mRNA_H-elongata_contig154752.3598.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A0U1WNP6_SARFS (NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxID=3009 RepID=A0A0U1WNP6_SARFS) HSP 1 Score: 444 bits (1141), Expect = 4.840e-152 Identity = 213/253 (84.19%), Postives = 234/253 (92.49%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLWSFEERE LMEFYERVSGARMHASY RPGGVS D+ +G++D IYAFVGQFGQRLDEMEEMLT NRIWQERLVDIG+VTA++A+NWGF GVMLRGSGVRWDLR+NE YE+YS+L FKGVVG TGDCY RYLAR+EEMRQSLSIIHQC+NNMP+GS+KVDD K+ PPSR E+KQ+ ESLIHHFKLYTEGVSV GETY+ATEAPKGEFGV LVSDGSNRPY RCKIKAPGFSHLQGLNFM+KSHMLADVVT+I
Sbjct: 135 FLWSFEEREKLMEFYERVSGARMHASYFRPGGVSLDMGLGLLDDIYAFVGQFGQRLDEMEEMLTDNRIWQERLVDIGVVTAEDAVNWGFSGVMLRGSGVRWDLRKNEPYEIYSDLRFKGVVGKTGDCYDRYLARIEEMRQSLSIIHQCINNMPRGSVKVDDTKICPPSRCEMKQNMESLIHHFKLYTEGVSVPFGETYTATEAPKGEFGVYLVSDGSNRPY-RCKIKAPGFSHLQGLNFMAKSHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: NDUS2_PYLLI (NADH-ubiquinone oxidoreductase 49 kDa subunit n=72 Tax=Phaeophyceae TaxID=2870 RepID=NDUS2_PYLLI) HSP 1 Score: 437 bits (1124), Expect = 1.840e-149 Identity = 212/253 (83.79%), Postives = 236/253 (93.28%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW+FEERE LMEFYERVSGARMHASY RPGGVS+DISVG++D I+AFV QFGQRLDE+EEMLT NRIWQERLVDIG+V+AQEAI+WGF GVMLRGSG+RWDLR+NE YE+YS+L+F+GVVG TGDCY RYLARVEEMRQSLSII+QCLN MP+GS+K+DDAK+SPPSRSEVKQS ESLIHHFKLYTEGV V AGETY+ATEAPKGEFGV LVS GS+RPY RCKIKAPGFSHLQGLNFM+ SHMLADVVT+I
Sbjct: 135 FLWAFEEREKLMEFYERVSGARMHASYFRPGGVSQDISVGLVDDIFAFVAQFGQRLDEIEEMLTDNRIWQERLVDIGVVSAQEAIDWGFSGVMLRGSGIRWDLRKNEPYEIYSDLNFQGVVGKTGDCYDRYLARVEEMRQSLSIIYQCLNKMPRGSVKIDDAKISPPSRSEVKQSMESLIHHFKLYTEGVFVPAGETYTATEAPKGEFGVYLVSKGSSRPY-RCKIKAPGFSHLQGLNFMACSHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A8F0K0U0_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0U0_9PHAE) HSP 1 Score: 426 bits (1096), Expect = 3.250e-145 Identity = 209/253 (82.61%), Postives = 229/253 (90.51%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW FEERE LMEFYERVSGARMHASY RPGGVS+DIS+G+I+ IYAF QFGQRLDEMEEMLT NRIWQERLVDIG VTAQ+AINWGF GVMLRGSGV WDLR+NE YE YSEL+F+ VG TGDCY RYL R+EEMRQSLS+I+QCLNNMP+GSIK +DAK+SPPSR+EVKQ+ ESLIHHFKLYTEGV V AGETY+ATEAPKGEFGV LVSDGS RPY RCKIKAPGF+HLQGLNFM+KSHMLADVVT+I
Sbjct: 135 FLWGFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGLIEDIYAFGAQFGQRLDEMEEMLTDNRIWQERLVDIGRVTAQQAINWGFSGVMLRGSGVLWDLRKNEPYETYSELNFQAAVGKTGDCYDRYLVRIEEMRQSLSLIYQCLNNMPRGSIKSEDAKISPPSRTEVKQNMESLIHHFKLYTEGVVVPAGETYTATEAPKGEFGVYLVSDGSPRPY-RCKIKAPGFAHLQGLNFMTKSHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A4D6E538_9PHAE (NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E538_9PHAE) HSP 1 Score: 424 bits (1090), Expect = 2.640e-144 Identity = 203/253 (80.24%), Postives = 232/253 (91.70%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLWSFEERE LMEFYERVSGARMHASY RPGGVS+DI++G+I+ I++F QFGQRLDE+EEMLT NRIWQERLVDIG+V++QEAI+WGF GVMLRGSGVRWDLR+NE Y+ YSEL F+GVVG GDCY RYL R++EMRQSLSII+QCLN +P+GSIKVDD+K++PPSR++VKQS ESLIHHFKLYTEGV+V +GETY+ATEAPKGEFGV LVSDGSNRPY RCKIKAPGFSHLQ LNFMS SHMLADVVT+I
Sbjct: 135 FLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDITIGLIEDIFSFSAQFGQRLDEVEEMLTDNRIWQERLVDIGVVSSQEAIDWGFSGVMLRGSGVRWDLRKNEPYDAYSELSFQGVVGKMGDCYDRYLVRIDEMRQSLSIIYQCLNKIPEGSIKVDDSKITPPSRADVKQSMESLIHHFKLYTEGVTVPSGETYTATEAPKGEFGVYLVSDGSNRPY-RCKIKAPGFSHLQALNFMSNSHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A7S6UA25_9STRA (Nad7 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA25_9STRA) HSP 1 Score: 399 bits (1024), Expect = 2.660e-134 Identity = 190/253 (75.10%), Postives = 222/253 (87.75%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW FEERE LMEFYERVSGARMHA+YIRPGG+S+DIS+G++D IY F QF RLDEMEEMLT NRIW++RLVDIG V+A EA++WGF GVMLRGSG+ WDLR+++ YEVY +LDF +G GDCY RYL RVEEMRQSL II+QCLN MP+GS+K+DDAK+SPP+RS++KQS ESLIHHFKLY+EGV V AGETY+ATEAPKGEFGV L+S+GSNRPY RCKIKAPGF HLQ L+FMSKSHM+ADVVT+I
Sbjct: 135 FLWGFEEREKLMEFYERVSGARMHAAYIRPGGLSQDISLGLLDDIYLFANQFATRLDEMEEMLTANRIWKQRLVDIGRVSAAEALDWGFSGVMLRGSGISWDLRKHQPYEVYEKLDFHIPIGTNGDCYDRYLLRVEEMRQSLGIIYQCLNQMPKGSVKIDDAKISPPTRSQMKQSMESLIHHFKLYSEGVLVPAGETYTATEAPKGEFGVYLISNGSNRPY-RCKIKAPGFGHLQALDFMSKSHMVADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A4Y5T7J7_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7J7_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 4.980e-132 Identity = 187/253 (73.91%), Postives = 220/253 (86.96%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLWSFEERE LMEFYERVSGARMHASY RPGGVS+D+S+G+++ I++F QFGQRLDE+EEMLT N IW+ RLVDIG+VTA++A++WGF GVMLRGSG+ WDLR+N+ YE+Y + F VG GDC+ RY RV+EMRQSLSI+HQCLNN+P GSIKVDDAK+SPPSR++VKQS E+LIHHFKLYTEG V GETY+ATEAPKGEFGV L+S+G+NRPY RCKIKAPGF HLQ LNFMS SHMLADVVT+I
Sbjct: 135 FLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDLSLGLLNDIHSFCDQFGQRLDEVEEMLTSNPIWKLRLVDIGVVTAKQAVDWGFSGVMLRGSGILWDLRKNQPYEIYPGIKFDVPVGIHGDCFDRYTVRVQEMRQSLSIVHQCLNNIPVGSIKVDDAKISPPSRADVKQSMEALIHHFKLYTEGTLVPVGETYTATEAPKGEFGVYLISNGTNRPY-RCKIKAPGFGHLQALNFMSNSHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: Q2TU97_DICDH (NADH dehydrogenase subunit 7 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU97_DICDH) HSP 1 Score: 388 bits (997), Expect = 3.270e-130 Identity = 186/253 (73.52%), Postives = 218/253 (86.17%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW+FEERE LMEFYERVSGARMHASY RPGGVS+D+S+GI++ IY+F QFG RLDE+EEMLT N IW+ RLVDIG+VTA+EA++WGF GVMLRGSG+ WDLR+N+ YEVY E+ F VG GDC+ RY R++EMRQSL+I++QCLN MPQGS+KVDD K+SPPSR E+KQ+ E+LIHHFKLYTEGV V GETY ATEAPKGEFGV L+S+G+NRPY RCKIKAPGFSHLQ LN MS SHMLADVVT+I
Sbjct: 135 FLWAFEEREKLMEFYERVSGARMHASYFRPGGVSQDLSLGILNDIYSFCNQFGHRLDEIEEMLTSNPIWKLRLVDIGVVTAREAVDWGFSGVMLRGSGLIWDLRKNQPYEVYPEIKFDIPVGVNGDCFDRYTIRIQEMRQSLNILYQCLNKMPQGSVKVDDYKISPPSRVELKQNMEALIHHFKLYTEGVLVPVGETYIATEAPKGEFGVYLISNGTNRPY-RCKIKAPGFSHLQALNLMSSSHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: F1DPM6_COCSC (NADH dehydrogenase subunit 7 n=4 Tax=Trebouxiophyceae TaxID=75966 RepID=F1DPM6_COCSC) HSP 1 Score: 383 bits (983), Expect = 4.310e-128 Identity = 180/253 (71.15%), Postives = 218/253 (86.17%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW FEERE LMEFYERVSGARMHA+YIRPGGV++D+ +G+ + IY F QF R+DEMEEMLT NRIW++RLVD+G+VTA +A++WGF GVMLRGSG+ WDLR+ + Y+VYS++DF+ VG GDCY RYL RVEEMRQSL +I QCL MPQG IK DD K++PPSRS++KQS ESLIHHFKLYTEG +V AGETY+A EAPKGEFGV LVS+G+NRPY RCKI+APGF+HLQGL+FM+++HMLADVVT+I
Sbjct: 135 FLWGFEEREKLMEFYERVSGARMHAAYIRPGGVAQDLPIGLSEDIYRFARQFASRIDEMEEMLTNNRIWKQRLVDVGVVTADQALDWGFSGVMLRGSGIGWDLRKTQPYDVYSKMDFQVPVGSRGDCYDRYLIRVEEMRQSLRMIMQCLQEMPQGLIKSDDRKITPPSRSQMKQSMESLIHHFKLYTEGFAVPAGETYTAVEAPKGEFGVFLVSNGTNRPY-RCKIRAPGFAHLQGLDFMARNHMLADVVTII 386
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: NDUS2_RECAM (NADH-ubiquinone oxidoreductase 49 kDa subunit n=1 Tax=Reclinomonas americana TaxID=48483 RepID=NDUS2_RECAM) HSP 1 Score: 380 bits (977), Expect = 3.260e-127 Identity = 182/253 (71.94%), Postives = 214/253 (84.58%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW FEERE LMEFYERVSGARMHA+YIRPGGVS+D+ +G+ + IY F QFG R+DE+E++L+ NRIW++RLVDIG V+A+EA++WGF GVMLRGSG+ WDLR+ + Y+VY EL+F VG GDCY RYL RVEEMRQSL +I QCLN MP G IKVDD K+SPPSR ++K S E+LIHHFKLYTEG SV GETY+A EAPKGEFGV LVSDGS++PY RCKIKAPGFSHLQGLNFMSK HM+ADVVT+I
