prot_H-elongata_contig152684.3481.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig152684.3481.1
Unique Name	prot_H-elongata_contig152684.3481.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	89

Homology

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: D7FLF2_ECTSI (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF2_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 5.900e-45
Identity = 78/86 (90.70%), Postives = 83/86 (96.51%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            PT+TSGAEGIVA ACHD+ADTVVTGIVGCAGLLPTVEAIK+KKTIALANKETLIAGGPAVLPLL+  GVDM+PADSEHSAIFQCLQ
Sbjct:  112 PTVTSGAEGIVATACHDDADTVVTGIVGCAGLLPTVEAIKRKKTIALANKETLIAGGPAVLPLLKEYGVDMVPADSEHSAIFQCLQ 197

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A835ZCZ6_9STRA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.700e-38
Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            P + +G  GIVAAA HD+ DTVVTGIVGCAGLLPTVEAIKK+KTIALANKETLIAGGP V+PL R  GVDMIPADSEHSAIFQCLQ
Sbjct:  111 PELAAGQAGIVAAASHDDCDTVVTGIVGCAGLLPTVEAIKKRKTIALANKETLIAGGPVVVPLCREYGVDMIPADSEHSAIFQCLQ 196

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A6V1P662_HETAK (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P662_HETAK)

HSP 1 Score: 128 bits (321), Expect = 3.130e-33
Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            P + +G EGI A A   +ADTVVTGIVGCAGLLPT+EAIK  KTIALANKETLIAGGP +LPLL  +GVDMIPADSEHSAIFQ LQ
Sbjct:  138 PEMGAGNEGICAVAAAQDADTVVTGIVGCAGLLPTIEAIKAGKTIALANKETLIAGGPIILPLLEEHGVDMIPADSEHSAIFQSLQ 223

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: B2KJ91_PHATR (1-deoxy-D-xylulose-5-phosphate reductoisomerase (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B2KJ91_PHATR)

HSP 1 Score: 124 bits (311), Expect = 4.160e-33
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            P I SG EGIVAAA  D ADTVVTGIVG AGL PT+EAIK KK IALANKETLI+GGP + PL+   G++M+PADSEHSAIFQCLQ
Sbjct:  154 PLILSGQEGIVAAATVDTADTVVTGIVGAAGLEPTIEAIKMKKDIALANKETLISGGPVINPLVEKYGINMLPADSEHSAIFQCLQ 239

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A448Z184_9STRA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z184_9STRA)

HSP 1 Score: 127 bits (319), Expect = 8.050e-33
Identity = 64/86 (74.42%), Postives = 74/86 (86.05%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            PTI  G EGI+AAA  D ADTVVTGIVG AGLLPT+EAIK KK IALANKETLI+GGP + PL++ +G++M+PADSEHSAIFQCLQ
Sbjct:  150 PTIMHGEEGILAAATIDTADTVVTGIVGSAGLLPTIEAIKLKKDIALANKETLISGGPVINPLVKEHGINMLPADSEHSAIFQCLQ 235

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A4D9CU67_9STRA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU67_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.330e-32
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            P + +G EG++A A  D A+ VVTGIVGCAGLLPTVEAIK +KTIALANKETLI+GGPA++PLL+  GV++IPADSEHSAIFQ LQ
Sbjct:  136 PMLGAGQEGVIACATEDAANVVVTGIVGCAGLLPTVEAIKARKTIALANKETLISGGPAIVPLLKEYGVNVIPADSEHSAIFQSLQ 221

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A7S2BEC1_9STRA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEC1_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.160e-32
Identity = 64/84 (76.19%), Postives = 68/84 (80.95%), Query Frame = 0

Query:    3 ITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            +  GAEG+ A A  DEA  VVTGIVGCAGLLPT+EAIKKKK IALANKETLIAGGP +LPLL   GV M PADSEHSAIFQ LQ
Sbjct:   51 VMGGAEGVNAVATEDEAGVVVTGIVGCAGLLPTIEAIKKKKRIALANKETLIAGGPVILPLLEEYGVTMTPADSEHSAIFQALQ 134

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A7S1LQI9_ALECA (1-deoxy-D-xylulose-5-phosphate reductoisomerase (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LQI9_ALECA)

