prot_H-elongata_contig15416.3570.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15416.3570.1
Unique Nameprot_H-elongata_contig15416.3570.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
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BLAST of mRNA_H-elongata_contig15416.3570.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.730e-8
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:    1 MGGVHLSDQYNAVHAFMHRAVNYFWRRVFEQKLAQPVTSGWLMYQAWLTTL 51
            MGGV ++DQ    HA  HR + +FWRRVF+QK AQ V++GWL++  W   L
Sbjct:  272 MGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSNGWLLFYEWAGVL 322
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15416.3570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQZ5_9PHAE1.730e-850.98DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15416contigH-elongata_contig15416:7071..7453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15416.3570.1mRNA_H-elongata_contig15416.3570.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15416 7007..7509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15416.3570.1 ID=prot_H-elongata_contig15416.3570.1|Name=mRNA_H-elongata_contig15416.3570.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MGGVHLSDQYNAVHAFMHRAVNYFWRRVFEQKLAQPVTSGWLMYQAWLTT
LDWEEVIIFREDMDTVRLELEAAGDGIDLQDVEGVIRRPLAQCIEGSLDG
RPVLPPHVILSGGRSRPAAG*
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