWLWLLGMVDIWRVGDGVMETSDLNEIKVSRAQRRKIYAGSPTSSVANIAFAAITAKSSQGSASHTSDGMQXGEGGGGIKDSSKLWQEAAVLRGIGTADGATGARQQGFNVAVALRFSHGLTVQQLREALHDRSK 374
            FL Q+HSSLGPLMHS F ++ DL+RFGALMLV  LGF LAFYA+FGS SA LP+GGDI+ YDTY+SS+LTLF SMLG F F VF G PMAEAG  L+V FLC+MN+TLLNLLIAILAT HA++EGN+DKEAVLSEA+II QYRRAMR DSLP PLN+PQEL+  + WR+KER KE+FAR +FWL++GP+AIAAT          TLAWA RVLR+ G  M VP +LG+SFN+GVAP+ T WLWL G+  IW+ G G METSD NEI+ SRA RR  Y G P S +A +               +  +G Q      G   + KLWQ AA +     A GA   +  GFNV  A+R  HG+++QQL+E + D+ +
Sbjct:  786 FLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLPDGGDIAEYDTYYSSILTLFSSMLGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWRHKERAKEVFARAVFWLVSGPIAIAATXXXXXXXXXXTLAWAGRVLRSNGSLMLVPALLGVSFNVGVAPVATTWLWLRGVAGIWKQGHGTMETSDRNEIEASRAHRRGSYVGPPASPLAGVXXXXXXXXXXXXXGGN--EGRQRKPSSHGTP-AFKLWQRAADIG----AGGAGAVQHLGFNVVAAIRALHGMSMQQLKEQVDDQRR 1152          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: A0A6H5KCQ6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ6_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 3.780e-122
Identity = 210/372 (56.45%), Postives = 261/372 (70.16%), Query Frame = 0
Query:    3 AQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLGTFDFTVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHLCWRNKERVKELFARGIFWLITGPVAIAATAVLWAASLPLTLAWAARVLRAGGLSMTVPVILGISFNLGVAPLLTAWLWLLGMVDIWRVGDGVMETSDLNEIKVSRAQRRKIYAGSPTSSVANIAFAAITAKSSQGSASHTSDGMQXGEGGGGIKDSSKLWQEAAVLRGIGTADGATGARQQGFNVAVALRFSHGLTVQQLREALHDRSK 374
            A++HSSLGPLMHS F ++ DL+RFGALMLV  LGF LAFYA+FGS SA LP+GGDI+ YDTY+SS+LTLF SM G F F VF G PMAEAG  L+V FLC+MN+TLLNLLIAILAT HA++EGN+DKEAVLSEA+II QYRRAMR DSLP PLN+PQEL+  + WR+KER KE+FAR +FWL++GP+AIAAT            AWA R+LR+ G  M VP +LG+SFN+GVAP+ T WLWL G+  IW+ G G ME SD NEI+ SRA RR  Y G P S +A +A           +  +  +G Q      G   + KLWQ AA + G     GA   +  GFNV  A+R  HG+++QQL+E + D+ +
Sbjct:  466 ARVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLPDGGDIAEYDTYYSSILTLFSSMFGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWRHKERAKEVFARAVFWLVSGPIAIAATGXXXXXXXXXXXAWAGRMLRSNGSPMLVPALLGVSFNVGVAPVATTWLWLRGVAGIWQQGHGTMEMSDRNEIEASRAHRRGSYVGPPASPLAGVAXXXXXXXXXXXTGGN--EGRQRKPFSLGTP-AFKLWQRAADIGG----GGAGAVQHLGFNVVAAIRALHGMSMQQLKEQVDDQRR 830          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 3.070e-25
Identity = 82/210 (39.05%), Postives = 117/210 (55.71%), Query Frame = 0
Query:    1 FLAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLGTFDFT-VFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLC-HLCWRNKE-------RVKELFARGIFWLITGPVAIAATAVLWAAS 201
            F AQ+    GP++  +F M  +L +FG +++V +LGF ++F+ALFG             + DT+  + LTLF +MLG  DF   F G         L V++L ++ V LLNLLIA+L+T+H+KVEG +D+E  +S+A II  YR  +    LPPP NL Q +L   +  R++        R +E   R  FWL  GPVA A   VLW  S
Sbjct:  915 FFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFG-------------DVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLS 1111          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.560e-23
Identity = 84/245 (34.29%), Postives = 125/245 (51.02%), Query Frame = 0
Query:    1 FLAQIHSSLGPLMHS-----------MFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLGTFDF-TVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHLCW-----------------RNKERVKELFARG-------IFWLITGPVAIAATAVLWAAS-LPLTLAW 208
            F  QIH   GP++ +           +FRM   L +FG +M V +LGF +AF+ LF              ++D++  S L LF +MLG  DF  VFSG        FLLVV+L ++ V LLNLL+AIL+T+HA+V  N ++E  +S A ++  Y+  + +D LP P NL Q ++  + W                 + + R KE +A G       +FW++ GPVA+   ++LW  S LP    W
Sbjct:  855 FFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLF-------------RDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAMYFW 1086          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.980e-22
Identity = 78/230 (33.91%), Postives = 119/230 (51.74%), Query Frame = 0
Query:    1 FLAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLG-TFDFTVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHLCW-----------------RNKERVKELFARG-------IFWLITGPVAIAATAVLWAASLPLT 205
            F  QIH   GP++  +FRM   L +FG +M V ++GF +AF+ LF              ++D++  S L LF +M G T  F  FSG         LLVV+L ++ + LLNLL+AIL+T+H+KV+ N D+E   S A ++  Y+  + +D LP P NL Q ++  + W                 +   R +E + RG       +FW++ GPVA+    +LW  S PL+
Sbjct:  676 FFVQIHPLQGPMV--IFRMTTVLLKFGFVMAVVMIGFTMAFHVLF-------------RDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVSTPLS 890          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.760e-21
Identity = 81/257 (31.52%), Postives = 120/257 (46.69%), Query Frame = 0
Query:    1 FLAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFG--SPS-------------------------------AMLPEGGDIS----------------NYDTYFSSLLTLFGSMLGTFDFTVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHL---CWRNKERVKELFARG--IFWLITGPVAIAATAVLWAASLP 203
            FLAQI  +LG ++  +FRML+++ RFG ++ V +LGF +A +ALFG  +PS                                +L   GD S                ++ T+  S LT+F +M G FDF  F+G     AGV L+V FL +M + LLNLLIA L   H++V   +  +   +   I++ + R +  D LP PLNL     C L   C    +    +   G  +FWL+ GP+  A    +W  S+P
Sbjct:  987 FLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGSAPSLDXXXXXXXXXXXXXXXDTEGVLWFDRGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFAGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQHWNRVVEHDVLPSPLNLVHLATCVLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIP 1243          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 9.660e-21
Identity = 86/250 (34.40%), Postives = 124/250 (49.60%), Query Frame = 0
Query:    1 FLAQIHSSLGPLM---------------HSM-FRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLGTFDF-TVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHLCW-----------------RNKERVKELFARG-------IFWLITGPVAIAATAVLWAAS-LPLTLAW 208
            F  QIH   GP++               HS+ FRM   L +FG +M V +LGF +AF+  F              ++D++  S L LF +MLG  DF  VFSG        FLLVV L ++ V LLNLL+AIL+T+HA+V  N D+E  +S A ++  Y+  + +D LP P NL Q ++  + W                 + + R KE +A G       +FW++ GPVA+   ++LW  S LP    W
Sbjct:  124 FFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQF-------------RDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLWMESVLPAMYFW 360          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.060e-20
Identity = 87/245 (35.51%), Postives = 125/245 (51.02%), Query Frame = 0
Query:    2 LAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDIS-NYDTYFSSLLTLFGSMLGTFDFTVF-----------SGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELL-------CHLCW---RNKERV-----KELFA----------------RGIFWLITGPVAIAATAVLWAASLP 203
            L+QI S+LGP++  ++RML    RFG  ++V + GF LAF A+FGS  A    G D+  +Y ++ ++ LT+F + LG F F  F           S    ++AG FLLV +L ++ V +LNLLIA+L+T H +V  N +KE  L+   +I Q  RA+    +PPP NL Q ++         L W   R  +R      KE FA                R +F    G VA+   A+LW  SLP
Sbjct: 1164 LSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDA----GSDLDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLDGVSELAWWAVRGADRCGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLP 1404          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.500e-19
Identity = 83/242 (34.30%), Postives = 118/242 (48.76%), Query Frame = 0
Query:    1 FLAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSAMLPEGGDISNYDTYFSSLLTLFGSMLG-TFDFTVFSGTPMAEAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELL-----------CHLCWRNKER-----------------------------VKELFARGIFWLITGPVAIAATAVLWAAS 201
            F AQI    GP++  +FRM   L +FGA+MLV ++GF +A + +F      + + GD         +LL LF +MLG T  F  FSG         L+VV+L ++ V LLNLLIAIL+T HA+V+ N+     +S+A II  YR  + +D LP P NL Q LL           C L    +E+                              +  F + ++WL+ GPVA+A  A+LW  S
Sbjct:  853 FFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRD----VEDFGD---------TLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLS 1081          
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 6.860e-19
Identity = 75/206 (36.41%), Postives = 111/206 (53.88%), Query Frame = 0
Query:    2 LAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGS------PSAMLPEGGDISNYD---TYFSSLLTLFGSMLGTFDFTVFSGTPMA----------EAGVFLLVVFLCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDSLPPPLNLPQELLCHLCWRNKERVKELFARGIFWLITGP 188
            L+QI ++LGP+   ++RM+ D  RF A + V +L F LAF+A+F +      P+    +  D    D   T+  S +T+F + LG  DF ++                EAG+FL+VV++ +M V LLNLLIA+L+T H+KV  N DKE  L+ A +I Q  R +     PPPLNL + +L  L     E V+  F R   W++  P
Sbjct: 1233 LSQIDATLGPMTQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKVVLGTLIDATTEPVR--FRR---WMVRNP 1433          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17140.4401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM43_ECTSI1.660e-12257.75Ankyrin repeat Transient receptor potential channe... [more]
A0A6H5KCQ6_9PHAE3.780e-12256.45Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FLB1_ECTSI3.070e-2539.05Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5KJG3_9PHAE3.560e-2334.29Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JG42_9PHAE1.980e-2233.91Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJ53_9PHAE1.760e-2131.52Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JUV2_9PHAE9.660e-2134.40Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JB40_9PHAE1.060e-2035.51Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FZR6_ECTSI3.500e-1934.30Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LHA0_ECTSI6.860e-1936.41Transient Receptor Potential Channel. Partial sequ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 4..124
e-value: 5.8E-15
score: 55.2
NoneNo IPR availableGENE3D1.10.287.70coord: 8..124
e-value: 1.5E-7
score: 33.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..244
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 245..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..45
NoneNo IPR availableTMHMMTMhelixcoord: 222..244
NoneNo IPR availableTMHMMTMhelixcoord: 65..84
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
IPR024862Transient receptor potential cation channel subfamily VPANTHERPTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINcoord: 8..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17140contigH-elongata_contig17140:1596..7306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17140.4401.1mRNA_H-elongata_contig17140.4401.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17140 1596..7306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17140.4401.1 ID=prot_H-elongata_contig17140.4401.1|Name=mRNA_H-elongata_contig17140.4401.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=384bp
FLAQIHSSLGPLMHSMFRMLEDLSRFGALMLVFILGFGLAFYALFGSPSA
MLPEGGDISNYDTYFSSLLTLFGSMLGTFDFTVFSGTPMAEAGVFLLVVF
LCLMNVTLLNLLIAILATTHAKVEGNSDKEAVLSEALIIRQYRRAMRSDS
LPPPLNLPQELLCHLCWRNKERVKELFARGIFWLITGPVAIAATAVLWAA
SLPLTLAWAARVLRAGGLSMTVPVILGISFNLGVAPLLTAWLWLLGMVDI
WRVGDGVMETSDLNEIKVSRAQRRKIYAGSPTSSVANIAFAAITAKSSQG
SASHTSDGMQGGEGGGGIKDSSKLWQEAAVLRGIGTADGATGARQQGFNV
AVALRFSHGLTVQQLREALHDRSKVTDQVREHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR024862TRPV