prot_H-elongata_contig1681.4249.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1681.4249.1
Unique Nameprot_H-elongata_contig1681.4249.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 6.740e-66
Identity = 129/301 (42.86%), Postives = 172/301 (57.14%), Query Frame = 0
Query:    9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV--------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            AA E+EIASLK+   Y+LVP ++VP G++ + S+WV K KA   FK R V   W QVP +DCG T+APV R Q+IRM   +A + + E+  ++V                                      LYGL Q P NWF TID  L  IGF  LKSD CVYL         L LYVD++LL G N + +  +KK+L  RF+MTD+G V  VLGM + RDR+   +TI Q+ Y++ IL R+GM+ C    TP   +E+   QP D LL ++E +RYQ I G L+Y+AQV RY+I+YA
Sbjct:  476 AAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLSEEETRRYQGIVGCLIYIAQVLRYDIMYA 776          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 6.390e-62
Identity = 125/274 (45.62%), Postives = 164/274 (59.85%), Query Frame = 0
Query:    9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDY----------EVLMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            AA E+E+ SL     Y+LVP S VP  ++ + S+WV K KAD  FK R V   W QVP +DCG T+APV R+Q++RM   +    +            V+ LN  LYGL Q P NWF TID  L  IGF +LKSDPCVYL         L LYVD++LL G +   +  +K +L  RF+MTDLG    VL M + RDR+   +TI Q+ Y + IL R+GM+      TP   +EI   QP D LLD++E ++YQ I G+LMY+AQV RY+I+YA
Sbjct:  526 AAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYA 799          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 6.750e-59
Identity = 126/301 (41.86%), Postives = 169/301 (56.15%), Query Frame = 0
Query:    9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLD----------------------------YEV---------LMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            AA E+E+ SL     Y+LVP S+VP  ++ + S+WV K KAD  FK R V   W QVP +DCG T+APV R+Q++RM   +  + +                            +EV         + LN  LYGL Q P NWF TID  L  IGF +LKSDPCVYL         L LYVD++LL G +   +  +K +L  RF+MTDLG    VLGM + RDR+   +TI Q+ Y + IL R+G++      TP   +EI   QP D LLD++E ++YQ I G+LMY+AQV RY+I+YA
Sbjct: 1168 AAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYA 1468          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 5.650e-58
Identity = 124/300 (41.33%), Postives = 159/300 (53.00%), Query Frame = 0
Query:   10 ATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV--------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            A E+EIASLK+   ++LVP ++VP G++ + S+WV K KAD  FK R VV  W QVP +D G TFAPV RLQ+IRM    A + + E+  ++V                                      LYGL Q P NWF TID  L  IGF  LKSD C+YL         L LYVD++LL G N   +  +KK+L  RF MTD+G V  VLGM + RDR+                 R+GM+ C    TP   +E+   QP D LL ++E  RYQ I G LMY+AQV RY+I+YA
Sbjct:   68 AAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPLLVEIGFVPLKSDTCIYLYDHDDVQVYLTLYVDDLLLAGDNSNAISTIKKKLKQRFNMTDMGGVKLVLGMEIKRDRNQE---------------RFGMSECKPTSTPGYGSELSKKQPEDTLLGEEETGRYQDIVGCLMYIAQVLRYDIMYA 352          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 9.640e-57
Identity = 126/311 (40.51%), Postives = 168/311 (54.02%), Query Frame = 0
Query:   12 EKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLD----------------------------YEV---------LMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQL----------LGKLKKQ---LMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            ++E+ SL     Y+LVP S+VP G++ + S+WV K KAD  FK R V   W QVP +DCG T+APV R+Q++RM   +  + +                            +EV         + LN  LYGL Q P NWF TID  L  IGF +LKSDPCVYL         L LYVD++LL G +             LG + +Q   L  RF+MTDLG     LGM + RDR+   +TI Q+ Y + IL R+GM+      TP   +EI   QP D LLD++E ++YQ I G+LMY+AQV RY+I+YA
Sbjct:  150 KREMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYA 460          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 3.860e-54
Identity = 118/314 (37.58%), Postives = 180/314 (57.32%), Query Frame = 0
Query:    1 MSLPQTAQ--AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV---------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILIL--YVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            MS PQ  +   A  KE+ +L+K+  Y LVP SSVP G++++G+++V K K D  FK+R VV    Q P  D G ++APV R+ +IRMT A+    ++ +  L+V                                       LYGL Q P  W  T+D+ L+  G++  +SDPCVY+    +GN I+IL  YVD+IL+ G ++QL+ + KK+L  RFEMTD+G V ++LG+ V RD +   + I Q++Y   +L R+GM   N   TP   AEI  +QP D++L   +K+ YQS+TG+++Y+AQ +R+++ YA
Sbjct:  349 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVY--TSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYA 660          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 2.860e-53
Identity = 119/296 (40.20%), Postives = 160/296 (54.05%), Query Frame = 0
Query:    9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLD----------------------------YEV---------LMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRY 266
            AA E+E+ SL     Y+LVP S+VP  ++ + S+WV K KAD  FK R V   W QVP +DCG T+APV R+Q++RM   +  + +                            +EV         + LN  LYGL Q P NWF TID  L  IGF +LKSDPCVYL         L LYVD++LL G +   +  +K +L  RF+MTDLG    VLGM + RDR+   +TI Q+ Y + IL R+GM+      TP   +EI   QP   LLD++E ++YQ I G+ MY+A   +Y
Sbjct: 1333 AAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQY 1628          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 5.330e-53
Identity = 116/314 (36.94%), Postives = 178/314 (56.69%), Query Frame = 0
Query:    1 MSLPQTAQ--AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV---------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILIL--YVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            MS PQ  +   A  KE+ +L+K+  Y LVP SSVP G++++G+++  K   D  FK+R VV    Q P  D G ++APV R+ +IRMT A+    ++ +  L+V                                       LYGL Q P  W  T+D+ L+  G++  +SDPCVY+    +GN I+IL  YVD+IL+ G ++QL+ + KK+L  RFEMTD+G V ++LG+ V RD +   + I Q++Y   +L R+GM   N   TP   AEI  +QP D++L   +K+ YQS+TG+++Y+AQ +R+++ YA
Sbjct:  392 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFAFKRTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNYATGEPMMYELERSLYGLSQYPALWKDTLDESLTVFGWKRTQSDPCVYVY--TSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYA 703          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 5.190e-52
Identity = 115/301 (38.21%), Postives = 149/301 (49.50%), Query Frame = 0
Query:    9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV--------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            AA E+EIASLK+   Y+LVP ++VP G++ + S+WV K KAD  FK R V   W QVP +DCG T+APV RLQ+IRM   +  + + E+  ++V                                      LYGL QI  NWF TID  L        KSD CVYL                                     F+MTD+G V  VLGM + RD +   +TI QK YT+ IL R+GM+ C    TP   +E+   QP D LL ++E +RYQ I G LMY+AQV RY+I+YA
Sbjct:   67 AAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDTCVYL-------------------------------------FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYA 330          
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 8.270e-52
Identity = 115/314 (36.62%), Postives = 178/314 (56.69%), Query Frame = 0
Query:    1 MSLPQTAQ--AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV---------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILIL--YVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
            MS PQ  +   A  KE+ +L+K+  Y LVP SSVP G++++G+++V K   D  FK+R VV    Q P  D G ++APV R+ +IRMT A+    ++ +  L+V                                       LYGL Q    W  T+D+ L+ +G++  +SDPCVY+    +GN I+IL  YVD+IL+ G ++QL+ + KK+L  RFEMTD+G V ++LG+ V RD +   + I Q++Y   +L R+GM   N   TP   AEI  +QP D++L   +K+ YQS+ G+++Y+AQ +R+++ YA
Sbjct:  193 MSSPQREEWKGACSKEMYNLRKHNVYILVPLSSVPEGEKILGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVY--TSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYA 504          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL37_9PHAE6.740e-6642.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNH5_9PHAE6.390e-6245.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE6.750e-5941.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWT4_9PHAE5.650e-5841.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE9.640e-5740.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE3.860e-5437.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J842_9PHAE2.860e-5340.20Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5K7T8_9PHAE5.330e-5336.94Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KPN4_9PHAE5.190e-5238.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE8.270e-5236.62Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 31..101
e-value: 4.0E-11
score: 43.0
coord: 102..226
e-value: 1.2E-23
score: 84.1
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 15..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1681contigH-elongata_contig1681:9043..9985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1681.4249.1mRNA_H-elongata_contig1681.4249.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1681 9007..10546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1681.4249.1 ID=prot_H-elongata_contig1681.4249.1|Name=mRNA_H-elongata_contig1681.4249.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MSLPQTAQAATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKAD
NLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLML
NVLYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILY
VDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMI
TIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRY
QSITGALMYVAQVSRYEILYAIN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2