HSP 1 Score: 125 bits (313), Expect = 2.420e-32
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            P +  G +G +A AC++E+ TVVTGIVGCAGL+PT+EAIK KK IALANKETLIAGGP + P+   +GV M+P DSEHSAIFQCLQ
Sbjct:   93 PVLLGGKDGQIAVACYEESKTVVTGIVGCAGLIPTIEAIKAKKDIALANKETLIAGGPVIAPMFEEHGVSMLPVDSEHSAIFQCLQ 178

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A086CHR4_9CHRO (1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Candidatus Atelocyanobacterium thalassa TaxID=713887 RepID=A0A086CHR4_9CHRO)

HSP 1 Score: 123 bits (309), Expect = 6.630e-32
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            P I +G +G++  AC+ + +++VTGIVGCAGLLPT+EAIK  K IALANKETLIAGGP VLPL+   GV ++PADSEHSAIFQCLQ
Sbjct:   76 PIIVAGDQGVIEVACYGDTESIVTGIVGCAGLLPTIEAIKAGKDIALANKETLIAGGPVVLPLIEKYGVKLLPADSEHSAIFQCLQ 161

[Close]

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Match: A0A7C3KFI6_9CYAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KFI6_9CYAN)

HSP 1 Score: 123 bits (309), Expect = 7.510e-32
Identity = 62/86 (72.09%), Postives = 71/86 (82.56%), Query Frame = 0

Query:    1 PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANKETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQ 86
            PT+ +G EGIV  A   EAD VVTGIVGCAGLLPT+ AIK  K IALANKETLIAGGP VLPL++ +G+ ++PADSEHSAIFQCLQ
Sbjct:   76 PTLLAGEEGIVEIARTPEADVVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLIQEHGIKLLPADSEHSAIFQCLQ 161

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot

BLAST of mRNA_H-elongata_contig152684.3481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FLF2_ECTSI	5.900e-45	90.70	1-deoxy-D-xylulose-5-phosphate reductoisomerase n=...	[more]
A0A835ZCZ6_9STRA	1.700e-38	82.56	1-deoxy-D-xylulose-5-phosphate reductoisomerase n=...	[more]
A0A6V1P662_HETAK	3.130e-33	76.74	1-deoxy-D-xylulose-5-phosphate reductoisomerase n=...	[more]
B2KJ91_PHATR	4.160e-33	74.42	1-deoxy-D-xylulose-5-phosphate reductoisomerase (F...	[more]
A0A448Z184_9STRA	8.050e-33	74.42	1-deoxy-D-xylulose-5-phosphate reductoisomerase n=...	[more]
A0A4D9CU67_9STRA	1.330e-32	72.09	1-deoxy-D-xylulose-5-phosphate reductoisomerase n=...	[more]
A0A7S2BEC1_9STRA	2.160e-32	76.19	1-deoxy-D-xylulose-5-phosphate reductoisomerase n=...	[more]
A0A7S1LQI9_ALECA	2.420e-32	67.44	1-deoxy-D-xylulose-5-phosphate reductoisomerase (F...	[more]
A0A086CHR4_9CHRO	6.630e-32	67.44	1-deoxy-D-xylulose 5-phosphate reductoisomerase n=...	[more]
A0A7C3KFI6_9CYAN	7.510e-32	72.09	1-deoxy-D-xylulose 5-phosphate reductoisomerase n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013512	1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal	PFAM	PF02670	DXP_reductoisom	coord: 2..57 e-value: 3.0E-18 score: 66.8
None	No IPR available	GENE3D	3.40.50.720		coord: 1..75 e-value: 1.1E-23 score: 86.1
IPR003821	1-deoxy-D-xylulose 5-phosphate reductoisomerase	PANTHER	PTHR30525	1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE	coord: 1..86
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 3..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig152684	contig	H-elongata_contig152684:174..674 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig152684.3481.1	mRNA_H-elongata_contig152684.3481.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig152684 174..674 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig152684.3481.1 ID=prot_H-elongata_contig152684.3481.1|Name=mRNA_H-elongata_contig152684.3481.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
PTITSGAEGIVAAACHDEADTVVTGIVGCAGLLPTVEAIKKKKTIALANK
ETLIAGGPAVLPLLRANGVDMIPADSEHSAIFQCLQVR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013512	DXP_reductoisomerase_N
IPR003821	DXP_reductoisomerase
IPR036291	NAD(P)-bd_dom_sf