Sbjct: 133 FLWGFEEREKLMEFYERVSGARMHAAYIRPGGVSQDMPMGLSEDIYKFAKQFGSRIDEIEDVLSSNRIWKQRLVDIGTVSAEEALDWGFSGVMLRGSGIAWDLRKTQPYDVYDELEFDIPVGTKGDCYDRYLIRVEEMRQSLKLIMQCLNKMPTGVIKVDDKKISPPSRVDMKDSMEALIHHFKLYTEGYSVPIGETYTAVEAPKGEFGVYLVSDGSSKPY-RCKIKAPGFSHLQGLNFMSKGHMIADVVTII 384
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Match: A0A1S5R1X0_9CHLO (NADH dehydrogenase subunit 7 n=1 Tax=Cymbomonas tetramitiformis TaxID=36881 RepID=A0A1S5R1X0_9CHLO) HSP 1 Score: 380 bits (977), Expect = 3.490e-127 Identity = 183/253 (72.33%), Postives = 214/253 (84.58%), Query Frame = 2
Query: 374 FLWSFEERENLMEFYERVSGARMHASYIRPGGVSRDISVGIIDYIYAFVGQFGQRLDEMEEMLTYNRIWQERLVDIGIVTAQEAINWGF*GVMLRGSGVRWDLRENEHYEVYSELDFKGVVG*TGDCYYRYLARVEEMRQSLSIIHQCLNNMPQGSIKVDDAKVSPPSRSEVKQSKESLIHHFKLYTEGVSVGAGETYSATEAPKGEFGVCLVSDGSNRPYVRCKIKAPGFSHLQGLNFMSKSHMLADVVTVI 1132
FLW+FEERE LMEFYERVSGARMHA+YIRPGGVS+DI VG++ IY F QF R+DE+EEMLT NRIW++RLV+IGIV+ +EA+NWGF GVMLRGSG+ WDLR ++ YEVY +++F VG GDCY RYL RVEEMRQSL II QCLNNMP+G IK DD KV+PPSR+++K S ESLIHHFK Y+EG SV GETYSA EAPKGEFGV LVS+G+NRPY RCKI+APGF HLQ L+FMSK+HMLADVVT+I
Sbjct: 135 FLWAFEEREKLMEFYERVSGARMHAAYIRPGGVSQDIPVGLLKDIYTFTEQFASRIDELEEMLTNNRIWKQRLVNIGIVSGEEALNWGFSGVMLRGSGISWDLRRSQPYEVYDQMNFDIPVGLRGDCYDRYLCRVEEMRQSLRIISQCLNNMPEGLIKTDDRKVTPPSRTQMKTSMESLIHHFKYYSEGFSVPIGETYSAIEAPKGEFGVYLVSNGTNRPY-RCKIRAPGFVHLQALDFMSKNHMLADVVTII 386 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154752.3598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig154752.3598.1 >prot_H-elongata_contig154752.3598.1 ID=prot_H-elongata_contig154752.3598.1|Name=mRNA_H-elongata_contig154752.3598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp MMCEEHTTYVLAVETLLQISIPRRSQYIRGLFAEITRILNHLLAVGCHAMback to top mRNA from alignment at H-elongata_contig154752:2..1171+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig154752.3598.1 ID=mRNA_H-elongata_contig154752.3598.1|Name=mRNA_H-elongata_contig154752.3598.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1170bp|location=Sequence derived from alignment at H-elongata_contig154752:2..1171+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig154752:2..1171+ >mRNA_H-elongata_contig154752.3598.1 ID=mRNA_H-elongata_contig154752.3598.1|Name=mRNA_H-elongata_contig154752.3598.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig154752:2..1171+ (Himanthalia elongata Himel1 dioecious)back to top |