prot_H-elongata_contig169171.4298.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig169171.4298.1
Unique Nameprot_H-elongata_contig169171.4298.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
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BLAST of mRNA_H-elongata_contig169171.4298.1 vs. uniprot
Match: D8LD76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD76_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 3.740e-26
Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:    1 ATPCQLEGRVEEWEPPKLADLRSAYRWKDEKKASMRKIRGFNKGGNELRELIHSEVVRLDLLRHDIFC 68
            A PC+LEGRVE W+PP  ADL+S+YRW DE+KASM +IR F +GG  LRELIH+EV+RLD+LRHD+FC
Sbjct:  347 AVPCRLEGRVENWKPPASADLKSSYRWNDEQKASMERIRRFTRGGTALRELIHAEVIRLDVLRHDLFC 414
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BLAST of mRNA_H-elongata_contig169171.4298.1 vs. uniprot
Match: A0A8J2STD5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STD5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.170e-8
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   10 VEEWEPPKLADLRSAYRWKDEKKASMRKIRGFNKGGNELRELIHSEVVRLDLLRHDIFC 68
            V  WEPP+ A L    +WK  K  S   IRGF +GG ELR  +  +V RL L RH++FC
Sbjct:  466 VARWEPPETARLEQIQQWKKLKAQSDAAIRGFARGGKELRAFVSDQVDRLRLARHNLFC 524
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig169171.4298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD76_ECTSI3.740e-2669.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2STD5_9STRA6.170e-847.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig169171contigH-elongata_contig169171:170..805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig169171.4298.1mRNA_H-elongata_contig169171.4298.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig169171 170..805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig169171.4298.1 ID=prot_H-elongata_contig169171.4298.1|Name=mRNA_H-elongata_contig169171.4298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
ATPCQLEGRVEEWEPPKLADLRSAYRWKDEKKASMRKIRGFNKGGNELRE
LIHSEVVRLDLLRHDIFCP*
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