prot_H-elongata_contig14417.3035.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig14417.3035.1
Unique Name	prot_H-elongata_contig14417.3035.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	971

Homology

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 8.090e-133
Identity = 324/509 (63.65%), Postives = 377/509 (74.07%), Query Frame = 0

Query:  463 RYMAIVESAIVTSALDLSSTSEH-DTSPSEDDGGMM-EILTDRLMEACNKIEQVTATPTDELSDGAPSIRRRGAGAP----PSAMRRRQASNMSSRALASSMLPTEVEEKFPDSDEEGIARDEGAAARKLRRERVKKRARAHSRRKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRATPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASDPIIWRKLKREGFLRDSGENFDLLAAVEGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADLTDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLRNLAARMDSIHRILSG 965
            RYMAIVE+A V SALD SSTSEH DTSPSEDDGGMM EILTDRLME C+K+EQ  A+P  +LSDGA      G G      PS  RRRQ SNMS+R L S +   E EE+  DSDE G   D GAAARKLRRER++KRA+    RK++  L VP D++G+ I VH+AAY+G+ D++K+Y+SQGGDLE+RD F+AT LML +ER         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLA+DP I R L+ E  +R SGENFDLL AVE NDT A+ +FIAMGQ+ CG+P N  AVA+A++RLRL+R GRGGM+AVHLAAFHGYAD+LR+LL +G+DPNAV DDGETPLHTAC GGS L                        CEK IA GRQ+MKHLLE KAFQATPA LL LRADL +VALQIDAEE+LFVRKGVAIKY+RKALKK++ D+                LA RM+S+H++L G
Sbjct:  662 RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMALGGGGVHKRRPS--RRRQLSNMSNRTLHS-VAGGEGEEEDADSDE-GSVMDAGAAARKLRRERLRKRAKQS--RKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXX--CEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKG 1162

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 6.910e-10
Identity = 121/366 (33.06%), Postives = 175/366 (47.81%), Query Frame = 0

Query:  599 SRRKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRATPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASDPIIWRKLKREGFLRDSGENFDLLAAVEGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADLTDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLRNLAARMDSIHRILS 964
            S RK   + T  +  +   +  H AAY G++  ++ Y   GGDLE RD++RATPL+LA+E+           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LAS   I   L  +    +S    D++ AVE ND   L SFI+   D                   L+++G+  MT +H+A+F+G  D +RMLL                                               G  P E+      Q    LLE +++++ P  +  +R     + L++D  E +FV+K +AIK +R A++ +++++  L+               +M +I  I++
Sbjct:   47 SSRKPGSSRTGRSKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKE--TESKLGVDVIEAVERNDVAGLKSFISGKGD-------------------LNQKGKNDMTPLHVASFNGRTDIVRMLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQ---LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMN 386

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A1J3IX16_NOCCA (E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IX16_NOCCA)

HSP 1 Score: 70.5 bits (171), Expect = 6.260e-9
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0

Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A     T CA ++L+ GG  +   ++AKG  P    +A
Sbjct:  170 REGSGPSVA-HICSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAVVILENGGSRSMAISNAKGLTPLHMCVA 251

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A1J3GB03_NOCCA (E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GB03_NOCCA)

HSP 1 Score: 70.5 bits (171), Expect = 1.090e-8
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0

Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A     T CA ++L+ GG  +   ++AKG  P    +A
Sbjct:  396 REGSGPSVA-HICSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAVVILENGGSRSMAISNAKGLTPLHMCVA 477

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A7N2KMI5_QUELO (RING-type E3 ubiquitin transferase n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2KMI5_QUELO)

HSP 1 Score: 70.1 bits (170), Expect = 2.260e-8
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0

Query:  794 GMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            G +  H+ A++G  D +R LL++GADPNAV DDGET LH A +   T CA ++L+ GG  +  A ++KG  P    IA
Sbjct:  567 GRSVAHVCAYYGQPDCMRELLLAGADPNAVDDDGETVLHIAVSKKFTDCAIVILENGGCKSMGALNSKGLTPLHLCIA 644

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A397ZSD3_BRACM (Uncharacterized protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397ZSD3_BRACM)

HSP 1 Score: 69.3 bits (168), Expect = 2.800e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0

Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  566 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 641

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A0D3B0Z0_BRAOL (RING-type E3 ubiquitin transferase n=15 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3B0Z0_BRAOL)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0

Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  563 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 638

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BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: UPI00142E1CCD (E3 ubiquitin-protein ligase KEG isoform X3 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E1CCD)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0

Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  566 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 641

[Close]

BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A816I147_BRANA (RING-type E3 ubiquitin transferase n=2 Tax=Brassica TaxID=3705 RepID=A0A816I147_BRANA)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0

Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  564 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 639

[Close]

BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A200R767_9MAGN (RING-type E3 ubiquitin transferase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R767_9MAGN)

HSP 1 Score: 69.3 bits (168), Expect = 3.900e-8
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 0

Query:  794 GMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            G T  H+ A+HG  D +R LLM+GADPNAV D+GET LH A     T CA  +L+ GG  +    + K   P    IA
Sbjct:  589 GPTVAHVCAYHGQPDCMRELLMAGADPNAVDDEGETVLHRAINKKYTACAVAILENGGCRSMGILNTKNLTPLHMCIA 666

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot

BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LK98_ECTSI	8.090e-133	63.65	Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta...	[more]
D8LK26_ECTSI	6.910e-10	33.06	Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26...	[more]
A0A1J3IX16_NOCCA	6.260e-9	43.37	E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea ca...	[more]
A0A1J3GB03_NOCCA	1.090e-8	43.37	E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea ca...	[more]
A0A7N2KMI5_QUELO	2.260e-8	44.87	RING-type E3 ubiquitin transferase n=5 Tax=Fagacea...	[more]
A0A397ZSD3_BRACM	2.800e-8	45.45	Uncharacterized protein n=1 Tax=Brassica campestri...	[more]
A0A0D3B0Z0_BRAOL	3.890e-8	45.45	RING-type E3 ubiquitin transferase n=15 Tax=Brassi...	[more]
UPI00142E1CCD	3.890e-8	45.45	E3 ubiquitin-protein ligase KEG isoform X3 n=1 Tax...	[more]
A0A816I147_BRANA	3.890e-8	45.45	RING-type E3 ubiquitin transferase n=2 Tax=Brassic...	[more]
A0A200R767_9MAGN	3.900e-8	44.87	RING-type E3 ubiquitin transferase n=1 Tax=Macleay...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 497..517
None	No IPR available	PFAM	PF13857	Ank_5	coord: 780..834 e-value: 1.5E-8 score: 34.7
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 616..723 coord: 779..886
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 826..857 e-value: 4.0 score: 16.4 coord: 615..644 e-value: 4100.0 score: 0.5 coord: 681..710 e-value: 0.023 score: 23.8 coord: 793..822 e-value: 1.4E-4 score: 31.2 coord: 648..677 e-value: 5.0E-4 score: 29.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 793..825 score: 11.781
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 648..680 score: 12.129
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 681..713 score: 11.087
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 826..850 score: 8.95
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 621..711 e-value: 6.5E-14 score: 52.3
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 620..850 score: 43.768
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 737..884 e-value: 3.1E-20 score: 74.5
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 577..734 e-value: 4.0E-31 score: 109.7
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 620..882

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig14417	contig	H-elongata_contig14417:1078..7888 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig14417.3035.1	mRNA_H-elongata_contig14417.3035.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig14417 511..7954 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig14417.3035.1 ID=prot_H-elongata_contig14417.3035.1|Name=mRNA_H-elongata_contig14417.3035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=971bp
MAPAEQAEVEVHVVFPADLDDSRIGTPESGNRTKAPSGGSLGTKSGSTSL
LSLLSGSPRSLGTVHDTASGPPSPRSPLPELSAEGGEGAETGKGNNAVPS
AHPTPLSMFGGDTELPSDHPTPLSTMGSSQSKCGSRRKSKSKPAAAGSGT
TASKGAAEQPGKTKRGSGSETRGGKVVNPAASSFIQRLKYWSAGATEEKK
TRASSMASKSSTPKTVDAVVVENADTEGVANSPYRVSAHNIRTKQTTRAA
EAGPRGSADASVKRTPLESKHSTASSLAQSSPCCSEIGVKVVPFDTVTSD
AASVFFSGESQREGRAKPLPPPHQPWDQPQVEQLSKTALGAATSRHDVFC
SSRPAELTTLQRLAEDRISSGGGDEIVMEADLANRAAVEKEGKKDEDVES
DMDWDVLSDEEKEVEEKQEIVAPPPPPPLIEKPAEPAPPYSYSRGILPAP
DTVAPQQPPPPPRYMAIVESAIVTSALDLSSTSEHDTSPSEDDGGMMEIL
TDRLMEACNKIEQVTATPTDELSDGAPSIRRRGAGAPPSAMRRRQASNMS
SRALASSMLPTEVEEKFPDSDEEGIARDEGAAARKLRRERVKKRARAHSR
RKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRA
TPLMLASERGHTEMVEALLSSGADVCSVDENGNSALHLACFYSNTDVVVL
LLAVDVELTARDSEGRTPLDLASDPIIWRKLKREGFLRDSGENFDLLAAV
EGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHL
AAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPG
GFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADL
TDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLR
NLAARMDSIHRILSGGRRVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf