prot_H-elongata_contig154122.3569.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6A3YME3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YME3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.740e-8 Identity = 65/293 (22.18%), Postives = 117/293 (39.93%), Query Frame = 0
Query: 3 LEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKGGDRRHRPKFNRK----------CFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGST-LPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
+ ++ + A DAW LE +R + L + + + ++E+ L + R + E C ++ L YE + + AD+ ++L+ ++ KD + + + GKG ++ K N++ CF+CGK GHYAR+C+ S D + + A G E W DSGA+ HM R S Y ++ A S L V G+G + + V H+ +++N ++ +++NL S+ E
Sbjct: 1 MHVIDAATA-KDAWAKLENFHRTQDMANRLWLKEKF-ASFKYTASSIKDHVMELETLVLKM-RNANCGPNEEDVCATMLRSLPASYESLVQAFRMSTTTFSLADL-------VSKLIAEEVRQKDSTHIEEVTALLAGKGNGKQQNSKKNQRGGRKKGPAGACFTCGKKGHYARDCKMDSHSRGADQDQ-----SNVAFNATEGFASESWVMDSGASAHMCKSRGAFSEYTAVKNGRSVLSAKTSADLKVLGYGTVTLRV-WTGHSWINARLENTLHVQDLNKNLFSLTAVTE 277
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: UPI00098DE827 (uncharacterized protein LOC109826924 n=3 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DE827) HSP 1 Score: 62.4 bits (150), Expect = 2.250e-7 Identity = 73/314 (23.25%), Postives = 135/314 (42.99%), Query Frame = 0
Query: 4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGK-GGDRRHRPKFNRKCFSCGKGGHYARNCRA-------SGESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
E V R + + W+ L+ + K + + +E+ N K + EF I++ L ++N L ++S+ E + I+ GL +Y E E ++ + + A + +V + + + +Q S G++ N G+ G + +F KC+ CGK H+ ++CR + G T++++ G K V AA G +W DSG + H+ S+ ++ I AD S V+ G + ++ D S T + NV ++PG+ +NLLS++ AV+
Sbjct: 79 EHVSRCTSASAIWQALDQLFNKKNEARLQLLENELANAK--QGWSSISEFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLVSQESLAMQMAGV-KVHDDSGSAFVAGRQQSFRAKPKYGNVKNNDGREGSSTGDKKRF--KCYWCGKLRHFKKDCRVKLKETNMAESKGHTEDKEWG---KCFTVEAASSGTSTAKNLGNDWIVDSGCSHHITGDEKLFSSLQRHDGKEAIITADNSIHRVEKEGTVIIEGDDGSPIT----LKNVYHVPGVRKNLLSVVNAVD 380
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6A3JYB2_9STRA (CCHC-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JYB2_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.130e-7 Identity = 72/276 (26.09%), Postives = 119/276 (43.12%), Query Frame = 0
Query: 15 AWRNL-ETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSAS------KGHITVNRGK---GGDRRHRPKFNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMD-VDQPSHTTKRVKMDNVAYMPGISRNLLSI 279
AW L + +YR + H K ME G + L L LG+ + E ++ VI+++ LST+YE+ C I+EN+ + +++ + ++ RL +++ + + + KG T GK G R F KCF+CG+ GH R+C D G +D+ A HM R + YK + + IADG + V G G + + +D R++M +V Y+PG++R LLS+
Sbjct: 59 AWNTLCDFYYRTTMHNRVTMTRHLHEFK-MEDGXXXXXXXDKFNELIVGLQTLGEP-LDEARQLVILLTNLSTEYELICSIVENS-MDFMLVEVKEKLLKEFERLDKKEGTERALKVTANGSKIKGAKTFKGGKDSKGYSVRKHGGFKGKCFNCGQMGHMKRDC--------PDPNTG---------------------NDNDAA-HMTPRRNDLFEYKDLDSNVEVAIADGMEVLVVGTGSVCLTGIDG-----NRIEMIDVLYIPGLNRQLLSV 296
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A4Y2E814_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2E814_ARAVE) HSP 1 Score: 62.4 bits (150), Expect = 3.280e-7 Identity = 79/301 (26.25%), Postives = 128/301 (42.52%), Query Frame = 0
Query: 3 LEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNP---VGLDRADIERVVGNQY---------NRLLRQQQDSKDMSASKGHITVN--RGKGGDRRHRPKFNR----KCFSCGKGGHYARNC---RASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGST-LPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILK 281
L +Q+ + W+ L + Y AKG+ + + + + EI +L DL R+ V +I I+ L +YE LEN P + LD +R++ ++ ++ D+ +A + N KG H KF R KCFSCGK GHY R+C + + +SGA + I AA ++++ DSGAT HM + S+ + AS I+ A S L V+G G I ++ + + +V Y+P ++ LLS+ K
Sbjct: 68 LSSLQKEDTAFKIWKALISTYEAKGAVNQILTRKRLATIRKSKETSMRQHIDEILKLVSDL-RVSGSEVSDIDSIAYILMSLPKEYESVKVALENQPNVNLTLDFVITQRLIDSEALMNDSKFVDKSSIKYPTDNVTFAAKYKKLISNFCSKKG----HTSKFCRLKTSKCFSCGKAGHYKRDCPVSKTAADSGARHSAY-------EITFAAGTLNEDKFIIDSGATSHMCSRKEWFSSLEPASG--IIKCASKSAVLQVEGIGIIRGEISN----NVNLNLKDVLYVPNLNGQLLSVQK 350
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A0J7N4R7_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7N4R7_LASNI) HSP 1 Score: 60.1 bits (144), Expect = 1.200e-6 Identity = 66/285 (23.16%), Postives = 130/285 (45.61%), Query Frame = 0
Query: 6 VQRSNAPNDAWRNLETHYRAKG-SREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITV---NRGKGGDRRHRPKFNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEE--WESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
+Q + P W N+ + +G +R++ + + K+ E E++ +I A L +G ++ E +++SGL +Y+ EN+ + + D +V +LL++ + K++ + N+G G +R K +KCF+CGK GH+A C+A + + R + + T + A G + +E W DS A+ HM + + + + ++ A+ L G + + V T+ V ++ + Y+P ++ NLLS+ K E
Sbjct: 70 IQETITPKATWDNIVETFEDRGLTRKVGLLKSLTSAKLTECKSVE-EYVNKITNAAHQLKEIGI-TIEEEMIGALLLSGLPNEYKPMIIGFENSGIAIT-GDTIKV------KLLQEIKSVKEIKTETEETALYSKNKGYG----NRDKIVKKCFTCGKTGHFAAKCKAKIKQKRNEERS---TQQKTFLTLATGEQMKETGWYLDSCASTHMTRRKDWLKDVRTYNA--SVLAANNQKLKALKKGTVTISVTN-GRDTENVAVEEILYVPELAANLLSVSKITE 335
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6D2KMT4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT4_9BRAS) HSP 1 Score: 60.5 bits (145), Expect = 1.290e-6 Identity = 76/316 (24.05%), Postives = 134/316 (42.41%), Query Frame = 0
Query: 4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKG----GDRRHRPKFNRKCFSCGKGGHYARNCRAS------GESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
E V R + + W+ L+ + K + + +E+ N K E EF I++ L ++N L ++S+ E + I+ GL +Y E E + + A ++ + + R+QQ K + + G + N G+ GD++ +F KC+ CGK GH+ ++CR ES + + G C V AA G +W DSG + H+ S+ ++ I AD S V+ G I ++ ++ T + NV ++PG+ +NLLS++ AV+
Sbjct: 82 EHVSRCTSASSIWQALDQLFNKKNEARLQLLENELANAKQGESSIS--EFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLASQESLATQMAGVKIHDDSGSAFVARRQQSYKGKTKNDG-VKNNDGRERSSTGDKK---QF--KCYRCGKLGHFKKDCRVKLKETNMAESKSHTEDEDWGKC--FTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIEGEEGGPIT----LKNVYHVPGVKKNLLSVVNAVD 383
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6D2KKQ4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KKQ4_9BRAS) HSP 1 Score: 60.5 bits (145), Expect = 1.300e-6 Identity = 76/316 (24.05%), Postives = 134/316 (42.41%), Query Frame = 0
Query: 4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKG----GDRRHRPKFNRKCFSCGKGGHYARNCRAS------GESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
E V R + + W+ L+ + K + + +E+ N K E EF I++ L ++N L ++S+ E + I+ GL +Y E E + + A ++ + + R+QQ K + + G + N G+ GD++ +F KC+ CGK GH+ ++CR ES + + G C V AA G +W DSG + H+ S+ ++ I AD S V+ G I ++ ++ T + NV ++PG+ +NLLS++ AV+
Sbjct: 82 EHVSRCTSASSIWQALDQLFNKKNEARLQLLENELANAKQGESSIS--EFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLASQESLATQMAGVKIHDDSGSAFVARRQQSYKGKTKNDG-VKNNDGRERSSTGDKK---QF--KCYRCGKLGHFKKDCRVKLKETNMAESKSHTEDEDWGKC--FTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIEGEEGGPIT----LKNVYHVPGVKKNLLSVVNAVD 383
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6A3L6P0_9STRA (CCHC-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3L6P0_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.390e-6 Identity = 66/247 (26.72%), Postives = 110/247 (44.53%), Query Frame = 0
Query: 43 MEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSAS------KGHITVNRGK---GGDRRHRPKFNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMD-VDQPSHTTKRVKMDNVAYMPGISRNLLSI 279
ME G + + + L L LG+ + E ++ VI+++ LST+YE+ C I+EN+ + +++ + ++ RL +++ + + + KG T GK G R F KCF+CG+ GH R+C D G +D+ A HM R + YK + + IADG + V G G + + +D R+KM +V Y+PG+ R LLS+
Sbjct: 88 MEDGVTMAKHLDKFNELIVGLQTLGEP-LDEARQLVILLTNLSTEYELICSIVENS-MDFMLIEVKEKLLKEFERLDKKEGTERALKVTANGSKIKGAKTFKGGKDSKGYSVRKHGGFKGKCFNCGQMGHMKRDC--------PDPNTG---------------------NDNDAA-HMTPRRNDLFEYKDLDSNVEVIIADGKEVLVVGTGSVCLTGIDG-----NRIKMIDVLYIPGLDRQLLSV 297
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6D2KB33_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB33_9BRAS) HSP 1 Score: 60.5 bits (145), Expect = 1.410e-6 Identity = 76/316 (24.05%), Postives = 134/316 (42.41%), Query Frame = 0
Query: 4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKG----GDRRHRPKFNRKCFSCGKGGHYARNCRAS------GESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
E V R + + W+ L+ + K + + +E+ N K E EF I++ L ++N L ++S+ E + I+ GL +Y E E + + A ++ + + R+QQ K + + G + N G+ GD++ +F KC+ CGK GH+ ++CR ES + + G C V AA G +W DSG + H+ S+ ++ I AD S V+ G I ++ ++ T + NV ++PG+ +NLLS++ AV+
Sbjct: 82 EHVSRCTSASSIWQALDQLFNKKNEARLQLLENELANAKQGESSIS--EFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLASQESLATQMAGVKIHDDSGSAFVARRQQSYKGKTKNDG-VKNNDGRERSSTGDKK---QF--KCYRCGKLGHFKKDCRVKLKETNMAESKSHTEDEDWGKC--FTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIEGEEGGPIT----LKNVYHVPGVKKNLLSVVNAVD 383
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A1R3K8M3_COCAP (Integrase, catalytic core n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3K8M3_COCAP) HSP 1 Score: 60.5 bits (145), Expect = 1.420e-6 Identity = 79/345 (22.90%), Postives = 143/345 (41.45%), Query Frame = 0
Query: 3 LEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVI-EIKKCVIIVSGLSTDY------------EMECRILEN---NPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKGG------------------DRRHRPKFNRKCFSCGKGGHYARNCRASGESG--ATDNRKGGGSCKS------------TIVRAACGGRKEE---------------WESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
L ++ + P +AW L T K ++ ++ +E+ I + E+ ++ L +++++L ++ I E + II+ GL +Y E LEN N LD+ + + + L ++ + + +S+ RG+ G ++RHR + N KC+SCGK GH+AR+CR G AT +R G S + + AC +E+ W DSG + HM + +S + + A+ S LP+ G+ V P +V++DNV ++ G+ +NLLS+ + +
Sbjct: 79 LHHIKDARTPREAWDTLTTLLAKKNDAKLQQLENELLS-ISQQNISVSEYFSKVKLLCNEISKLDPENAITETRMRRIIIHGLRPEYHGIVTATRGWEKEPTLTELENILVNQETLDKQISKVSIKDDEKALFIKKGVANEGESSRSRQNWRRGQRGRRPQRGGAQPVRDKDDNEEKRHR-RQNDKCYSCGKVGHFARDCRFKQAQGNAATTSRGGIDSEEDWDFQVSFAVEEPEELATACTVEQEQETALSTVSKINFNNDWLVDSGCSNHMTGDKEKLSNTSTYAGKRMVVTANNSKLPITHIGKT---VIVPKSGQHQVQLDNVFHVSGMKKNLLSVAQLTD 418 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig154122.3569.1 ID=prot_H-elongata_contig154122.3569.1|Name=mRNA_H-elongata_contig154122.3569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bpback to top |