prot_H-elongata_contig15609.3662.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI) HSP 1 Score: 655 bits (1691), Expect = 9.990e-231 Identity = 350/453 (77.26%), Postives = 378/453 (83.44%), Query Frame = 0
Query: 1 RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQEEXXXXXXDGDYAPGAQEGSDAESSSESDVDGGDSDSATPKTSKRSGTGIKSKKEPKKRMKASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKRAEV 453
+TLFDLN+K++SQCVMPGVKKSNDVELQLHESDATDQ EDTLVAIRVTLPEKD+DT+E SPAE+LQM VMERANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYS FMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATI VNMS+EDLQ+KY+ NLNSEM GPLHNLIAKIFKVL++KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+SGND +MLQLG+LDDHDPYKAALD+DQ E X D A + KR GTG K +K KKDK+APKGA S++MQFSQA RA+V
Sbjct: 119 KTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQV 571
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE) HSP 1 Score: 597 bits (1538), Expect = 4.210e-210 Identity = 338/497 (68.01%), Postives = 370/497 (74.45%), Query Frame = 0
Query: 1 RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAK----IFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQEEXXXXXXDGDYAPGAQEGSDAESSSESDVDGG------------------------DSDSATPKTSKRS-GTGIKSKKEPKKRM---------------KASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKRAEV 453
RTLFDLN+K++SQCVMPGVKKSNDVELQLHESDATDQ EDTLVAIRVTLPEKD+DT+E SPAE+LQM VMERANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYS FMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMS+EDLQ+KY+ NLNSEM GPLHNL+AK IFKVL+ KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNK GAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+ GND +MLQLG+LDDHDPYKAALD+D+ E D DYAP A+ GSDA DSD KTSK+ GTG K +K++ +AS SSKP KKR KKDK+APKGA S++MQFSQA RA+
Sbjct: 3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQA 470
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA) HSP 1 Score: 362 bits (928), Expect = 7.910e-116 Identity = 187/307 (60.91%), Postives = 228/307 (74.27%), Query Frame = 0
Query: 40 DTLVAIRVTLPEKDDDTE--------------EPSP---AETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGN 328
D LV +R+ LP++ +D + + P AET VM+RANI DVKG VL E + S GTF PRGRY++EMYS F+RMHG++YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NMS +LQ+KY G L M G L NLIAKIFK L+ + V+VTG + S GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE+ESVEFQRY G Q V R+FDLCV +S++GE +K Y FSGIDR+EY SLY + TK LRIKNIK SG+
Sbjct: 102 DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGD 408
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA) HSP 1 Score: 358 bits (920), Expect = 3.350e-115 Identity = 179/331 (54.08%), Postives = 241/331 (72.81%), Query Frame = 0
Query: 3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGND 329
+ + + E+SQCV+PG + N++ELQ HESD + D LVAIR +P + D + P+ AE +M+ A I + G V+VEF+E++GTF PRGRY IE+Y F+RM G +YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN+ ++L+++Y G L M G L NLIAK FK++A K V++ GKF + VKCAL ANEGHLYPL KSF+FIHKP +I FDE++SVEFQRY G QG+ TRNFDLCV S AG+ K Y+FSGIDR++YTSLY+FLS KK++IKNI++S D
Sbjct: 151 MMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKID 478
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA) HSP 1 Score: 347 bits (890), Expect = 3.510e-114 Identity = 174/310 (56.13%), Postives = 230/310 (74.19%), Query Frame = 0
Query: 23 NDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAP-KSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 327
N++E+Q HESDA + D LVA+R +P D + + P+PAE Q +M+ ANI G V+VE E +GTF PRGRY+IE+Y F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+ E L+++YNG+L M G L NL+AK FK++A K V++ GKF++ N VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+ TRNFDLCV+ S A TK Y+FSGIDR++YT LY+FLS KK++IKN++ G
Sbjct: 4 NEIEMQFHESDAVEAGTDQLVAVRFYIPPDPDADPSEQDAPTPAELFQQRIMKNANIKRTTGDVIVEIPEEKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLLNSGADAGTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGGG 311
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA) HSP 1 Score: 364 bits (935), Expect = 1.070e-113 Identity = 181/326 (55.52%), Postives = 243/326 (74.54%), Query Frame = 0
Query: 3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIK 324
+ N+KEISQCV+PG + N++E+Q HESDA + D LVAIR +P D + + +PAE Q +M+ ANI G V+VE E++GTF PRGRY+IE+Y F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+ E L+++YNG+L M G L NL+AK FK++A K V++ GKF++ N VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+ TRNFDLCV+ + +TK Y+FSGIDR++YT LY+FLS KK++IKN++
Sbjct: 153 MMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQ 475
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA) HSP 1 Score: 364 bits (935), Expect = 1.560e-113 Identity = 182/330 (55.15%), Postives = 243/330 (73.64%), Query Frame = 0
Query: 3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 327
+ L + E+SQCV+PG + N++ELQ HESD + D LV +R+ +P D D + +PAE LQ +M+ ANI + G V+VEF+ES+GTF PRGRY+IE+Y F+RM G +YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN+ E LQ +Y G+L M G L NL+AK FKV+A K V++ GKF++ N VKCAL ANEGHLYPL K F+FIHKP ++ FDE+ESVEFQRY G QG+ TRNFDLCV + +G+T +K YVFSGIDR++YT LY+FLS KK++I N + G
Sbjct: 161 MMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVG 487
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S1C2J2_9STRA (FACT complex subunit SSRP1 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2J2_9STRA) HSP 1 Score: 342 bits (876), Expect = 2.250e-107 Identity = 179/356 (50.28%), Postives = 247/356 (69.38%), Query Frame = 0
Query: 3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET--TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSML--QLGNLDDHDPYKAALDE 350
+ L++ E+SQCV+PG + ND+ELQ HESDA + D LV +R +P D D + P+ AE Q +M +A I + V+V+F+E++G+F PRGRY++E+Y ++RMHG +YDYKI Y DIS+LFLL + +E+ AFV++LDKPIRQGQQ+YQ+LVL+TT ++ + +N+ E L ++YNG+L ++ G L NL+AK FKV+ K V+V GKF++ G VKCAL ANEG LYPL K F+FIHKP+ ++ FDEIESVEFQRY G QG+ TRNFDLCV ++ GE+ +K YVFSGIDR +Y +LYSFLS KK+RI NI +G + + DD+D A D+
Sbjct: 147 ILSLDLTEVSQCVLPGNNR-NDIELQFHESDAGEVGTDQLVQLRFYVPPDPDADQADRDVPTAAELFQKSIMTQARIKNSSMNVIVQFDENRGSFLTPRGRYAMELYDSYLRMHGNKYDYKINYADISRLFLLPRQEEQNKAFVIALDKPIRQGQQRYQYLVLQTTTAQSEVTINLDQETLDREYNGDLQPQVRGSLCNLVAKCFKVITRKKVFVPGKFTNAYGQSFVKCALRANEGSLYPLEKQFVFIHKPSVLVRFDEIESVEFQRYAGGQGS--TRNFDLCVRLLNITGESGGSKEYVFSGIDRTDYNTLYSFLSGKKIRIANIADNGMESGQASARAAMYDDNDTRNDAGDD 499
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA) HSP 1 Score: 341 bits (875), Expect = 4.770e-107 Identity = 180/330 (54.55%), Postives = 239/330 (72.42%), Query Frame = 0
Query: 3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLP-----EKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ 325
+ L++ E+SQCV+PG + N+VELQ ESDA + D LV++R+ +P + D T + S AE LQ +M+ ANI G V+VEF+ +G+F PRGRYSIE+Y RF RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD + VN+ + L+++Y +L M G L NL+AK FKV+A K V++ GKFS+ N VKCAL ANEG LYPL K FIFIHKP +I F+E+ESVEFQRY G QG+ TRNFDLCV K+ A + + YVFSGIDR++YT LY+FLSTK +RIKN+++
Sbjct: 100 MMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTS-AELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQE 425
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA) HSP 1 Score: 343 bits (880), Expect = 8.920e-107 Identity = 179/329 (54.41%), Postives = 237/329 (72.04%), Query Frame = 0
Query: 3 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ 325
+ L++ E+SQCV+PG + N+VELQ ESDA + D LV+IR +P + D S AE LQ +M+ ANI G V+VEF+ +G+F PRGRYSIE+Y RF RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD I VN+ + L+++Y +L M G L NL+AK FKV+A K V++ GKFS+ N VKCAL ANEG LYPL K F+FIHKP +I F+E+ESVEFQRY G QG+ TRNFDLCV+ K+ A + + YVFSG+DR++YT LY+FLSTK +RIKN+++
Sbjct: 155 MMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQE 480 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig15609.3662.1 ID=prot_H-elongata_contig15609.3662.1|Name=mRNA_H-elongata_contig15609.3662.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bpback to top |