prot_H-elongata_contig152311.3456.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152311.3456.1
Unique Nameprot_H-elongata_contig152311.3456.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.470e-60
Identity = 90/95 (94.74%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            MLRFTDDTFD+HLQSTIGVDFKVKM+DAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRP+TFDNLSKWLEEVETYHPGRGREV++
Sbjct:   29 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVK 123
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.340e-54
Identity = 81/95 (85.26%), Postives = 91/95 (95.79%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            MLRFTDD+FD+ LQSTIGVDFKVKM++ G K+IKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDV RP+TFDNL+KWLEEVETYHPGRGR+V++
Sbjct:   27 MLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVERPETFDNLNKWLEEVETYHPGRGRDVVK 121
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 161 bits (407), Expect = 3.030e-48
Identity = 74/95 (77.89%), Postives = 84/95 (88.42%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFTDDTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+V++
Sbjct:   29 LLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVK 123
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.640e-47
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFT+DTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL  WL+EV+ Y P  GR+V++
Sbjct:   29 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDTWLQEVQVYSPANGRDVVK 123
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: A0A024TX33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TX33_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.600e-47
Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFT+DTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF NL  WL+EVE Y P  GR+V++
Sbjct:   46 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFANLDTWLQEVEVYSPANGRDVVK 140
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 157 bits (397), Expect = 7.640e-47
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFTDDTFD++LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL  WL+EVE Y P  GR+V++
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVK 118
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD)

HSP 1 Score: 157 bits (397), Expect = 7.870e-47
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFTDDTFD++LQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL  WL+EVE Y P  G++V++
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGKDVVK 118
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: W2NT60_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2NT60_PHYPR)

HSP 1 Score: 157 bits (397), Expect = 8.350e-47
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFTDDTFD++LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL  WL+EVE Y P  GR+V++
Sbjct:   45 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVK 139
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: A0A7S1H2S8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2S8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.190e-46
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFTDD+FDEH+QSTIGVDFKVK LD  GKR+K+TIWDTAGQERFRTLTSSYYRGA G+  VYDVTRPDTF+NL +WL+EV+ Y P  G  V++
Sbjct:   31 LLRFTDDSFDEHIQSTIGVDFKVKHLDVNGKRVKLTIWDTAGQERFRTLTSSYYRGAHGVCFVYDVTRPDTFENLDQWLKEVKLYAPNNGESVVK 125
[Close]
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.430e-46
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0 
Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR 95
            +LRFTDDTFD++LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R DTF+NL  WL+EVE Y P  GR+V++
Sbjct:   64 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVK 158
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152311.3456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G245_ECTSI1.470e-6094.74Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YPZ0_9STRA3.340e-5485.26Rab18, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A067C8B0_SAPPC3.030e-4877.89Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A485LUC0_9STRA1.640e-4776.84Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A024TX33_9STRA3.600e-4777.89Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
D0NMU9_PHYIT7.640e-4776.84Rab18 family GTPase, putative n=6 Tax=Oomycota Tax... [more]
K3WMM1_GLOUD7.870e-4776.84Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
W2NT60_PHYPR8.350e-4776.84Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A7S1H2S8_9STRA2.190e-4673.68Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A6A3N672_9STRA2.430e-4676.84Uncharacterized protein n=21 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 26..48
score: 48.02
coord: 8..24
score: 33.83
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..95
e-value: 6.8E-24
score: 95.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1..93
e-value: 8.3E-33
score: 115.2
NoneNo IPR availablePANTHERPTHR24073:SF1064coord: 1..85
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..85
NoneNo IPR availablePROSITEPS51419RABcoord: 1..95
score: 21.047
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 3..87
e-value: 1.1E-12
score: 46.0
IPR001806Small GTPasePFAMPF00071Rascoord: 1..87
e-value: 8.2E-32
score: 110.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152311contigH-elongata_contig152311:465..1399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152311.3456.1mRNA_H-elongata_contig152311.3456.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152311 465..1405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152311.3456.1 ID=prot_H-elongata_contig152311.3456.1|Name=mRNA_H-elongata_contig152311.3456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MLRFTDDTFDEHLQSTIGVDFKVKMLDAGGKRIKMTIWDTAGQERFRTLT
SSYYRGAQGIMLVYDVTRPDTFDNLSKWLEEVETYHPGRGREVMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase