prot_H-elongata_contig164495.4071.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig164495.4071.1
Unique Nameprot_H-elongata_contig164495.4071.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: D8LBT0_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 4.220e-54
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 0
Query:    1 EPRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            EPRWAS NLG+FICL+CSG+HRNLGVHISFVRSVNLDTWK +QVKGMEEMGNERAKAHFEA VP  Y VPREHATVREREKWIRDKYE RRFVSR+P
Sbjct:   29 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNP 125          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A6H5L3P5_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.040e-52
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 0
Query:    1 EPRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            EPRWAS NLG+FICL+CSG+HRNLGVHISFVRSVNLDTWK +QV+GMEEMGNERAKAHFEA VP  Y VPREHATVREREKWIRDKYE RRFVSR P
Sbjct:   29 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRSP 125          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A836C8F7_9STRA (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA)

HSP 1 Score: 153 bits (387), Expect = 7.370e-46
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 0
Query:    1 EPRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            EPRWAS NLG+FICL CSG+HRNLGVHISFVRSVNLDTWK+ QV  ME +GN RAKA++EA VPPG PVP E ++VRE +KWIR KYE +R+++R P
Sbjct:   29 EPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTESSSVRELDKWIRSKYEHKRYIARGP 125          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A7S3UXM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK)

HSP 1 Score: 150 bits (378), Expect = 4.100e-44
Identity = 67/97 (69.07%), Postives = 80/97 (82.47%), Query Frame = 0
Query:    1 EPRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            EPRWASA LGVF+C+ CSG+HRNLGVHISFVRSVNLD+W+   V+ ME  GN RA+A+FEA VP  YP+P E +T RE EKWIRDKYE RRF++R+P
Sbjct:   42 EPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGERSTTREVEKWIRDKYEHRRFLAREP 138          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A7S2UT74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT74_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.870e-40
Identity = 66/97 (68.04%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 EPRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            EPRWASA LGVFIC+ CSG+HRNLGVHISFVRSVNLDTWK   V+ ME  GN RA  +FEA VPP Y +P E ++ RE E+WIRDKYE+R+F +R+P
Sbjct:   42 EPRWASATLGVFICIRCSGIHRNLGVHISFVRSVNLDTWKEDHVRKMEAWGNARAAEYFEADVPPNYRIPDEKSSTRELERWIRDKYEYRKFAARNP 138          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: G5A4X3_PHYSP (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP)

HSP 1 Score: 140 bits (352), Expect = 3.990e-40
Identity = 62/96 (64.58%), Postives = 78/96 (81.25%), Query Frame = 0
Query:    2 PRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            PRWAS NLGVFIC+ CSG+HR+LGVH++FVRSVNLD+W S QV+ M+  GN RAKA++EA VP  Y +P EH++VRE+E WIR+KYE +RFV   P
Sbjct:   40 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEHSSVREKEMWIREKYERKRFVGEAP 135          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A3F2RQV0_9STRA (Arf-GAP domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.890e-38
Identity = 62/96 (64.58%), Postives = 79/96 (82.29%), Query Frame = 0
Query:    2 PRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDP 97
            PRWAS NLGVFIC+ CSG+HR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKA++EA VP  Y +P EHA+VRE+E WIR+KYE +RFV ++P
Sbjct:   39 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEHASVREKEMWIREKYERKRFVGQEP 134          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A8K1FL28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL28_PYTOL)

HSP 1 Score: 142 bits (358), Expect = 7.820e-38
Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    2 PRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRD 96
            PRWAS NLGVFIC+ CSG+HR+LGVH++FVRSVNLD+W S QV  M++ GN RAKA++EA VP  Y +P EH++VRE+E WIRDKYE +RFV RD
Sbjct:   39 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVAQMQKWGNGRAKAYYEATVPRDYRIPTEHSSVREKEMWIRDKYERKRFVGRD 133          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: M4C531_HYAAE (Arf-GAP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C531_HYAAE)

HSP 1 Score: 140 bits (352), Expect = 1.110e-37
Identity = 62/92 (67.39%), Postives = 77/92 (83.70%), Query Frame = 0
Query:    2 PRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFV 93
            PRWAS NLGVFIC+ CSG+HR+LGVH++FVRSVNLD+W + QV+ M+  GN RAKAHFEA +P  Y VP EH++VR++E WIRDKYE +RFV
Sbjct:   41 PRWASINLGVFICIACSGIHRSLGVHVTFVRSVNLDSWTTEQVQQMQRWGNARAKAHFEAALPSDYFVPSEHSSVRDKELWIRDKYERKRFV 132          
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Match: A0A397D8K1_9STRA (Arf-GAP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D8K1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.070e-37
Identity = 60/95 (63.16%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    2 PRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEMGNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRD 96
            PRWAS NLGVFIC+ CSG+HR+LGVH++FVRSVNLD+W   QV  M++ GN +AK +FEA VP  Y +P EH+ VR++E WIRDKYE +RF++RD
Sbjct:   39 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTGDQVAQMQKWGNAKAKDYFEALVPKDYRIPTEHSPVRDKEIWIRDKYERKRFIARD 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig164495.4071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBT0_ECTSI4.220e-5487.63Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L3P5_9PHAE3.040e-5286.60Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836C8F7_9STRA7.370e-4671.13Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S3UXM8_HETAK4.100e-4469.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2UT74_9STRA1.870e-4068.04Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
G5A4X3_PHYSP3.990e-4064.58Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A3F2RQV0_9STRA6.890e-3864.58Arf-GAP domain-containing protein n=1 Tax=Phytopht... [more]
A0A8K1FL28_PYTOL7.820e-3867.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4C531_HYAAE1.110e-3767.39Arf-GAP domain-containing protein n=1 Tax=Hyaloper... [more]
A0A397D8K1_9STRA3.070e-3763.16Arf-GAP domain-containing protein n=1 Tax=Aphanomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 10..27
score: 64.75
coord: 31..52
score: 40.44
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 1..100
e-value: 4.5E-26
score: 102.6
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 1..95
e-value: 9.0E-32
score: 109.6
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..100
score: 22.894
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..100
e-value: 2.8E-38
score: 132.9
NoneNo IPR availablePANTHERPTHR45705FAMILY NOT NAMEDcoord: 1..113
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig164495contigH-elongata_contig164495:497..1154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig164495.4071.1mRNA_H-elongata_contig164495.4071.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig164495 497..1154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig164495.4071.1 ID=prot_H-elongata_contig164495.4071.1|Name=mRNA_H-elongata_contig164495.4071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
EPRWASANLGVFICLECSGVHRNLGVHISFVRSVNLDTWKSSQVKGMEEM
GNERAKAHFEAGVPPGYPVPREHATVREREKWIRDKYEFRRFVSRDPPPP
QRNQDDSSESRSSRRVCAKGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO