prot_H-elongata_contig156173.3666.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig156173.3666.1
Unique Nameprot_H-elongata_contig156173.3666.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length162
Homology
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 4.200e-69
Identity = 117/158 (74.05%), Postives = 131/158 (82.91%), Query Frame = 0
Query:   19 RYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSR-----------------GELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHLLPKV 159
            +YP DFAFDPSDEDEGEEDMLRQQLRKHLVNA+R APE VL+F+CRALSSLPTPLS LPFPDLEAALRLIFHFGEGCGG++ LNS                   ELLRSG FPQMV+ALH+SDVA+HKHPQV++LYFQLTVRY K+LA+GP HL+PKV
Sbjct:  419 KYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXPAAPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKV 576          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.940e-44
Identity = 83/141 (58.87%), Postives = 100/141 (70.92%), Query Frame = 0
Query:   19 RYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHLLPKV 159
            ++P+DF FD  DE++GEE+ LR  LRK LVN  R APELVL F C ALS+LP+PLSALP+P  EAALRL++HF EGC       +   LL  G FPQMV ALH SD+A+H HPQVLILYF + VRY K+L  G + L P V
Sbjct:  427 QFPADFEFDAEDEEDGEEEALRGALRKVLVNTCRAAPELVLRFACEALSALPSPLSALPWPAAEAALRLLYHFSEGCASAAAAANAQALLHEGAFPQMVAALHRSDIARHPHPQVLILYFDIAVRYVKVLRGGGAELTPLV 567          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A7S4M7Y7_9STRA (Exportin-T (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7Y7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.290e-30
Identity = 68/138 (49.28%), Postives = 90/138 (65.22%), Query Frame = 0
Query:   19 RYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSS-LPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHL 155
            RYP DFAFDP DEDE EE++ R +LRK   +AVR  P+  ++FL   LSS L  PLS+ P PD+EAALRL++H  EG     G  +   L + G F  M+I LH+SDV+ H H +VL+LY+ ++VRY  LL + P  L
Sbjct:  161 RYPPDFAFDPEDEDEAEEEVYRSKLRKLHRDAVRSRPDESMEFLSSTLSSRLSAPLSSAPMPDVEAALRLVYHHCEGVRPPPGART---LAKDGRFRSMLIGLHDSDVSSHPHGEVLMLYYDVSVRYHPLLRDRPDLL 295          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A448ZS68_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS68_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.510e-26
Identity = 62/141 (43.97%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   19 RYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHLLPKV 159
            RYP DF +D  D+DE EE+M R +LRK     VR  P+L L F C+ LS LP PLS  P P++E A+ L++ + EG     G+     ++R+ TF  +++ LH SD+ +H H ++LILY++ +VRY  LL E  S LL KV
Sbjct:  441 RYPPDFQYDFEDDDEAEEEMYRTELRKLNKKFVRANPDLCLQFTCQILSQLPLPLSTAPTPNVEVAISLVYQYCEGIRPPPGMKV---VMRNETFCNLLVGLHTSDITEHPHREILILYYETSVRYYPLLKER-SDLLQKV 577          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: B8C3C8_THAPS (Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C8_THAPS)

HSP 1 Score: 113 bits (283), Expect = 3.880e-26
Identity = 67/156 (42.95%), Postives = 86/156 (55.13%), Query Frame = 0
Query:    1 FPSSTSLLRPKSSQSRLSRYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHLL 156
             PS   L R  S      +YPS F F        EE++ R  LRK     VR  P++VL F+  +LSSLP PLS +   D+E ALRL+ H+GEG     G  +    LR   F +MV ALH SDV+ H H +VL+LY+ L+VRY  LL + P  LL
Sbjct:  594 IPSDRLLQRVLSILQERMKYPSSFDFXXXXXXXAEEEVYRTHLRKLYQRIVRFKPQMVLHFMAASLSSLPQPLSMVSTSDMEVALRLVHHYGEGRRPAPGAKTA---LRDAQFREMVTALHRSDVSSHPHREVLLLYYDLSVRYASLLKDSPPELL 746          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: K0SEF1_THAOC (Exportin-T n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEF1_THAOC)

HSP 1 Score: 106 bits (264), Expect = 1.370e-23
Identity = 61/137 (44.53%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   20 YPSDFAFDPSDEDEGEEDMLRQQLRKHL-VNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHL 155
            YPSDF FD  DE+E  E+M R QLRK L V  VR     V  F+  +LS+LP PLS     D+E ALRL++H+ EG     G  ++  L +  +F +++IALH+SDV  H H +VL+LY+ + VRY  +L + P  L
Sbjct:  471 YPSDFRFDYEDEEEXXEEMYRAQLRKQLFVRIVRLRKTAVEAFMGVSLSALPQPLSRAQTSDIEVALRLVYHYAEGRRPPPG--AKTALKQDVSFREIIIALHQSDVTGHPHREVLLLYYDIAVRYATVLKDSPDLL 605          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A7S0A169_9STRA (Exportin-T (Fragment) n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A169_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.640e-23
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 0
Query:   19 RYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAP-ELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGE----LLRSGTFPQMVIALHE-SDVAQHKHPQVLILYFQLTVRYGKLLAEGPSHLLPKV 159
            +YPSDF FD +D+DE +E   R  LRK  +  VR  P +L + FLC+  ++LP PLS  P   LEA+LRL+FHF EG    T  +S+      + +   F  +V+AL+  SD+ +H H ++ +LYF + VRY  L  + P  LLP +
Sbjct:  486 KYPSDFQFDYNDDDEADEQAFRFNLRKLYIQMVRTYPIDLTIRFLCQVFANLPMPLSTCPIMSLEASLRLLFHFSEGIRPSTYKSSKSASAYLMNKIDAFHDLVVALYSNSDLVEHSHDEITLLYFDVAVRYLDLFKKHPE-LLPNL 631          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A7S1D0W2_CYCTE (Exportin-T (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0W2_CYCTE)

HSP 1 Score: 95.9 bits (237), Expect = 2.350e-22
Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = 0
Query:   16 RLSRYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGL 101
            R SRYP+DF FD  DEDE EE++ R ++RK     VR A EL L FLC AL SLP PLS  P PD+EAA+RL++H+GEG     GL
Sbjct:   46 RQSRYPADFQFDHEDEDEAEEELYRSEMRKLYRKLVRVAAELCLQFLCEALGSLPMPLSTAPTPDIEAAVRLVYHYGEGVRPPPGL 131          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A7S2DJX0_9STRA (Exportin-T (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJX0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.310e-21
Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   32 DEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPS 153
            +E EE++ R ++R+  +  +R  PEL L+F+C  LS L  PLS L +P  EAALRL++HFGEG G          L +SG FP ++ A+H+SD+  H H  V  LY +L+VRY K L   P 
Sbjct:  138 EEAEEEVHRGRIRRLFLKCIRVVPELSLEFVCSMLSELQPPLSDLRWPRAEAALRLVYHFGEGLGP-----KNQTLCQSGAFPTVLAAVHQSDIGMHPHWCVKTLYLELSVRYVKRLEGQPE 254          
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Match: A0A7S2DK11_9STRA (Exportin-T n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DK11_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.310e-21
Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   32 DEGEEDMLRQQLRKHLVNAVRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTGLNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAEGPS 153
            +E EE++ R ++R+  +  +R  PEL L+F+C  LS L  PLS L +P  EAALRL++HFGEG G          L +SG FP ++ A+H+SD+  H H  V  LY +L+VRY K L   P 
Sbjct:  138 EEAEEEVHRGRIRRLFLKCIRVVPELSLEFVCSMLSELQPPLSDLRWPRAEAALRLVYHFGEGLGP-----KNQTLCQSGAFPTVLAAVHQSDIGMHPHWCVKTLYLELSVRYVKRLEGQPE 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156173.3666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT8_ECTSI4.200e-6974.05Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CAL0_9STRA1.940e-4458.87Exportin-T n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S4M7Y7_9STRA8.290e-3049.28Exportin-T (Fragment) n=1 Tax=Odontella aurita Tax... [more]
A0A448ZS68_9STRA1.510e-2643.97Exportin-T n=1 Tax=Pseudo-nitzschia multistriata T... [more]
B8C3C8_THAPS3.880e-2642.95Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=... [more]
K0SEF1_THAOC1.370e-2344.53Exportin-T n=1 Tax=Thalassiosira oceanica TaxID=15... [more]
A0A7S0A169_9STRA4.640e-2340.82Exportin-T (Fragment) n=1 Tax=Rhizosolenia setiger... [more]
A0A7S1D0W2_CYCTE2.350e-2256.98Exportin-T (Fragment) n=1 Tax=Cyclophora tenuis Ta... [more]
A0A7S2DJX0_9STRA5.310e-2143.44Exportin-T (Fragment) n=1 Tax=Dictyocha speculum T... [more]
A0A7S2DK11_9STRA6.310e-2143.44Exportin-T n=1 Tax=Dictyocha speculum TaxID=35687 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 13..160
e-value: 2.0E-22
score: 80.7
IPR040017Exportin-TPANTHERPTHR15952EXPORTIN-T/LOS1coord: 19..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig156173contigH-elongata_contig156173:76..1020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig156173.3666.1mRNA_H-elongata_contig156173.3666.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig156173 76..1020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig156173.3666.1 ID=prot_H-elongata_contig156173.3666.1|Name=mRNA_H-elongata_contig156173.3666.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
FPSSTSLLRPKSSQSRLSRYPSDFAFDPSDEDEGEEDMLRQQLRKHLVNA
VRQAPELVLDFLCRALSSLPTPLSALPFPDLEAALRLIFHFGEGCGGMTG
LNSRGELLRSGTFPQMVIALHESDVAQHKHPQVLILYFQLTVRYGKLLAE
GPSHLLPKVRP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR040017XPOT