prot_H-elongata_contig15609.3662.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15609.3662.1
Unique Nameprot_H-elongata_contig15609.3662.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length454
Homology
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 655 bits (1691), Expect = 9.990e-231
Identity = 350/453 (77.26%), Postives = 378/453 (83.44%), Query Frame = 0
Query:    1 RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQEEXXXXXXDGDYAPGAQEGSDAESSSESDVDGGDSDSATPKTSKRSGTGIKSKKEPKKRMKASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKRAEV 453
            +TLFDLN+K++SQCVMPGVKKSNDVELQLHESDATDQ EDTLVAIRVTLPEKD+DT+E SPAE+LQM VMERANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYS FMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATI VNMS+EDLQ+KY+ NLNSEM GPLHNLIAKIFKVL++KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+SGND +MLQLG+LDDHDPYKAALD+DQ E     X                           D A   + KR GTG   K   +K                  KKDK+APKGA S++MQFSQA RA+V
Sbjct:  119 KTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQV 571          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 597 bits (1538), Expect = 4.210e-210
Identity = 338/497 (68.01%), Postives = 370/497 (74.45%), Query Frame = 0
Query:    1 RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAK----IFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQEEXXXXXXDGDYAPGAQEGSDAESSSESDVDGG------------------------DSDSATPKTSKRS-GTGIKSKKEPKKRM---------------KASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKRAEV 453
            RTLFDLN+K++SQCVMPGVKKSNDVELQLHESDATDQ EDTLVAIRVTLPEKD+DT+E SPAE+LQM VMERANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYS FMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMS+EDLQ+KY+ NLNSEM GPLHNL+AK    IFKVL+ KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+ GND +MLQLG+LDDHDPYKAALD+D+ E      D DYAP A+ GSDA                                   DSD    KTSK+  GTG   K   +K++               +AS   SSKP  KKR KKDK+APKGA S++MQFSQA RA+ 
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQA 470          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 362 bits (928), Expect = 7.910e-116
Identity = 187/307 (60.91%), Postives = 228/307 (74.27%), Query Frame = 0
Query:   40 DTLVAIRVTLPEKDDDTE--------------EPSP---AETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGN 328
            D LV +R+ LP++ +D +              +  P   AET    VM+RANI DVKG VL E + S GTF  PRGRY++EMYS F+RMHG++YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NMS  +LQ+KY G L   M G L NLIAKIFK L+ + V+VTG + S  GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE+ESVEFQRY G Q    V R+FDLCV  +S++GE +K Y FSGIDR+EY SLY +  TK LRIKNIK SG+
Sbjct:  102 DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGD 408          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 358 bits (920), Expect = 3.350e-115
Identity = 179/331 (54.08%), Postives = 241/331 (72.81%), Query Frame = 0
Query:    3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGND 329
            +  + + E+SQCV+PG  + N++ELQ HESD  +   D LVAIR  +P   +    D + P+ AE     +M+ A I +  G V+VEF+E++GTF  PRGRY IE+Y  F+RM G +YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN+  ++L+++Y G L   M G L NLIAK FK++A K V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE++SVEFQRY G QG+  TRNFDLCV   S AG+  K Y+FSGIDR++YTSLY+FLS KK++IKNI++S  D
Sbjct:  151 MMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKID 478          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA)

HSP 1 Score: 347 bits (890), Expect = 3.510e-114
Identity = 174/310 (56.13%), Postives = 230/310 (74.19%), Query Frame = 0
Query:   23 NDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAP-KSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 327
            N++E+Q HESDA +   D LVA+R  +P   D    + + P+PAE  Q  +M+ ANI    G V+VE  E +GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+  E L+++YNG+L   M G L NL+AK FK++A K V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+  TRNFDLCV+   S A   TK Y+FSGIDR++YT LY+FLS KK++IKN++  G
Sbjct:    4 NEIEMQFHESDAVEAGTDQLVAVRFYIPPDPDADPSEQDAPTPAELFQQRIMKNANIKRTTGDVIVEIPEEKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLLNSGADAGTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGGG 311          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.070e-113
Identity = 181/326 (55.52%), Postives = 243/326 (74.54%), Query Frame = 0
Query:    3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIK 324
            +   N+KEISQCV+PG  + N++E+Q HESDA +   D LVAIR  +P   D    + +  +PAE  Q  +M+ ANI    G V+VE  E++GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+  E L+++YNG+L   M G L NL+AK FK++A K V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+  TRNFDLCV+  +    +TK Y+FSGIDR++YT LY+FLS KK++IKN++
Sbjct:  153 MMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQ 475          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.560e-113
Identity = 182/330 (55.15%), Postives = 243/330 (73.64%), Query Frame = 0
Query:    3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 327
            +  L + E+SQCV+PG  + N++ELQ HESD  +   D LV +R+ +P   D    D +  +PAE LQ  +M+ ANI +  G V+VEF+ES+GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN+  E LQ +Y G+L   M G L NL+AK FKV+A K V++ GKF++ N    VKCAL ANEGHLYPL K F+FIHKP  ++ FDE+ESVEFQRY G QG+  TRNFDLCV   + +G+T +K YVFSGIDR++YT LY+FLS KK++I N +  G
Sbjct:  161 MMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVG 487          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S1C2J2_9STRA (FACT complex subunit SSRP1 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2J2_9STRA)

HSP 1 Score: 342 bits (876), Expect = 2.250e-107
Identity = 179/356 (50.28%), Postives = 247/356 (69.38%), Query Frame = 0
Query:    3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET--TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSML--QLGNLDDHDPYKAALDE 350
            +  L++ E+SQCV+PG  + ND+ELQ HESDA +   D LV +R  +P   D    D + P+ AE  Q  +M +A I +    V+V+F+E++G+F  PRGRY++E+Y  ++RMHG +YDYKI Y DIS+LFLL + +E+  AFV++LDKPIRQGQQ+YQ+LVL+TT  ++ + +N+  E L ++YNG+L  ++ G L NL+AK FKV+  K V+V GKF++  G   VKCAL ANEG LYPL K F+FIHKP+ ++ FDEIESVEFQRY G QG+  TRNFDLCV   ++ GE+  +K YVFSGIDR +Y +LYSFLS KK+RI NI  +G +      +    DD+D    A D+
Sbjct:  147 ILSLDLTEVSQCVLPGNNR-NDIELQFHESDAGEVGTDQLVQLRFYVPPDPDADQADRDVPTAAELFQKSIMTQARIKNSSMNVIVQFDENRGSFLTPRGRYAMELYDSYLRMHGNKYDYKINYADISRLFLLPRQEEQNKAFVIALDKPIRQGQQRYQYLVLQTTTAQSEVTINLDQETLDREYNGDLQPQVRGSLCNLVAKCFKVITRKKVFVPGKFTNAYGQSFVKCALRANEGSLYPLEKQFVFIHKPSVLVRFDEIESVEFQRYAGGQGS--TRNFDLCVRLLNITGESGGSKEYVFSGIDRTDYNTLYSFLSGKKIRIANIADNGMESGQASARAAMYDDNDTRNDAGDD 499          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 341 bits (875), Expect = 4.770e-107
Identity = 180/330 (54.55%), Postives = 239/330 (72.42%), Query Frame = 0
Query:    3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLP-----EKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ 325
            +  L++ E+SQCV+PG  + N+VELQ  ESDA +   D LV++R+ +P     +  D T + S AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y RF RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   + VN+  + L+++Y  +L   M G L NL+AK FKV+A K V++ GKFS+ N    VKCAL ANEG LYPL K FIFIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV  K+ A   +  + YVFSGIDR++YT LY+FLSTK +RIKN+++
Sbjct:  100 MMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTS-AELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQE 425          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 343 bits (880), Expect = 8.920e-107
Identity = 179/329 (54.41%), Postives = 237/329 (72.04%), Query Frame = 0
Query:    3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ 325
            +  L++ E+SQCV+PG  + N+VELQ  ESDA +   D LV+IR  +P   +    D    S AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y RF RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   I VN+  + L+++Y  +L   M G L NL+AK FKV+A K V++ GKFS+ N    VKCAL ANEG LYPL K F+FIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV+ K+ A   +  + YVFSG+DR++YT LY+FLSTK +RIKN+++
Sbjct:  155 MMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQE 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI9.990e-23177.26FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE4.210e-21068.01FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA7.910e-11660.91FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S2SJ65_9STRA3.350e-11554.08FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7R9VM85_9STRA3.510e-11456.13FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseu... [more]
A0A7S4HR37_9STRA1.070e-11355.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3RIK7_9STRA1.560e-11355.15Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1C2J2_9STRA2.250e-10750.28FACT complex subunit SSRP1 n=1 Tax=Corethron hystr... [more]
A0A1E7FQX7_9STRA4.770e-10754.55FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
A0A7S0TAB4_9STRA8.920e-10754.41FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 204..217
score: 33.04
coord: 117..133
score: 52.21
coord: 95..111
score: 45.59
coord: 140..156
score: 61.76
coord: 231..249
score: 55.26
coord: 249..266
score: 52.78
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 223..323
e-value: 4.0E-33
score: 126.1
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 225..322
e-value: 3.9E-23
score: 81.7
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 1..51
e-value: 1.0E-9
score: 38.1
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 214..321
e-value: 2.0E-33
score: 116.5
NoneNo IPR availableGENE3D2.30.29.150coord: 73..213
e-value: 1.8E-48
score: 165.7
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 2..430
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 2..430
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 92..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15609contigH-elongata_contig15609:177..5153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15609.3662.1mRNA_H-elongata_contig15609.3662.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15609 177..5153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15609.3662.1 ID=prot_H-elongata_contig15609.3662.1|Name=mRNA_H-elongata_contig15609.3662.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bp
RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLP
EKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRY
SIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIR
QGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIA
KIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKP
TCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSG
IDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDE
DQEEDEESEDDGDYAPGAQEGSDAESSSESDVDGGDSDSATPKTSKRSGT
GIKSKKEPKKRMKASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKR
AEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR013719DUF1747
IPR024954SSRP1_dom
IPR011993PH-like_dom_sf