prot_H-elongata_contig151143.3397.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI) HSP 1 Score: 172 bits (436), Expect = 2.830e-48 Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
+GRLYDHACC +LYEMTVEDG+AVVTSVE RRVTKARPIPM TVELQKRASRFCHI SERTMHVAEALYQRGIISYPRTETEKFKREFDI
Sbjct: 68 RGRLYDHACCAILYEMTVEDGVAVVTSVEARRVTKARPIPMSTVELQKRASRFCHISSERTMHVAEALYQRGIISYPRTETEKFKREFDI 157
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A8J6CBF4_DIALT (DNA topoisomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBF4_DIALT) HSP 1 Score: 109 bits (273), Expect = 6.340e-26 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
+GRL+D C VLYEM VE+ A V +V RR T+A+PIP+ TVELQ+ ASR I S+RTM +AE+LYQRG +SYPRTET+KFK D+
Sbjct: 257 RGRLFDRLACVVLYEMCVEEPEATVVAVNRRRTTRAKPIPLATVELQREASRKLRIASDRTMAIAESLYQRGYLSYPRTETDKFKEGTDL 346
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.160e-25 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
+GRL+D L E+ + G AVVT+V R T+ RP+PM TVELQ+RASRF IPSER M AEALYQRG++SYPRTET+ F RE D+
Sbjct: 85 RGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDL 174
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A024GUU9_9STRA (DNA topoisomerase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUU9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.330e-24 Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 4 RLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
RLYD CC V+YE+ V++ IA +TSVE + K +P+P+ TVELQKRASR+ I SE TM AE LY +G ISYPRTET KFK D+
Sbjct: 261 RLYDRLCCLVIYEILVQNPIAKITSVEKKPTCKRKPLPLTTVELQKRASRWLRISSEETMKAAEHLYNKGFISYPRTETSKFKEGTDL 348
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A024GV12_9STRA (DNA topoisomerase n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GV12_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.410e-24 Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 4 RLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
RLYD CC V+YE+ V++ IA +TSVE + K +P+P+ TVELQKRASR+ I SE TM AE LY +G ISYPRTET KFK D+
Sbjct: 261 RLYDRLCCLVIYEILVQNPIAKITSVEKKPTCKRKPLPLTTVELQKRASRWLRISSEETMKAAEHLYNKGFISYPRTETSKFKEGTDL 348
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A7I8L3W2_SPIIN (DNA topoisomerase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L3W2_SPIIN) HSP 1 Score: 101 bits (252), Expect = 4.290e-23 Identity = 50/90 (55.56%), Postives = 63/90 (70.00%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
+GRL+D+ C ++YEM VE IA V +V+ ++ K P P+ TVELQKRASR+ I SERTM VAE LYQ G ISYPRTET+ F D+
Sbjct: 271 RGRLFDYTCSVIIYEMCVEQPIATVKNVKQQQKLKYPPFPLSTVELQKRASRYFRISSERTMKVAEELYQAGFISYPRTETDSFSVNTDL 360
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A0D1WU41_9EURO (DNA topoisomerase n=1 Tax=Exophiala sideris TaxID=1016849 RepID=A0A0D1WU41_9EURO) HSP 1 Score: 100 bits (250), Expect = 7.660e-23 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 0
Query: 5 LYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDIK 92
L+D A T+L+E +++ +A VT V+ + +K RP+P+ TVELQK+ SRF H+ S + M VAE LYQ+G ISYPRTET++F REFD +
Sbjct: 261 LFDRAAVTILFEACLDEKLATVTKVQKKPTSKWRPLPLTTVELQKQGSRFLHMTSHQVMSVAEKLYQKGFISYPRTETDQFPREFDFQ 348
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A1D1YBY8_9ARAE (DNA topoisomerase (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YBY8_9ARAE) HSP 1 Score: 100 bits (250), Expect = 8.000e-23 Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDIK 92
+GRL+D+ C +LYEM VE IA V +V + K P P+ TVELQKRASR+ I SERTM VAE LYQ G ISYPRTET+ F D++
Sbjct: 280 RGRLFDYTCSVILYEMCVEQPIATVKNVRHQEKLKYPPYPLSTVELQKRASRYFRISSERTMKVAEELYQAGFISYPRTETDGFSVNTDLR 370
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: A0A8H4A1Y6_GIGMA (DNA topoisomerase n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A1Y6_GIGMA) HSP 1 Score: 99.4 bits (246), Expect = 2.760e-22 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDIK 92
+ L+D C ++YE +E+ A V V+ + V K +P P+ TVELQK SR+ HI S+R MHVAE LY +G+ISYPRTET++F ++FD +
Sbjct: 254 RNHLFDRLACVIIYEKCLENPTATVVEVKSKEVKKWKPYPLTTVELQKTGSRYLHISSDRLMHVAEQLYVKGLISYPRTETDQFDKQFDFR 344
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Match: UPI000D2F27BE (DNA topoisomerase 3-alpha isoform X2 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI000D2F27BE) HSP 1 Score: 99.4 bits (246), Expect = 2.780e-22 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 0
Query: 2 QGRLYDHACCTVLYEMTVEDGIAVVTSVEPRRVTKARPIPMCTVELQKRASRFCHIPSERTMHVAEALYQRGIISYPRTETEKFKREFDI 91
+G L+D+ C ++YEM +E+ A VT V P+ K P P+ T+EL+KRASR+ + SERTM VAE LYQ G ISYPRTET+ F D+
Sbjct: 264 RGHLFDYTCAVIIYEMCIEEPTATVTKVTPKEKPKYPPHPLSTIELEKRASRYFRMSSERTMKVAEELYQGGFISYPRTETDNFSSRTDL 353 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151143.3397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig151143.3397.1 ID=prot_H-elongata_contig151143.3397.1|Name=mRNA_H-elongata_contig151143.3397.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bpback to top |