prot_H-elongata_contig157322.3735.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157322.3735.1
Unique Nameprot_H-elongata_contig157322.3735.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
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BLAST of mRNA_H-elongata_contig157322.3735.1 vs. uniprot
Match: D7FW89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW89_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 6.790e-24
Identity = 76/170 (44.71%), Postives = 91/170 (53.53%), Query Frame = 0 
Query:    1 MDLPRSSLLGRLEAFLPEMEKANRETEKLAEEGKLEIIDKKLEVASSDDQREQAXXXXXXXXXXXXXDGLPGA----AEGNAIPPRVVKLDFALGDFDDTPIAKMEEAKQDKEYYDARHVAADDQDRVNEGALKEAV--GSLILVPGARIESSGEASSQPKSRKPLIEEL 164
            M+LP SSLLGRLEAFLPEMEKAN++TEKLA+EGKLE++        SD Q E A             +   G     A G     R V+LDFALGDFDDTPIAKME+ K+      AR     D         +E V  G  ++VPGA        +   K  +PLIEEL
Sbjct:    1 MNLPPSSLLGRLEAFLPEMEKANQKTEKLAQEGKLEVLXXXXXXXXSDKQTEGAEGTDDEAGDSEVEEEEEGGQVEGAAGVVAAGRTVQLDFALGDFDDTPIAKMEQEKEA-----AREAGGVDAGATGGVEEEEGVEEGGDVVVPGA--------AHPKKPSQPLIEEL 157
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BLAST of mRNA_H-elongata_contig157322.3735.1 vs. uniprot
Match: A0A836CNZ4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNZ4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.590e-11
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:    1 MDLPRSSLLGRLEAFLPEMEKANRETEKLAEEGKLEIIDKKLEVASSDDQREQAXXXXXXXXXXXXXDGLPGAAEGNAIPP---RVVKLDFALGDFDDTPIAKMEE 103
            M+LP SSLLG+LEAFLP++ +ANR+ ++   EG+ E ID  L + ++D   E++                    EG        +VV+L FALGDFDDTP+A+ EE
Sbjct:    1 MELPPSSLLGKLEAFLPKLAQANRDLQQQTLEGQAETIDAHLALDAADGNDEESESSDGEGDVAVAGASARAINEGAGDMQGGGKVVQLSFALGDFDDTPVAQFEE 106
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157322.3735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW89_ECTSI6.790e-2444.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNZ4_9STRA3.590e-1140.57Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157322contigH-elongata_contig157322:188..1039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157322.3735.1mRNA_H-elongata_contig157322.3735.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157322 2..1104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157322.3735.1 ID=prot_H-elongata_contig157322.3735.1|Name=mRNA_H-elongata_contig157322.3735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MDLPRSSLLGRLEAFLPEMEKANRETEKLAEEGKLEIIDKKLEVASSDDQ
REQAEETDPEDGEEEEEDGLPGAAEGNAIPPRVVKLDFALGDFDDTPIAK
MEEAKQDKEYYDARHVAADDQDRVNEGALKEAVGSLILVPGARIESSGEA
SSQPKSRKPLIEEL*
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