prot_H-elongata_contig145009.3085.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145009.3085.1
Unique Nameprot_H-elongata_contig145009.3085.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A6H5K6R3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6R3_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 4.120e-13
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELVSGCVSFEATR 47
            MTVR+RLQR GRRNRPFYRVVVADSR+PRDGKFIELV G  +  ATR
Sbjct:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV-GTYNPLATR 46          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A660UMP8_9BACT (30S ribosomal protein S16 n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A660UMP8_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 8.780e-12
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            M VRIRLQR GRRNRPFYRVVVADSRSPRDGK+IE +
Sbjct:    1 MPVRIRLQRAGRRNRPFYRVVVADSRSPRDGKYIEKI 37          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A7C2PIK7_9BACT (30S ribosomal protein S16 n=2 Tax=Caldimicrobium sp. TaxID=2024963 RepID=A0A7C2PIK7_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 9.680e-12
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIE 35
            M VRIRL RFGRRNRPFYRVVVADSR+PRDGK+I+
Sbjct:    1 MPVRIRLMRFGRRNRPFYRVVVADSRAPRDGKYID 35          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A524AQC4_9CHLR (30S ribosomal protein S16 n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A524AQC4_9CHLR)

HSP 1 Score: 61.2 bits (147), Expect = 4.780e-11
Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    3 VRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            V+IRL+R GRRN+PFYRVVVADSRSPRDGKFI+++
Sbjct:    2 VKIRLRRMGRRNKPFYRVVVADSRSPRDGKFIDII 36          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A836CM62_9STRA (Putative 30S ribosomal protein S16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM62_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.080e-11
Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            M VR+RLQRFG +N+PFYRVV AD+R+PRDGKFIE+V
Sbjct:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIV 37          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: I4BXZ6_ACEMN (30S ribosomal protein S16 n=6 Tax=Synergistaceae TaxID=649777 RepID=I4BXZ6_ACEMN)

HSP 1 Score: 60.8 bits (146), Expect = 6.790e-11
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            M VRIRL R GR+ RPFYR+VVADSRSPRDGKFIE++
Sbjct:    1 MVVRIRLARHGRKKRPFYRLVVADSRSPRDGKFIEMI 37          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: UPI001BEE215D (30S ribosomal protein S16 n=1 Tax=Tenericutes bacterium TaxID=2231116 RepID=UPI001BEE215D)

HSP 1 Score: 60.8 bits (146), Expect = 6.960e-11
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELVSGCVSFEATRVP 49
            M V++RLQRFG + +PFYRVV ADSRSPRDG+FIE+V    +++A + P
Sbjct:    1 MAVKLRLQRFGSKKKPFYRVVAADSRSPRDGRFIEIVG---TYDAVKQP 46          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A7C5RW04_9BACT (30S ribosomal protein S16 n=1 Tax=Candidatus Calescamantes bacterium TaxID=2268183 RepID=A0A7C5RW04_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 7.180e-11
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    3 VRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            VRIRLQRFGR+  PFYR+V ADSRSPRDGKFIE++
Sbjct:    2 VRIRLQRFGRKKDPFYRIVAADSRSPRDGKFIEII 36          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: A0A7Z9ZXM2_9BACT (30S ribosomal protein S16 n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7Z9ZXM2_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 7.820e-11
Identity = 27/37 (72.97%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            M VRIRL R GRRNRPFYR+VVAD+++PRDGKF+E++
Sbjct:    1 MPVRIRLMRMGRRNRPFYRIVVADAKAPRDGKFVEII 37          
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Match: UPI000402F478 (30S ribosomal protein S16 n=1 Tax=Thermodesulfobacterium hveragerdense TaxID=53424 RepID=UPI000402F478)

HSP 1 Score: 60.5 bits (145), Expect = 8.740e-11
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELV 37
            M VRIRL RFGR+ RPFYRVV ADSRSPRDGKF++++
Sbjct:    1 MPVRIRLMRFGRKKRPFYRVVAADSRSPRDGKFLDIL 37          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145009.3085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6R3_9PHAE4.120e-1380.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A660UMP8_9BACT8.780e-1286.4930S ribosomal protein S16 n=1 Tax=Candidatus Porib... [more]
A0A7C2PIK7_9BACT9.680e-1285.7130S ribosomal protein S16 n=2 Tax=Caldimicrobium s... [more]
A0A524AQC4_9CHLR4.780e-1180.0030S ribosomal protein S16 n=2 Tax=Dehalococcoidia ... [more]
A0A836CM62_9STRA5.080e-1175.68Putative 30S ribosomal protein S16 n=1 Tax=Tribone... [more]
I4BXZ6_ACEMN6.790e-1178.3830S ribosomal protein S16 n=6 Tax=Synergistaceae T... [more]
UPI001BEE215D6.960e-1159.1830S ribosomal protein S16 n=1 Tax=Tenericutes bact... [more]
A0A7C5RW04_9BACT7.180e-1180.0030S ribosomal protein S16 n=1 Tax=Candidatus Cales... [more]
A0A7Z9ZXM2_9BACT7.820e-1172.9730S ribosomal protein S16 n=1 Tax=Armatimonadetes ... [more]
UPI000402F4788.740e-1175.6830S ribosomal protein S16 n=1 Tax=Thermodesulfobac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 3..37
e-value: 3.6E-16
score: 56.9
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 9..37
e-value: 1.9E-12
score: 47.0
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 1..37
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..39
e-value: 5.7E-17
score: 63.6
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 3..37
NoneNo IPR availablePANTHERPTHR12919:SF2037S RIBOSOMAL PROTEIN S16, MITOCHONDRIALcoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145009contigH-elongata_contig145009:510..662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145009.3085.1mRNA_H-elongata_contig145009.3085.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145009 510..662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145009.3085.1 ID=prot_H-elongata_contig145009.3085.1|Name=mRNA_H-elongata_contig145009.3085.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MTVRIRLQRFGRRNRPFYRVVVADSRSPRDGKFIELVSGCVSFEATRVPP
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf