prot_H-elongata_contig157312.3734.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157312.3734.1
Unique Nameprot_H-elongata_contig157312.3734.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: D7FM58_ECTSI (Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM58_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 7.590e-17
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    6 SAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            SAYGTWVSEVMLQQTRVETV++YYV+WM LFPTP  LA A LEQV
Sbjct:  176 SAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAASLEQV 220          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A7S1QR20_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QR20_ALECA)

HSP 1 Score: 72.0 bits (175), Expect = 3.280e-15
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    4 QKSAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            ++SAYGTWVSEVMLQQT+VE VVEY+ RWM LFPT  ALA A+ ++V
Sbjct:   17 ERSAYGTWVSEVMLQQTQVERVVEYWTRWMKLFPTASALAVAEGDEV 63          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A7S3M064_9STRA (Adenine DNA glycosylase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M064_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.140e-14
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    6 SAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            SAYGTW+SEVMLQQTRVETV+EY+ RWMA+FP  K LA+A  ++V
Sbjct:   67 SAYGTWISEVMLQQTRVETVIEYWNRWMAVFPDVKTLASASPDEV 111          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A1V9ZNM1_9STRA (Adenine DNA glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNM1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 9.770e-14
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    6 SAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            S Y TWVSE+M QQTRVETVVEYYV+WM  FPT +ALA AD EQV
Sbjct:   55 SPYATWVSEIMCQQTRVETVVEYYVKWMEKFPTVEALAAADPEQV 99          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A1V9ZA94_9STRA (Adenine DNA glycosylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA94_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 9.830e-14
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    6 SAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            S YGTWVSE+M QQTRVETVV+YYVRWM  FPT  ALA A+ EQV
Sbjct:   57 SPYGTWVSEIMCQQTRVETVVDYYVRWMEKFPTVHALAAAEPEQV 101          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A516AG53_LINPO (Adenine DNA glycosylase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG53_LINPO)

HSP 1 Score: 72.8 bits (177), Expect = 9.890e-14
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    6 SAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            SAYGTWVSEVMLQQT+VE VVEY+ RWM  FPT +ALA AD E V
Sbjct:  155 SAYGTWVSEVMLQQTQVERVVEYWARWMRRFPTVRALAEADAEAV 199          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A067BVX9_SAPPC (Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVX9_SAPPC)

HSP 1 Score: 71.6 bits (174), Expect = 2.450e-13
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    6 SAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            S YGTWVSE+M QQTRVETVV+YYVRWM  FPT  ALA A+ +QV
Sbjct:   57 SPYGTWVSEIMCQQTRVETVVDYYVRWMEKFPTVHALAAAEPDQV 101          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A5B8MNV0_9CHLO (Adenine DNA glycosylase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MNV0_9CHLO)

HSP 1 Score: 71.6 bits (174), Expect = 2.500e-13
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    2 DKQKSAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            DK   AY  WVSEVMLQQTRVETV +YY+RWM  +PT + LANAD+E+V
Sbjct:   86 DKSGFAYCVWVSEVMLQQTRVETVKDYYLRWMQKYPTVEDLANADIEEV 134          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: UPI001262DD77 (adenine DNA glycosylase-like isoform X2 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262DD77)

HSP 1 Score: 71.2 bits (173), Expect = 3.220e-13
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    2 DKQKSAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            DK++ AYG WVSEVMLQQTRV+TV+EYY RWM  +PT   L+ A LE+V
Sbjct:   51 DKERRAYGVWVSEVMLQQTRVQTVIEYYNRWMKKWPTIHHLSEASLEEV 99          
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Match: A0A067EIJ3_CITSI (Adenine DNA glycosylase n=6 Tax=Citrus TaxID=2706 RepID=A0A067EIJ3_CITSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.440e-13
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    2 DKQKSAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV 50
            +K+K AYG WVSEVMLQQTRV+TV++YY RWM  +PT   LA A LE+V
Sbjct:  111 EKEKRAYGVWVSEVMLQQTRVQTVIDYYNRWMTKWPTIHHLAKASLEEV 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157312.3734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM58_ECTSI7.590e-1782.22Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1QR20_ALECA3.280e-1570.21Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S3M064_9STRA8.140e-1471.11Adenine DNA glycosylase (Fragment) n=1 Tax=Spumell... [more]
A0A1V9ZNM1_9STRA9.770e-1475.56Adenine DNA glycosylase n=1 Tax=Thraustotheca clav... [more]
A0A1V9ZA94_9STRA9.830e-1475.56Adenine DNA glycosylase n=1 Tax=Achlya hypogyna Ta... [more]
A0A516AG53_LINPO9.890e-1475.56Adenine DNA glycosylase n=1 Tax=Lingulodinium poly... [more]
A0A067BVX9_SAPPC2.450e-1373.33Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=... [more]
A0A5B8MNV0_9CHLO2.500e-1367.35Adenine DNA glycosylase n=1 Tax=Chloropicon primus... [more]
UPI001262DD773.220e-1365.31adenine DNA glycosylase-like isoform X2 n=1 Tax=Pi... [more]
A0A067EIJ3_CITSI3.440e-1365.31Adenine DNA glycosylase n=6 Tax=Citrus TaxID=2706 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 12..49
e-value: 1.4E-7
score: 31.9
NoneNo IPR availableGENE3D1.10.340.30coord: 1..50
e-value: 5.7E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR42944FAMILY NOT NAMEDcoord: 2..50
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 5..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157312contigH-elongata_contig157312:318..467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157312.3734.1mRNA_H-elongata_contig157312.3734.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157312 318..467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157312.3734.1 ID=prot_H-elongata_contig157312.3734.1|Name=mRNA_H-elongata_contig157312.3734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MDKQKSAYGTWVSEVMLQQTRVETVVEYYVRWMALFPTPKALANADLEQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003265HhH-GPD_domain
IPR011257DNA_glycosylase