prot_H-elongata_contig162478.3967.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162478.3967.1
Unique Nameprot_H-elongata_contig162478.3967.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: D7G3R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R1_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 1.350e-50
Identity = 86/101 (85.15%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGEPIVNSPQ 107
            REDFRPFAPSVL EEA  WFEGLPPDGSPYMSLTAPAKPGVA+ VPAVCHVD SSRLQTV E+ +PLYHRLI+AF+ +TGVPMVLNTSFNVMGEPIV+SPQ
Sbjct:  657 REDFRPFAPSVLAEEAEDWFEGLPPDGSPYMSLTAPAKPGVAERVPAVCHVDWSSRLQTVTEESSPLYHRLITAFFKMTGVPMVLNTSFNVMGEPIVDSPQ 757          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A835ZBM7_9STRA (Carbamoyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.880e-48
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    6 VREDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGEPIVNSPQ 107
            +REDFRPFAPSVLEE AG WF+GL  DGSPYMSLT PAKPG  + +PAVCHVDGSSR+QTV++  NPLYHRLISAF+  TGVPMVLNTSFN+ GEPIV+SP+
Sbjct:  171 MREDFRPFAPSVLEEFAGEWFDGLTGDGSPYMSLTVPAKPGKREQIPAVCHVDGSSRIQTVQQAANPLYHRLISAFHRATGVPMVLNTSFNIKGEPIVDSPE 272          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7S0JFX1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JFX1_9EUKA)

HSP 1 Score: 138 bits (347), Expect = 2.220e-39
Identity = 67/100 (67.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGEPIVNSP 106
            RE +RP APSVL E A  WF+G+P  GSPYMS TA AK  + +++PAV HVDGS+RLQTV     PLYH LISAFY+L+GVPMVLNTSFN+ GEPIV SP
Sbjct:   33 REQWRPLAPSVLAERADEWFDGVPDGGSPYMSFTAYAKEHMREAIPAVVHVDGSARLQTVASSTAPLYHALISAFYALSGVPMVLNTSFNLAGEPIVESP 132          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A0G4FRZ2_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FRZ2_VITBC)

HSP 1 Score: 142 bits (357), Expect = 5.010e-37
Identity = 66/100 (66.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGEPIVNSP 106
            RE FRPFAPSV+ EEA GWFE LP  GSPYMS+TA  +      VPAVCHVDG++RLQTVRE D PL++RL+  F+ LTG+PMV+NTSFN+ GEPIV  P
Sbjct:  602 REAFRPFAPSVIAEEADGWFEDLPECGSPYMSITAAVREERRGLVPAVCHVDGTARLQTVRESDEPLFYRLLQQFFKLTGIPMVVNTSFNIKGEPIVEEP 701          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7S3TJZ8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TJZ8_EMIHU)

HSP 1 Score: 130 bits (326), Expect = 9.390e-35
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVM-GEPIVNSP 106
            RE FRPFAPSVL E AG WFEG+PP GSPYMS   P K    D++PAVCHVDGS+RLQTV  + +P +  LI+AF++LTGVP+VLNTSFN    EPIV  P
Sbjct:  110 REPFRPFAPSVLAEHAGDWFEGVPPSGSPYMSFALPCKR--RDAIPAVCHVDGSARLQTVGGEADPRWRALIAAFFALTGVPLVLNTSFNTRPAEPIVEGP 208          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7S4WGL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WGL8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.770e-33
Identity = 67/105 (63.81%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFE----GLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVM-GEPIVNSP 106
            RE FRPFAPS L EEA  WF+        + SPYMS+TA  K      +PAV HVDGSSRLQTV  K  PLYHRLISAF+ LTGVPMVLNTSFN + GEPIV +P
Sbjct:   91 RESFRPFAPSCLAEEASNWFDLGDNDFNDNVSPYMSITANVKESKRGQIPAVTHVDGSSRLQTVTAKAEPLYHRLISAFFDLTGVPMVLNTSFNTLKGEPIVETP 195          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7S2KMJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KMJ5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.300e-32
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVM-GEPIVNSPQ 107
            RE FRPFAPSVL E A  WF     + SPYMS+T   +   A  +P+V H+D SSRLQTV E+D PLYH+LISAF+  TGVP+VLNTSFN + GEPIV +P+
Sbjct:   34 RESFRPFAPSVLAEHADEWFVDTADNVSPYMSMTTLVRGEKASEIPSVTHIDRSSRLQTVTEEDEPLYHKLISAFHEATGVPLVLNTSFNTLKGEPIVETPE 135          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7C8ALU7_9BACT (Carbamoyltransferase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8ALU7_9BACT)

