prot_H-elongata_contig154752.3598.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154752.3598.1
Unique Nameprot_H-elongata_contig154752.3598.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A0U1WNP6_SARFS (NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxID=3009 RepID=A0A0U1WNP6_SARFS)

HSP 1 Score: 104 bits (260), Expect = 3.310e-25
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT YVLAVE LLQ+SIP+R+QYIR LFAEITRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   79 MMCQEHT-YVLAVEKLLQVSIPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWSF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: NDUS2_PYLLI (NADH-ubiquinone oxidoreductase 49 kDa subunit n=72 Tax=Phaeophyceae TaxID=2870 RepID=NDUS2_PYLLI)

HSP 1 Score: 102 bits (255), Expect = 1.720e-24
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT Y L+VE LLQ+SIPRR+Q+IR LFAEITRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   79 MMCQEHT-YALSVENLLQVSIPRRAQFIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWAF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: Q2TU97_DICDH (NADH dehydrogenase subunit 7 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU97_DICDH)

HSP 1 Score: 102 bits (255), Expect = 1.720e-24
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT Y LAVE LL +SIPRR+QYIR +FAEITRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   79 MMCQEHT-YALAVENLLNVSIPRRAQYIRVIFAEITRILNHLLAVGCHAMDVGAMTPFLWAF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A4D6E538_9PHAE (NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E538_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.720e-24
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT Y LAVE LLQIS+P+R+QYIR LFAEITRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   79 MMCQEHT-YSLAVENLLQISVPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWSF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A4Y5T7J7_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7J7_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.620e-23
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT Y L VE LLQ++IP+R+QYIR +FAEITRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   79 MMCQEHT-YSLGVEKLLQVNIPKRAQYIRVIFAEITRILNHLLAVGCHAMDVGAMTPFLWSF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A8F0K0U0_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0U0_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.240e-22
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT + LAVE LLQ  IP+R+QYIR LFAEITRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   79 MMCQEHT-FALAVEKLLQSGIPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWGF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A8E8PDP1_9PHAE (Nad7 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PDP1_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 8.880e-22
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC+EHT +VLA+E LL++ +P R QYIR LFAE+TRILNHLLAVGCHAMDVGAM+PF   F
Sbjct:   79 MMCQEHT-FVLAIEKLLKVEVPVRGQYIRVLFAELTRILNHLLAVGCHAMDVGAMSPFLWAF 139          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A0D2MC54_9CHLO (NADH dehydrogenase (Ubiquinone) Fe-Sprotein 2 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MC54_9CHLO)

HSP 1 Score: 92.8 bits (229), Expect = 1.130e-21
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MMC EH+ YVLAVE LL +S+P R+QYIR LF+EITRI+NHLLAV CHAMDVGA+TPF   F
Sbjct:  135 MMCMEHS-YVLAVEQLLNVSVPARAQYIRVLFSEITRIMNHLLAVTCHAMDVGALTPFLWAF 195          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: D2JPA0_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Ulnaria acus TaxID=1436140 RepID=D2JPA0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.230e-21
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            MM +EH+ Y LA+E LLQ+ IP+R+QYIR LFAE+TRILNHLLAVGCHAMDVGAMTPF   F
Sbjct:   80 MMSQEHS-YCLAIEKLLQVQIPQRAQYIRVLFAELTRILNHLLAVGCHAMDVGAMTPFLWAF 140          
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A0G3F4I5_PSEMU (NADH dehydrogenase subunit 7 n=19 Tax=Eukaryota TaxID=2759 RepID=A0A0G3F4I5_PSEMU)

HSP 1 Score: 92.8 bits (229), Expect = 8.580e-21
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMDVGAMTPFFMVF 62
            M+C+EHT Y LAVE L+   +P+R+QYIR LFAEITRILNHLLAVGCHAMDVGAMTP    F
Sbjct:   78 MLCQEHT-YCLAVENLVHCKVPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPMLWGF 138          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U1WNP6_SARFS3.310e-2583.87NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxI... [more]
NDUS2_PYLLI1.720e-2480.65NADH-ubiquinone oxidoreductase 49 kDa subunit n=72... [more]
Q2TU97_DICDH1.720e-2480.65NADH dehydrogenase subunit 7 n=1 Tax=Dictyota dich... [more]
A0A4D6E538_9PHAE1.720e-2482.26NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae... [more]
A0A4Y5T7J7_9PHAE4.620e-2377.42NADH dehydrogenase subunit 7 n=1 Tax=Dictyopteris ... [more]
A0A8F0K0U0_9PHAE1.240e-2279.03NADH dehydrogenase subunit 7 n=1 Tax=Analipus japo... [more]
A0A8E8PDP1_9PHAE8.880e-2272.58Nad7 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=... [more]
A0A0D2MC54_9CHLO1.130e-2172.58NADH dehydrogenase (Ubiquinone) Fe-Sprotein 2 n=1 ... [more]
D2JPA0_9STRA1.230e-2174.19NADH dehydrogenase subunit 7 n=1 Tax=Ulnaria acus ... [more]
A0A0G3F4I5_PSEMU8.580e-2172.58NADH dehydrogenase subunit 7 n=19 Tax=Eukaryota Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038290NADH-quinone oxidoreductase, subunit D superfamilyGENE3D1.10.645.20coord: 1..62
e-value: 9.2E-19
score: 69.3
NoneNo IPR availablePANTHERPTHR11993NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNITcoord: 1..62
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
IPR029014[NiFe]-hydrogenase, large subunitSUPERFAMILY56762HydB/Nqo4-likecoord: 6..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154752contigH-elongata_contig154752:203..391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154752.3598.1mRNA_H-elongata_contig154752.3598.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154752 2..1171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154752.3598.1 ID=prot_H-elongata_contig154752.3598.1|Name=mRNA_H-elongata_contig154752.3598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAM
DVGAMTPFFMVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038290NADH_Q_OxRdtase_suD_sf
IPR029014NiFe-Hase_large