prot_H-elongata_contig154122.3569.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154122.3569.1
Unique Nameprot_H-elongata_contig154122.3569.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length285
Homology
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6A3YME3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YME3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.740e-8
Identity = 65/293 (22.18%), Postives = 117/293 (39.93%), Query Frame = 0
Query:    3 LEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKGGDRRHRPKFNRK----------CFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGST-LPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            + ++  + A  DAW  LE  +R +     L +  +             + ++E+  L   + R  +    E   C  ++  L   YE   +    +      AD+        ++L+ ++   KD +  +    +  GKG  ++   K N++          CF+CGK GHYAR+C+    S   D  +      +    A  G   E W  DSGA+ HM   R   S Y       ++  A  S  L V G+G + + V    H+    +++N  ++  +++NL S+    E
Sbjct:    1 MHVIDAATA-KDAWAKLENFHRTQDMANRLWLKEKF-ASFKYTASSIKDHVMELETLVLKM-RNANCGPNEEDVCATMLRSLPASYESLVQAFRMSTTTFSLADL-------VSKLIAEEVRQKDSTHIEEVTALLAGKGNGKQQNSKKNQRGGRKKGPAGACFTCGKKGHYARDCKMDSHSRGADQDQ-----SNVAFNATEGFASESWVMDSGASAHMCKSRGAFSEYTAVKNGRSVLSAKTSADLKVLGYGTVTLRV-WTGHSWINARLENTLHVQDLNKNLFSLTAVTE 277          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: UPI00098DE827 (uncharacterized protein LOC109826924 n=3 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DE827)

HSP 1 Score: 62.4 bits (150), Expect = 2.250e-7
Identity = 73/314 (23.25%), Postives = 135/314 (42.99%), Query Frame = 0
Query:    4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGK-GGDRRHRPKFNRKCFSCGKGGHYARNCRA-------SGESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            E V R  + +  W+ L+  +  K    +  + +E+ N K  +      EF I++  L  ++N L  ++S+ E +    I+ GL  +Y                 E E  ++    + +  A + +V  +  +  +  +Q S       G++  N G+ G     + +F  KC+ CGK  H+ ++CR        +   G T++++ G   K   V AA  G         +W  DSG + H+       S+ ++      I  AD S   V+  G + ++ D  S  T    + NV ++PG+ +NLLS++ AV+
Sbjct:   79 EHVSRCTSASAIWQALDQLFNKKNEARLQLLENELANAK--QGWSSISEFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLVSQESLAMQMAGV-KVHDDSGSAFVAGRQQSFRAKPKYGNVKNNDGREGSSTGDKKRF--KCYWCGKLRHFKKDCRVKLKETNMAESKGHTEDKEWG---KCFTVEAASSGTSTAKNLGNDWIVDSGCSHHITGDEKLFSSLQRHDGKEAIITADNSIHRVEKEGTVIIEGDDGSPIT----LKNVYHVPGVRKNLLSVVNAVD 380          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6A3JYB2_9STRA (CCHC-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JYB2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.130e-7
Identity = 72/276 (26.09%), Postives = 119/276 (43.12%), Query Frame = 0
Query:   15 AWRNL-ETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSAS------KGHITVNRGK---GGDRRHRPKFNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMD-VDQPSHTTKRVKMDNVAYMPGISRNLLSI 279
            AW  L + +YR      +    H    K ME G        +   L   L  LG+  + E ++ VI+++ LST+YE+ C I+EN+ +     +++  +  ++ RL +++   + +  +      KG  T   GK   G   R    F  KCF+CG+ GH  R+C         D   G                     +D+ A  HM   R  +  YK     + + IADG  + V G G + +  +D       R++M +V Y+PG++R LLS+
Sbjct:   59 AWNTLCDFYYRTTMHNRVTMTRHLHEFK-MEDGXXXXXXXDKFNELIVGLQTLGEP-LDEARQLVILLTNLSTEYELICSIVENS-MDFMLVEVKEKLLKEFERLDKKEGTERALKVTANGSKIKGAKTFKGGKDSKGYSVRKHGGFKGKCFNCGQMGHMKRDC--------PDPNTG---------------------NDNDAA-HMTPRRNDLFEYKDLDSNVEVAIADGMEVLVVGTGSVCLTGIDG-----NRIEMIDVLYIPGLNRQLLSV 296          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A4Y2E814_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2E814_ARAVE)

HSP 1 Score: 62.4 bits (150), Expect = 3.280e-7
Identity = 79/301 (26.25%), Postives = 128/301 (42.52%), Query Frame = 0
Query:    3 LEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNP---VGLDRADIERVVGNQY---------NRLLRQQQDSKDMSASKGHITVN--RGKGGDRRHRPKFNR----KCFSCGKGGHYARNC---RASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGST-LPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILK 281
            L  +Q+ +     W+ L + Y AKG+   +     +            + + EI +L  DL R+    V +I     I+  L  +YE     LEN P   + LD    +R++ ++             ++   D+   +A    +  N    KG    H  KF R    KCFSCGK GHY R+C   + + +SGA  +          I  AA    ++++  DSGAT HM   +   S+ + AS    I+ A  S  L V+G G I  ++         + + +V Y+P ++  LLS+ K
Sbjct:   68 LSSLQKEDTAFKIWKALISTYEAKGAVNQILTRKRLATIRKSKETSMRQHIDEILKLVSDL-RVSGSEVSDIDSIAYILMSLPKEYESVKVALENQPNVNLTLDFVITQRLIDSEALMNDSKFVDKSSIKYPTDNVTFAAKYKKLISNFCSKKG----HTSKFCRLKTSKCFSCGKAGHYKRDCPVSKTAADSGARHSAY-------EITFAAGTLNEDKFIIDSGATSHMCSRKEWFSSLEPASG--IIKCASKSAVLQVEGIGIIRGEISN----NVNLNLKDVLYVPNLNGQLLSVQK 350          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A0J7N4R7_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7N4R7_LASNI)

HSP 1 Score: 60.1 bits (144), Expect = 1.200e-6
Identity = 66/285 (23.16%), Postives = 130/285 (45.61%), Query Frame = 0
Query:    6 VQRSNAPNDAWRNLETHYRAKG-SREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITV---NRGKGGDRRHRPKFNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEE--WESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            +Q +  P   W N+   +  +G +R++  +    + K+ E      E++ +I   A  L  +G  ++ E     +++SGL  +Y+      EN+ + +   D  +V      +LL++ +  K++        +   N+G G    +R K  +KCF+CGK GH+A  C+A  +    + R    + + T +  A G + +E  W  DS A+ HM   +  +   +  +   ++  A+   L     G + + V      T+ V ++ + Y+P ++ NLLS+ K  E
Sbjct:   70 IQETITPKATWDNIVETFEDRGLTRKVGLLKSLTSAKLTECKSVE-EYVNKITNAAHQLKEIGI-TIEEEMIGALLLSGLPNEYKPMIIGFENSGIAIT-GDTIKV------KLLQEIKSVKEIKTETEETALYSKNKGYG----NRDKIVKKCFTCGKTGHFAAKCKAKIKQKRNEERS---TQQKTFLTLATGEQMKETGWYLDSCASTHMTRRKDWLKDVRTYNA--SVLAANNQKLKALKKGTVTISVTN-GRDTENVAVEEILYVPELAANLLSVSKITE 335          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6D2KMT4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT4_9BRAS)

HSP 1 Score: 60.5 bits (145), Expect = 1.290e-6
Identity = 76/316 (24.05%), Postives = 134/316 (42.41%), Query Frame = 0
Query:    4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKG----GDRRHRPKFNRKCFSCGKGGHYARNCRAS------GESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            E V R  + +  W+ L+  +  K    +  + +E+ N K  E      EF I++  L  ++N L  ++S+ E +    I+ GL  +Y                 E E  +     +    A ++    +    + R+QQ  K  + + G +  N G+     GD++   +F  KC+ CGK GH+ ++CR         ES +    +  G C    V AA  G         +W  DSG + H+       S+ ++      I  AD S   V+  G I ++ ++    T    + NV ++PG+ +NLLS++ AV+
Sbjct:   82 EHVSRCTSASSIWQALDQLFNKKNEARLQLLENELANAKQGESSIS--EFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLASQESLATQMAGVKIHDDSGSAFVARRQQSYKGKTKNDG-VKNNDGRERSSTGDKK---QF--KCYRCGKLGHFKKDCRVKLKETNMAESKSHTEDEDWGKC--FTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIEGEEGGPIT----LKNVYHVPGVKKNLLSVVNAVD 383          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6D2KKQ4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KKQ4_9BRAS)