HSP 1 Score: 119 bits (299), Expect = 5.450e-32
Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGEPIVNSP 106
            RE+FRPFAPSVLEE+AG +F G     SP+M    P   G  D++PAV H DG++R+QTV  + +P Y+RLI AF    GVPMVLNTSFNVMGEPIVNSP
Sbjct:   64 REEFRPFAPSVLEEKAGEYFAGCVQ--SPFMLFVYPVVRGKRDTIPAVTHADGTARVQTVSREVHPRYYRLIEAFEKRRGVPMVLNTSFNVMGEPIVNSP 161          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7C1BAG6_9FIRM (Carbamoyltransferase (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C1BAG6_9FIRM)

HSP 1 Score: 120 bits (300), Expect = 1.150e-31
Identity = 61/100 (61.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGEPIVNSP 106
            RE +RP APS+LEE  G WFE   P  SP+M+L    K GV + VP+V H DGS+R+QTV    NPLYHRLIS F  LTGVP+VLNTSFN  GEPIV +P
Sbjct:  105 RELWRPLAPSILEERVGDWFENAYP--SPFMNLNLFFKAGVKEKVPSVVHADGSARVQTVSRHTNPLYHRLISEFEKLTGVPIVLNTSFNTRGEPIVCTP 202          
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Match: A0A7S2EC10_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC10_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.670e-31
Identity = 67/105 (63.81%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    7 REDFRPFAPSVLEEEAGGWFE----GLPPDGSPYMSLTAPAKPGVADSVPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVM-GEPIVNSP 106
            RE FRPFAPS L EEA  WF+        + SPYMS+TA  K      +PAV HVDGSSRLQTV  K  PLYHRLISAF+ LTGVPMVLNTSFN + GEPIV +P
Sbjct:  544 RESFRPFAPSCLAEEASNWFDLGDNDFNDNVSPYMSITANVKESKRGQIPAVTHVDGSSRLQTVTAKAEPLYHRLISAFFDLTGVPMVLNTSFNTLKGEPIVETP 648          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162478.3967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3R1_ECTSI1.350e-5085.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZBM7_9STRA2.880e-4876.47Carbamoyltransferase-domain-containing protein n=1... [more]
A0A7S0JFX1_9EUKA2.220e-3967.00Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A0G4FRZ2_VITBC5.010e-3766.00Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S3TJZ8_EMIHU9.390e-3564.36Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S4WGL8_9STRA6.770e-3363.81Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2KMJ5_9STRA3.300e-3259.80Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7C8ALU7_9BACT5.450e-3261.00Carbamoyltransferase n=1 Tax=Candidatus Hydrogened... [more]
A0A7C1BAG6_9FIRM1.150e-3161.00Carbamoyltransferase (Fragment) n=1 Tax=Firmicutes... [more]
A0A7S2EC10_9STRA1.670e-3163.81Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038152Carbamoyltransferase, C-terminal domain superfamilyGENE3D3.90.870.20coord: 5..107
e-value: 8.3E-41
score: 141.4
IPR031730Carbamoyltransferase, C-terminalPFAMPF16861Carbam_trans_Ccoord: 7..107
e-value: 4.6E-38
score: 130.5
NoneNo IPR availablePANTHERPTHR34847FAMILY NOT NAMEDcoord: 7..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162478contigH-elongata_contig162478:315..1097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162478.3967.1mRNA_H-elongata_contig162478.3967.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162478 288..1097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162478.3967.1 ID=prot_H-elongata_contig162478.3967.1|Name=mRNA_H-elongata_contig162478.3967.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MRGAFVREDFRPFAPSVLEEEAGGWFEGLPPDGSPYMSLTAPAKPGVADS
VPAVCHVDGSSRLQTVREKDNPLYHRLISAFYSLTGVPMVLNTSFNVMGE
PIVNSPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038152Carbam_trans_C_sf
IPR031730Carbam_trans_C