prot_H-elongata_contig16029.3871.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16029.3871.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI) HSP 1 Score: 394 bits (1013), Expect = 3.340e-112 Identity = 316/765 (41.31%), Postives = 388/765 (50.72%), Query Frame = 0
Query: 87 EDKLVVLGERGSSKVYTVFVEEVWEG--EGECEKESG-SLAVQVALDQLNRMSLKLLLTGGLEGPDSIRVDKRWTLDQLRDAIAAATRRDSRSFQLRM-QANGSEIRPGPETLRSQGILNIFNLHVSPGRPLERNEEAIVIAPLEVGFAAGLRASPPPSVVKALAGGRAASRFLPPPQEXXXXXXXXXXPSSASNRQGEEATAAERGALGD-----------------------------------PSGNGGGIAGERREGFFSGKQDSDFRNVDIEIGLTSTKDCAPAATLAAASFSFGLPRGYTSCAVDSSGSGGVTCSMLGEAVAAGEFCA------DAVGNIGGSGGGPATAPLSSATGAKINDYASSAS---VRPDSGPAAAEPGPHASAVWAAAXXXXXXXXKLAKAEAERLTTTAVEFPPTESSWGDQFTIAVKHDSTVADIRLAVWQEMRRRGL-------VAGPPDGSRKKAEGDRPGTEPEASLG------CSPAALRLREKRNAQPSTILHDSDGIPTRLKYPTEGTPWLLVAQALPVEENLGQPGVHVAAGSSCGGEDKKEKDLGLTAKVSWAGGRGGSCDELARFDAGDRNAAVAGVSLHIPPANAKVIVVQWWDRWEWRLTEKYEAWISPTETVAAVRKRFAEQVGVDPANIRANRCTSKTRLRLVDLRGASDANQSNSSSGCLGLGVASVESGGWNSTSSSSTMCRWGDLDASRGDYAVMTPSISEGDLVLLQDVSQPLKRLMATTEAAI 790
E ++VVLG+RGS+ + ++VEEV EG G+ ++E G SLAV+VA DQ NR+++ L LTGG+EGP + DKRWT DQLR+AIA A +RSF+LR Q N EIRPGPETL +G N+ LHVSPGRPLE +EEA+ +AP++VGF GL +P SVV A+A GR +R G A E+ +GD P G G G+ GE D R + L T AAT S G T+ +V SS +G T + G A+ A E C +AV P + P SS+ A P S P WAAAXXXXXXXX+ AKAE E LT+T VE P ES WG+QF +AV DSTV DIR AVW EMRRRGL V D ++ + DR T S G +P ALRLRE+ P+TI+ D+DG TRL+ PWLLVAQ LP EE+LG+P G GG G + GS + PP +A+VIVVQWW+RWEWRLTEKYEAW+SPTETVA+ R+R AEQ GV+PAN+ ANRC RLRL DLRG + S G G +S G S S C W DL+ASRGD V +ISEG LVLLQD SQPLK+L TEA+I
Sbjct: 1198 ESEVVVLGDRGSNIILRIYVEEVPEGGDAGDGDEEEGVSLAVKVATDQPNRITVTLDLTGGIEGPGRMSADKRWTSDQLREAIAQAIGCPNRSFRLRKCQGNTPEIRPGPETLAKKGFYNLIKLHVSPGRPLELHEEAVTVAPVDVGFRVGLGPAPT-SVVLAIAAGRVRAR------SSSADSAAVKEEGGGQQELGYGAATTEKVGVGDCRSLKFPEVDAEIGPVAICDTTTAPPSADCSPTLGPVGEGRGVVGE-----------GDNRPTVVASDLLLTLRGVGAAT--GGGDSSGGSEAPTA-SVSSSETGQTTPTNRGIALLASEECKTTPTDREAVAPFA-----PPSPPRSSSAVAXXXXXXXXXXXXXAHPGSAAVGTGASPEGGVAWAAAXXXXXXXXQDAKAETEALTSTYVEVVPPESRWGEQFNVAVHRDSTVGDIRRAVWTEMRRRGLGPRGFSAVGAAADVGNEEEKDDRLPTPGAVSTGHPLEEGWTPGALRLRERHVKLPATIVRDADGKVTRLRSRPRDAPWLLVAQVLPREEDLGRPVFPQGGGG--GGXXXXXXXXGDSGH--------GSAETXXXXXXXXXXGGADAARDDCPPQDARVIVVQWWNRWEWRLTEKYEAWVSPTETVASARRRLAEQAGVNPANLLANRCAPNARLRLFDLRGTA----SERGDGSGGSPAPEKQSSGTWGGSFSHNKCHWSDLEASRGDQPVGGSAISEGSLVLLQDSSQPLKQLAPATEASI 1922 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16029.3871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig16029.3871.1 ID=prot_H-elongata_contig16029.3871.1|Name=mRNA_H-elongata_contig16029.3871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1071bpback to top |