prot_H-elongata_contig165812.4145.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig165812.4145.1
Unique Nameprot_H-elongata_contig165812.4145.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.500e-31
Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 0
Query:    1 KALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQGGGICLDDGDAPDLMDIEVHMNTIDSSQ 69
            +ALKK+GKEWKRVACMV+TRTVVQTRTHAQKYFQKLTKAA GGGI L+DG+ PDLMDIEVHMNTID SQ
Sbjct:  761 RALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLEDGEGPDLMDIEVHMNTIDPSQ 829          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 7.120e-16
Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 KALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAA 40
            KALKK+GKEWKRVACMV+TRTVVQTRTHAQKYFQKLTKAA
Sbjct:  239 KALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAA 278          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A835YHT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.960e-15
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 KALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQGGGICLDD 49
            KAL  +GKEWKRVA MV TRTVVQTRTHAQKYFQKL K + G   CLDD
Sbjct:   42 KALGVYGKEWKRVAAMVGTRTVVQTRTHAQKYFQKLQKTSGGEMECLDD 90          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A1E7FKC4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKC4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.480e-13
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 LKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQ 41
            LK +GKEWK+VA  VKTRTVVQTRTHAQKYFQKL+KA +
Sbjct:   14 LKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLSKATE 52          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A7S3HM63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM63_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.620e-13
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    2 ALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKA 39
            ALKK+GKEWK+VA MVKTRTVVQTRTHAQKYFQKLTK+
Sbjct:   32 ALKKYGKEWKKVAGMVKTRTVVQTRTHAQKYFQKLTKS 69          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: B8C5L1_THAPS (MYB DNA binding protein/ transcription factor-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5L1_THAPS)

HSP 1 Score: 63.5 bits (153), Expect = 5.760e-12
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    2 ALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQ 41
            AL+ +GKEWK+VA  VKTRTVVQTRTHAQKYFQKL K  +
Sbjct:   13 ALQVYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLQKVLE 52          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO)

HSP 1 Score: 67.4 bits (163), Expect = 2.110e-11
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    3 LKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQGGG 44
            LK +GKEWK+VA  VKTRTVVQTRTHAQKYFQKL K A+  G
Sbjct:  136 LKMYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLHKTAEDSG 177          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A7S4RBR2_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBR2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.120e-11
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    2 ALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQGGGICLDDGDAPDLMDIEV 60
            AL+ +GKEWK+VA  VKTRTVVQTRTHAQKYFQKL KA          GD  ++ DIE+
Sbjct:  220 ALQLYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLQKAMVNSS-----GDKEEIADIEM 273          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.890e-11
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    3 LKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQG 42
            +K +GKEWK+VA  VKTRTVVQTRTHAQKYFQKL KA +G
Sbjct:  122 IKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLAKANEG 161          
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Match: A0A7S3Q3P5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3P5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 7.360e-11
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 ALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQGGGICLDDGD 51
            AL+++GKEWK+VA  VKTRTVVQTRTHAQKYFQKL K     G+  D GD
Sbjct:   82 ALQQYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLQK-----GLANDKGD 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165812.4145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG60_ECTSI1.500e-3186.96Histone deactylase of possible bacterial origin wi... [more]
A0A6H5K5H7_9PHAE7.120e-1695.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHT8_9STRA4.960e-1575.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7FKC4_9STRA3.480e-1379.49Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S3HM63_9STRA8.620e-1389.47Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B8C5L1_THAPS5.760e-1275.00MYB DNA binding protein/ transcription factor-like... [more]
A0A1Z5JSY0_FISSO2.110e-1176.19Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4RBR2_9STRA2.120e-1161.02Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A448YY97_9STRA2.890e-1177.50Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3Q3P5_9STRA7.360e-1168.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 1..38
e-value: 5.4E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 2..48
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 2..48
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..37
score: 11.602
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig165812contigH-elongata_contig165812:677..1347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig165812.4145.1mRNA_H-elongata_contig165812.4145.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig165812 677..1347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig165812.4145.1 ID=prot_H-elongata_contig165812.4145.1|Name=mRNA_H-elongata_contig165812.4145.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
KALKKFGKEWKRVACMVKTRTVVQTRTHAQKYFQKLTKAAQGGGICLDDG
DAPDLMDIEVHMNTIDSSQVLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf