prot_H-elongata_contig153317.3520.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6H5KLY3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY3_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 7.050e-11 Identity = 31/83 (37.35%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 2 ERQWKMVLKIIQYLLSNKYLGLTFERGSGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
+R W + KI+ YL +YLG+T++RGSG ++++ D++YA+ D RSVSG+A + +V Q +++L +TE +YI+
Sbjct: 177 KRHWDAIQKILGYLTGTRYLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKMQTIVSLYSTEAEYIA 258
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6H5JMV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV5_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 1.180e-10 Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
Query: 5 WKMVLKIIQYLLSNKYLGLTFERG--SGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
WK L I+ Y+ ++G+ FERG +G + ++ D++Y KA + RSVSG +I V W TQ+ +ALSTTE Y++
Sbjct: 94 WKAALGILGYVRRTSWMGIAFERGVVTGMSVQVFVDADYTSKATEHRSVSGGRVICGGGCVTWFSRTQKCVALSTTETQYVA 175
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6H5L8G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G9_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.410e-10 Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 5 WKMVLKIIQYLLSNKYLGLTFERGSGFEMS--LWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
WK K++ YLL +L L F+R S ++ ++ D+++A KA D RSVSG + + LV W+ TQ+ +A ST+E +Y++
Sbjct: 65 WKAAPKVLNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLA 146
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.540e-10 Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 5 WKMVLKIIQYLLSNKYLGLTFERGSGFEMS--LWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
WK KI+ YLL +L L F+R S ++ ++ D+++A KA D RSVSG + + LV W+ TQ+ +A ST+E +Y++
Sbjct: 494 WKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLA 575
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6L2PC32_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2PC32_TANCI) HSP 1 Score: 63.5 bits (153), Expect = 7.570e-10 Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 0
Query: 2 ERQWKMVLKIIQYLLSNKYLGLTFE--RGSGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
+ W+ V I++YL +GL +E RG+ +++ + DS+YA+ N RS++G A +++ +V W + Q V+ALSTTE +Y++
Sbjct: 1785 KNHWEAVKWILKYLRGTANVGLVYETNRGNYVDVTCFVDSDYAKDPNKGRSITGYAFLVHGCVVSWKEMLQHVVALSTTEVEYMA 1869
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 8.610e-10 Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0
Query: 5 WKMVLKIIQYLLSNKYLGLTFERGSGFEMS--LWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
WK KI+ YLL +L L F+R S ++ ++ +++A KA D RSVSG + + LV W+ TQ+ +A ST+E +Y++
Sbjct: 48 WKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLA 129
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A225UQG5_9STRA (Retrovirus-related pol Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQG5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.570e-9 Identity = 28/83 (33.73%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 2 ERQWKMVLKIIQYLLSNKYLGLTFERGSGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
E W +K+++YLL K + +T + G E++ ++D+++A +D RSVSG+ +++ A V W +Q+ +ALS+TE +Y++
Sbjct: 157 EAHWNAGIKVVRYLLKTKKVAITSDGLLGTELTAYSDADWAGNRDDRRSVSGMVLMMCDAPVVWRSTSQKTVALSSTEAEYMA 239
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A5B6VMY0_9ROSI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6VMY0_9ROSI) HSP 1 Score: 61.6 bits (148), Expect = 1.990e-9 Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0
Query: 10 KIIQYLLSNKYLGLTFERGSGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
++++YL G+ +++G EM +TDS+YAE D++S SG A ++ V WS QR+I LSTTE +++
Sbjct: 72 RVLRYLKGTTDYGVFYKKGGASEMVAYTDSDYAEDKEDSKSTSGYAFMMCGGAVAWSSRKQRIITLSTTEAKFVA 146
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A6L2JGK7_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JGK7_TANCI) HSP 1 Score: 61.2 bits (147), Expect = 4.800e-9 Identity = 30/85 (35.29%), Postives = 53/85 (62.35%), Query Frame = 0
Query: 2 ERQWKMVLKIIQYLLSNKYLGLTF--ERGSGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
+ W+ V I++YL +GL + RG+ +++ + +SNYA+ N RS+SG A +++ +V W + Q V+ALSTTE +Y++
Sbjct: 687 KNHWEAVKWILKYLRGTINVGLVYGTNRGNHVDVTSFVNSNYAKDPNKGRSISGYAFLVHGYVVSWKAMLQHVVALSTTEAEYMA 771
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Match: A0A5N6LXA4_9ASTR (PI-PLC Y-box domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LXA4_9ASTR) HSP 1 Score: 60.5 bits (145), Expect = 8.870e-9 Identity = 27/75 (36.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query: 10 KIIQYLLSNKYLGLTFERGSGFEMSLWTDSNYAEKANDTRSVSGVAIILYFALVGWSRLTQRVIALSTTEDDYIS 84
+I++Y+ + GLT+ R + ++ ++ DS+YA +D +S SG IL A V WS Q ++ALS+TE +Y++
Sbjct: 446 RILRYVKATYDYGLTYARNASLKLKVYMDSDYARDVDDRKSTSGYVCILSNAAVSWSSQKQEIVALSSTEAEYVA 520 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153317.3520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig153317.3520.1 ID=prot_H-elongata_contig153317.3520.1|Name=mRNA_H-elongata_contig153317.3520.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bpback to top |