prot_H-elongata_contig1681.4249.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 229 bits (584), Expect = 6.740e-66 Identity = 129/301 (42.86%), Postives = 172/301 (57.14%), Query Frame = 0
Query: 9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV--------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
AA E+EIASLK+ Y+LVP ++VP G++ + S+WV K KA FK R V W QVP +DCG T+APV R Q+IRM +A + + E+ ++V LYGL Q P NWF TID L IGF LKSD CVYL L LYVD++LL G N + + +KK+L RF+MTD+G V VLGM + RDR+ +TI Q+ Y++ IL R+GM+ C TP +E+ QP D LL ++E +RYQ I G L+Y+AQV RY+I+YA
Sbjct: 476 AAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLSEEETRRYQGIVGCLIYIAQVLRYDIMYA 776
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 220 bits (560), Expect = 6.390e-62 Identity = 125/274 (45.62%), Postives = 164/274 (59.85%), Query Frame = 0
Query: 9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDY----------EVLMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
AA E+E+ SL Y+LVP S VP ++ + S+WV K KAD FK R V W QVP +DCG T+APV R+Q++RM + + V+ LN LYGL Q P NWF TID L IGF +LKSDPCVYL L LYVD++LL G + + +K +L RF+MTDLG VL M + RDR+ +TI Q+ Y + IL R+GM+ TP +EI QP D LLD++E ++YQ I G+LMY+AQV RY+I+YA
Sbjct: 526 AAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYA 799
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 212 bits (540), Expect = 6.750e-59 Identity = 126/301 (41.86%), Postives = 169/301 (56.15%), Query Frame = 0
Query: 9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLD----------------------------YEV---------LMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
AA E+E+ SL Y+LVP S+VP ++ + S+WV K KAD FK R V W QVP +DCG T+APV R+Q++RM + + + +EV + LN LYGL Q P NWF TID L IGF +LKSDPCVYL L LYVD++LL G + + +K +L RF+MTDLG VLGM + RDR+ +TI Q+ Y + IL R+G++ TP +EI QP D LLD++E ++YQ I G+LMY+AQV RY+I+YA
Sbjct: 1168 AAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYA 1468
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE) HSP 1 Score: 203 bits (517), Expect = 5.650e-58 Identity = 124/300 (41.33%), Postives = 159/300 (53.00%), Query Frame = 0
Query: 10 ATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV--------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
A E+EIASLK+ ++LVP ++VP G++ + S+WV K KAD FK R VV W QVP +D G TFAPV RLQ+IRM A + + E+ ++V LYGL Q P NWF TID L IGF LKSD C+YL L LYVD++LL G N + +KK+L RF MTD+G V VLGM + RDR+ R+GM+ C TP +E+ QP D LL ++E RYQ I G LMY+AQV RY+I+YA
Sbjct: 68 AAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPLLVEIGFVPLKSDTCIYLYDHDDVQVYLTLYVDDLLLAGDNSNAISTIKKKLKQRFNMTDMGGVKLVLGMEIKRDRNQE---------------RFGMSECKPTSTPGYGSELSKKQPEDTLLGEEETGRYQDIVGCLMYIAQVLRYDIMYA 352
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 202 bits (513), Expect = 9.640e-57 Identity = 126/311 (40.51%), Postives = 168/311 (54.02%), Query Frame = 0
Query: 12 EKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLD----------------------------YEV---------LMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQL----------LGKLKKQ---LMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
++E+ SL Y+LVP S+VP G++ + S+WV K KAD FK R V W QVP +DCG T+APV R+Q++RM + + + +EV + LN LYGL Q P NWF TID L IGF +LKSDPCVYL L LYVD++LL G + LG + +Q L RF+MTDLG LGM + RDR+ +TI Q+ Y + IL R+GM+ TP +EI QP D LLD++E ++YQ I G+LMY+AQV RY+I+YA
Sbjct: 150 KREMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYA 460
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 197 bits (501), Expect = 3.860e-54 Identity = 118/314 (37.58%), Postives = 180/314 (57.32%), Query Frame = 0
Query: 1 MSLPQTAQ--AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV---------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILIL--YVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
MS PQ + A KE+ +L+K+ Y LVP SSVP G++++G+++V K K D FK+R VV Q P D G ++APV R+ +IRMT A+ ++ + L+V LYGL Q P W T+D+ L+ G++ +SDPCVY+ +GN I+IL YVD+IL+ G ++QL+ + KK+L RFEMTD+G V ++LG+ V RD + + I Q++Y +L R+GM N TP AEI +QP D++L +K+ YQS+TG+++Y+AQ +R+++ YA
Sbjct: 349 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVY--TSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYA 660
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 196 bits (498), Expect = 2.860e-53 Identity = 119/296 (40.20%), Postives = 160/296 (54.05%), Query Frame = 0
Query: 9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLD----------------------------YEV---------LMLNV-LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRY 266
AA E+E+ SL Y+LVP S+VP ++ + S+WV K KAD FK R V W QVP +DCG T+APV R+Q++RM + + + +EV + LN LYGL Q P NWF TID L IGF +LKSDPCVYL L LYVD++LL G + + +K +L RF+MTDLG VLGM + RDR+ +TI Q+ Y + IL R+GM+ TP +EI QP LLD++E ++YQ I G+ MY+A +Y
Sbjct: 1333 AAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQY 1628
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE) HSP 1 Score: 194 bits (492), Expect = 5.330e-53 Identity = 116/314 (36.94%), Postives = 178/314 (56.69%), Query Frame = 0
Query: 1 MSLPQTAQ--AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV---------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILIL--YVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
MS PQ + A KE+ +L+K+ Y LVP SSVP G++++G+++ K D FK+R VV Q P D G ++APV R+ +IRMT A+ ++ + L+V LYGL Q P W T+D+ L+ G++ +SDPCVY+ +GN I+IL YVD+IL+ G ++QL+ + KK+L RFEMTD+G V ++LG+ V RD + + I Q++Y +L R+GM N TP AEI +QP D++L +K+ YQS+TG+++Y+AQ +R+++ YA
Sbjct: 392 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFAFKRTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNYATGEPMMYELERSLYGLSQYPALWKDTLDESLTVFGWKRTQSDPCVYVY--TSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYA 703
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE) HSP 1 Score: 184 bits (468), Expect = 5.190e-52 Identity = 115/301 (38.21%), Postives = 149/301 (49.50%), Query Frame = 0
Query: 9 AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV--------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILILYVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
AA E+EIASLK+ Y+LVP ++VP G++ + S+WV K KAD FK R V W QVP +DCG T+APV RLQ+IRM + + + E+ ++V LYGL QI NWF TID L KSD CVYL F+MTD+G V VLGM + RD + +TI QK YT+ IL R+GM+ C TP +E+ QP D LL ++E +RYQ I G LMY+AQV RY+I+YA
Sbjct: 67 AAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDTCVYL-------------------------------------FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYA 330
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 189 bits (480), Expect = 8.270e-52 Identity = 115/314 (36.62%), Postives = 178/314 (56.69%), Query Frame = 0
Query: 1 MSLPQTAQ--AATEKEIASLKKYGAYELVPASSVPAGQRVVGSRWVNKIKADNLFKSRRVVLEWAQVPEIDCGGTFAPVYRLQNIRMTLAVAAKLDYEVLMLNV---------------------------------------LYGLRQIPKNWFGTIDDHLSTIGFRSLKSDPCVYLLGDITGNAILIL--YVDEILLLGKNKQLLGKLKKQLMGRFEMTDLGNVWKVLGMIVTRDRDNAMITIGQKNYTEDILARYGMTHCNVALTPDVVAEIFFDQPTDRLLDKQEKQRYQSITGALMYVAQVSRYEILYA 271
MS PQ + A KE+ +L+K+ Y LVP SSVP G++++G+++V K D FK+R VV Q P D G ++APV R+ +IRMT A+ ++ + L+V LYGL Q W T+D+ L+ +G++ +SDPCVY+ +GN I+IL YVD+IL+ G ++QL+ + KK+L RFEMTD+G V ++LG+ V RD + + I Q++Y +L R+GM N TP AEI +QP D++L +K+ YQS+ G+++Y+AQ +R+++ YA
Sbjct: 193 MSSPQREEWKGACSKEMYNLRKHNVYILVPLSSVPEGEKILGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVY--TSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYA 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1681.4249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig1681.4249.1 ID=prot_H-elongata_contig1681.4249.1|Name=mRNA_H-elongata_contig1681.4249.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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