prot_H-elongata_contig159040.3816.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159040.3816.1
Unique Nameprot_H-elongata_contig159040.3816.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 6.980e-30
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            ++LPWWRQ GRKTFP L+PVAQQVFGNQA  +QVERDFSGC  LL  NRS +DTYWVEMVMFL
Sbjct:   29 EILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFL 91          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.070e-27
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            +VLPWW++ G+  FP L+PVAQQVFGNQA+ SQVERDFSG GILLAPNRS +DTYWVE+VMFL
Sbjct:  191 EVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFL 253          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 3.560e-26
Identity = 47/63 (74.60%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            +VLPWWR  GRK FP L+PVAQQV GNQA  +QVERDFS C  LL  NRS IDTYWVEMVMFL
Sbjct:  104 EVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 166          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 6.030e-26
Identity = 48/63 (76.19%), Postives = 51/63 (80.95%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            +VLPWWR  GRK FPCL+PVAQQV GNQA  +QVERDFS C  LL  NRS IDTYWVEMVMFL
Sbjct:  502 EVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 564          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 7.860e-21
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            +VL +W + G+  FP L  VAQQ FGNQAS + VERDFSGCG+ + PNRS +D YWVEMVMFL
Sbjct:  389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFL 451          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.080e-19
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            +VL +W   GR +FP L  VAQQ FG+Q S + VERDFSGCG+ L PNRS ++ YWVEMVMFL
Sbjct:  731 EVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFL 793          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.290e-18
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   14 FPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            FP L+PVAQQV GNQA  +QVERDFS C  LL  NRS IDTYWVEMVMFL
Sbjct:    2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 51          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 5.770e-12
Identity = 33/50 (66.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   14 FPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            F  L   A +V GNQA  +QVERDFS C  LL  NRS IDTYWVEMVMFL
Sbjct:  218 FQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFL 267          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A0P1AKL2_PLAHL (Ribonuclease H-like domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKL2_PLAHL)

HSP 1 Score: 61.6 bits (148), Expect = 2.330e-10
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            DVL  +  + +  FP L+ VA+ +FGN AS + +ERDF   G+LL P R+ +DT+ VEM++FL
Sbjct:    9 DVLDGFCIKHQGRFPHLAAVARCIFGNSASAAGIERDFEIAGVLLNPRRTNLDTFVVEMILFL 71          
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Match: A0A0P1AQK6_PLAHL (Ribonuclease H-like domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQK6_PLAHL)

HSP 1 Score: 60.1 bits (144), Expect = 5.220e-9
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    1 DVLP--WWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRSCIDTYWVEMVMFL 63
            DVL   W + +GR  FP L+ VA+  FGN A  + +ERDF   G+LL P R+ +DT+ VEM++FL
Sbjct:  232 DVLDGFWIKHQGR--FPRLAAVARYTFGNSALTAGIERDFGIAGVLLNPRRNNLDTFVVEMILFL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159040.3816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KSA7_9PHAE6.980e-3077.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZQ5_9PHAE5.070e-2776.19Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JVT2_9PHAE3.560e-2674.60Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec... [more]
A0A6H5KZ46_9PHAE6.030e-2676.19Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5K8W6_9PHAE7.860e-2163.49Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJJ9_9PHAE1.080e-1961.90Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KP16_9PHAE3.290e-1876.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KBM2_9PHAE5.770e-1266.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1AKL2_PLAHL2.330e-1046.03Ribonuclease H-like domain n=1 Tax=Plasmopara hals... [more]
A0A0P1AQK6_PLAHL5.220e-947.69Ribonuclease H-like domain n=1 Tax=Plasmopara hals... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 1..63
e-value: 1.0E-9
score: 38.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159040contigH-elongata_contig159040:205..396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159040.3816.1mRNA_H-elongata_contig159040.3816.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159040 205..396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159040.3816.1 ID=prot_H-elongata_contig159040.3816.1|Name=mRNA_H-elongata_contig159040.3816.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
DVLPWWRQRGRKTFPCLSPVAQQVFGNQASGSQVERDFSGCGILLAPNRS
CIDTYWVEMVMFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf