prot_H-elongata_contig152585.3473.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: D8LN22_ECTSI (PFfh, plastid Ffh subunit of the signal recognition particle n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN22_ECTSI) HSP 1 Score: 157 bits (397), Expect = 3.400e-43 Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 0
Query: 1 MSDKEAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVS 108
MS++EA +A+KMIN EFDFNDFLKQ KMMK MG+LGGVA M+PGMAGK++PQQLNQ EEG++RAEGLI+ MT EER+ PKLLI DPTSQ R RRIA+DAGVKLSAVS
Sbjct: 375 MSEEEAAKLAKKMINAEFDFNDFLKQAKMMKGMGSLGGVANMIPGMAGKITPQQLNQAEEGVQRAEGLIKFMTPEERRTPKLLILDPTSQARCRRIARDAGVKLSAVS 482
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: A0A7R9WX50_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX50_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.630e-25 Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 0
Query: 1 MSDKEAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAG 101
+SD+EA M KM+ EFDF+DFLKQ K++ NMG+L GVAKM+PGMAG + Q+ EE +K+ E +I MT +ER P+LLISD T++ RL+RIAK +G
Sbjct: 28 VSDEEARLMQEKMMKAEFDFDDFLKQAKLVSNMGSLAGVAKMMPGMAGNIDAGQIRNAEERMKKNEAMICSMTKKERAQPELLISDATARSRLQRIAKGSG 128
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: A0A7R9U2M9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2M9_9STRA) HSP 1 Score: 104 bits (260), Expect = 7.140e-24 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 0
Query: 1 MSDKEAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVS 108
+S+K+AE M KM+++ FDF+DFL+Q KM+ NMG++ GV KMLPGMAG+LS QL E+ + RAEGLI+ MT +ER+ P LLI D +++ RL RIA +G L S
Sbjct: 394 VSEKQAERMVNKMLDQTFDFDDFLQQTKMVSNMGSMAGVLKMLPGMAGQLSNDQLRMAEKRMARAEGLIQCMTPKERKTPDLLIRDRSARARLIRIATASGQSLDEAS 501
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: A0A7S1U8S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S0_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.170e-23 Identity = 55/105 (52.38%), Postives = 80/105 (76.19%), Query Frame = 0
Query: 1 MSDKEAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLS 105
+S +AE M KM+++ FDF+DFLKQ KM+ NMGN+ GV KMLPGMAGK+ QL + + ++RAE LI+ MT EER++P LLI D ++++RL RIA+ AG++++
Sbjct: 388 VSKDDAEVMMNKMLDQTFDFDDFLKQAKMINNMGNMAGVMKMLPGMAGKIDNNQLREGQRRMRRAEKLIKEMTPEERKEPDLLIRDRSARERLGRIAEAAGLEIN 492
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: A0A448Z1S5_9STRA (SRP54 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z1S5_9STRA) HSP 1 Score: 101 bits (252), Expect = 8.750e-23 Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 0
Query: 1 MSDKEAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAV 107
M+DKEA+ M K+ N EFDF+DFLKQ KM+ MG+LGGVAKM+PGM G +S +QL E+ +K+ E +I VMT EER++P LLI D S++RL+RIAK + + + V
Sbjct: 411 MTDKEAKLMEEKVKNAEFDFDDFLKQAKMVSKMGSLGGVAKMMPGM-GSVSQEQLIAAEKRLKKNEAMIAVMTEEERKNPDLLIKDSKSRERLQRIAKFSEMDIKDV 516
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: UPI0017474A0C (signal recognition particle protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI0017474A0C) HSP 1 Score: 100 bits (248), Expect = 2.430e-22 Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 0
Query: 5 EAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVS 108
+AE + K++ +FDF DFLKQ +MMKNMG+L G+ K++PGM GK+S +QL Q E +KRAE +I MT EER++P LL P+ +QR IAK AG L+ VS
Sbjct: 314 DAEQLQEKILTAKFDFTDFLKQTRMMKNMGSLAGIVKLIPGMGGKISDEQLQQGEAQLKRAEAMISSMTIEERRNPDLLAGSPSRRQR---IAKGAGYSLNDVS 414
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: UPI0019F74F5C (Signal recognition particle protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019F74F5C) HSP 1 Score: 99.8 bits (247), Expect = 3.420e-22 Identity = 53/104 (50.96%), Postives = 75/104 (72.12%), Query Frame = 0
Query: 5 EAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVS 108
+AE + +K++ +FDF+DFLKQ ++MKNMG+LGG+ K++PGMAGK+S QL Q E +KR E +I MT +ER++P+LL P+ R RRIAK AG + VS
Sbjct: 314 DAEKLQKKILEAQFDFDDFLKQTRLMKNMGSLGGIMKLIPGMAGKISDDQLQQGEAQLKRVEAMINSMTRDERKNPELLSGSPS---RRRRIAKGAGYQEKDVS 414
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: K9RTX2_SYNP3 (Signal recognition particle protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RTX2_SYNP3) HSP 1 Score: 99.4 bits (246), Expect = 4.390e-22 Identity = 52/104 (50.00%), Postives = 79/104 (75.96%), Query Frame = 0
Query: 5 EAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVS 108
+AE+M RK++ +FDFNDFLKQ +++KNMG+LGG+ K++PGM GK+S +QL Q E +KRAE +I MT +ER++P+LL + P+ R +R+A+ +G KL V+
Sbjct: 314 DAENMTRKILEAQFDFNDFLKQTRLLKNMGSLGGIMKLIPGM-GKISNEQLEQGESQLKRAESMINSMTRQERENPQLLANSPS---RKKRVAQGSGHKLEDVA 413
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: A0A846A4R2_9CYAN (Signal recognition particle protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A4R2_9CYAN) HSP 1 Score: 97.8 bits (242), Expect = 1.080e-21 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 0
Query: 5 EAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVS 108
+AE + K++ +FDFNDFLKQ ++MKNMG+LGG+ K++PGMA K+S QL Q E+ +KR E +I MT +ER++P+LL S P+ R RRIA +G K VS
Sbjct: 238 DAEKLQEKILEAKFDFNDFLKQTRLMKNMGSLGGIMKLIPGMANKISSDQLEQGEKQLKRVESMINSMTLQERKNPELLSSSPS---RRRRIASGSGHKEKDVS 338
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Match: A0A835YMH5_9STRA (SRP54-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.080e-21 Identity = 53/111 (47.75%), Postives = 79/111 (71.17%), Query Frame = 0
Query: 1 MSDKEAEDMARKMINKEFDFNDFLKQNKMMKNMGNLGGVAKMLPGMAGKLSPQQLNQVEEGIKRAEGLIEVMTSEERQDPKLLISDPTSQQRLRRIAKDAGVKLSAVSVSV 111
+S+ E +++KM++ FDFNDFL+Q+K+++NMG++ VAKM+PGMAGKLS QQ++ E+ +RA+ I +M EER +P LLI D + QR RRIAK A V+ V+ +
Sbjct: 399 VSEAEMAQLSQKMMDATFDFNDFLEQSKVVRNMGSMANVAKMIPGMAGKLSQQQMDDAEDRAERADLFISLMLPEERTNPDLLIRDAAALQRQRRIAKAAQVRPQDVAAFI 509 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152585.3473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig152585.3473.1 ID=prot_H-elongata_contig152585.3473.1|Name=mRNA_H-elongata_contig152585.3473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bpback to top |