HSP 1 Score: 60.5 bits (145), Expect = 1.300e-6
Identity = 76/316 (24.05%), Postives = 134/316 (42.41%), Query Frame = 0
Query:    4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKG----GDRRHRPKFNRKCFSCGKGGHYARNCRAS------GESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            E V R  + +  W+ L+  +  K    +  + +E+ N K  E      EF I++  L  ++N L  ++S+ E +    I+ GL  +Y                 E E  +     +    A ++    +    + R+QQ  K  + + G +  N G+     GD++   +F  KC+ CGK GH+ ++CR         ES +    +  G C    V AA  G         +W  DSG + H+       S+ ++      I  AD S   V+  G I ++ ++    T    + NV ++PG+ +NLLS++ AV+
Sbjct:   82 EHVSRCTSASSIWQALDQLFNKKNEARLQLLENELANAKQGESSIS--EFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLASQESLATQMAGVKIHDDSGSAFVARRQQSYKGKTKNDG-VKNNDGRERSSTGDKK---QF--KCYRCGKLGHFKKDCRVKLKETNMAESKSHTEDEDWGKC--FTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIEGEEGGPIT----LKNVYHVPGVKKNLLSVVNAVD 383          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6A3L6P0_9STRA (CCHC-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3L6P0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.390e-6
Identity = 66/247 (26.72%), Postives = 110/247 (44.53%), Query Frame = 0
Query:   43 MEPGGDRFEFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSAS------KGHITVNRGK---GGDRRHRPKFNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKEEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMD-VDQPSHTTKRVKMDNVAYMPGISRNLLSI 279
            ME G    + + +   L   L  LG+  + E ++ VI+++ LST+YE+ C I+EN+ +     +++  +  ++ RL +++   + +  +      KG  T   GK   G   R    F  KCF+CG+ GH  R+C         D   G                     +D+ A  HM   R  +  YK     + + IADG  + V G G + +  +D       R+KM +V Y+PG+ R LLS+
Sbjct:   88 MEDGVTMAKHLDKFNELIVGLQTLGEP-LDEARQLVILLTNLSTEYELICSIVENS-MDFMLIEVKEKLLKEFERLDKKEGTERALKVTANGSKIKGAKTFKGGKDSKGYSVRKHGGFKGKCFNCGQMGHMKRDC--------PDPNTG---------------------NDNDAA-HMTPRRNDLFEYKDLDSNVEVIIADGKEVLVVGTGSVCLTGIDG-----NRIKMIDVLYIPGLDRQLLSV 297          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A6D2KB33_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB33_9BRAS)

HSP 1 Score: 60.5 bits (145), Expect = 1.410e-6
Identity = 76/316 (24.05%), Postives = 134/316 (42.41%), Query Frame = 0
Query:    4 EIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEI-NGKIMEPGGDRFEFMIEIYRLADDLNRLG-DKSVIEIKKCVIIVSGLSTDY-----------------EMECRILENNPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKG----GDRRHRPKFNRKCFSCGKGGHYARNCRAS------GESGATDNRKGGGSCKSTIVRAACGGRK------EEWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            E V R  + +  W+ L+  +  K    +  + +E+ N K  E      EF I++  L  ++N L  ++S+ E +    I+ GL  +Y                 E E  +     +    A ++    +    + R+QQ  K  + + G +  N G+     GD++   +F  KC+ CGK GH+ ++CR         ES +    +  G C    V AA  G         +W  DSG + H+       S+ ++      I  AD S   V+  G I ++ ++    T    + NV ++PG+ +NLLS++ AV+
Sbjct:   82 EHVSRCTSASSIWQALDQLFNKKNEARLQLLENELANAKQGESSIS--EFFIKVKNLCSEINTLNPEESISEARLKRSIIRGLRPEYTPFVTSVQGWATQPSLEEFENLLASQESLATQMAGVKIHDDSGSAFVARRQQSYKGKTKNDG-VKNNDGRERSSTGDKK---QF--KCYRCGKLGHFKKDCRVKLKETNMAESKSHTEDEDWGKC--FTVEAASSGTSTTKNLGNDWIVDSGCSHHITGNEKLFSSLQRHDGKEAIITADNSIHRVEKEGTIVIEGEEGGPIT----LKNVYHVPGVKKNLLSVVNAVD 383          
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Match: A0A1R3K8M3_COCAP (Integrase, catalytic core n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3K8M3_COCAP)

HSP 1 Score: 60.5 bits (145), Expect = 1.420e-6
Identity = 79/345 (22.90%), Postives = 143/345 (41.45%), Query Frame = 0
Query:    3 LEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRFEFMIEIYRLADDLNRLGDKSVI-EIKKCVIIVSGLSTDY------------EMECRILEN---NPVGLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKGG------------------DRRHRPKFNRKCFSCGKGGHYARNCRASGESG--ATDNRKGGGSCKS------------TIVRAACGGRKEE---------------WESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMDVDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE 284
            L  ++ +  P +AW  L T    K   ++ ++ +E+   I +      E+  ++  L +++++L  ++ I E +   II+ GL  +Y            E     LEN   N   LD+   +  + +    L  ++  + +  +S+      RG+ G                  ++RHR + N KC+SCGK GH+AR+CR     G  AT +R G  S +               +  AC   +E+               W  DSG + HM   +  +S     +    +  A+ S LP+   G+    V  P     +V++DNV ++ G+ +NLLS+ +  +
Sbjct:   79 LHHIKDARTPREAWDTLTTLLAKKNDAKLQQLENELLS-ISQQNISVSEYFSKVKLLCNEISKLDPENAITETRMRRIIIHGLRPEYHGIVTATRGWEKEPTLTELENILVNQETLDKQISKVSIKDDEKALFIKKGVANEGESSRSRQNWRRGQRGRRPQRGGAQPVRDKDDNEEKRHR-RQNDKCYSCGKVGHFARDCRFKQAQGNAATTSRGGIDSEEDWDFQVSFAVEEPEELATACTVEQEQETALSTVSKINFNNDWLVDSGCSNHMTGDKEKLSNTSTYAGKRMVVTANNSKLPITHIGKT---VIVPKSGQHQVQLDNVFHVSGMKKNLLSVAQLTD 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154122.3569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3YME3_9STRA1.740e-822.18Retrovirus-related Pol polyprotein from transposon... [more]
UPI00098DE8272.250e-723.25uncharacterized protein LOC109826924 n=3 Tax=Aspar... [more]
A0A6A3JYB2_9STRA3.130e-726.09CCHC-type domain-containing protein n=3 Tax=Phytop... [more]
A0A4Y2E814_ARAVE3.280e-726.25Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7N4R7_LASNI1.200e-623.16Retrovirus-related pol polyprotein from transposon... [more]
A0A6D2KMT4_9BRAS1.290e-624.05Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6D2KKQ4_9BRAS1.300e-624.05Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6A3L6P0_9STRA1.390e-626.72CCHC-type domain-containing protein n=2 Tax=Phytop... [more]
A0A6D2KB33_9BRAS1.410e-624.05Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A1R3K8M3_COCAP1.420e-622.90Integrase, catalytic core n=1 Tax=Corchorus capsul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 154..170
e-value: 0.0012
score: 28.2
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 153..169
e-value: 2.9E-4
score: 20.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 153..169
score: 10.51
NoneNo IPR availableGENE3D4.10.60.10coord: 124..181
e-value: 1.4E-5
score: 26.7
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..103
e-value: 5.1E-7
score: 29.4
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 139..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154122contigH-elongata_contig154122:481..1494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154122.3569.1mRNA_H-elongata_contig154122.3569.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154122 481..1494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154122.3569.1 ID=prot_H-elongata_contig154122.3569.1|Name=mRNA_H-elongata_contig154122.3569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
MALEIVQRSNAPNDAWRNLETHYRAKGSREILRVSHEINGKIMEPGGDRF
EFMIEIYRLADDLNRLGDKSVIEIKKCVIIVSGLSTDYEMECRILENNPV
GLDRADIERVVGNQYNRLLRQQQDSKDMSASKGHITVNRGKGGDRRHRPK
FNRKCFSCGKGGHYARNCRASGESGATDNRKGGGSCKSTIVRAACGGRKE
EWESDSGATFHMLHIRAGMSAYKKASPWMTIEIADGSTLPVDGFGRIEMD
VDQPSHTTKRVKMDNVAYMPGISRNLLSILKAVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf