Homology
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)
HSP 1 Score: 439 bits (1128), Expect = 7.410e-131
Identity = 324/509 (63.65%), Postives = 377/509 (74.07%), Query Frame = 1
Query: 1453 RYMAIVESAIVTSALDLSSTSEH-DTSPSEDDGGMM-EILTDRLMEACNKIEQVTATPTDELSDGAPSIRRRGAGAP----PSAMRRRQASNMSSRALASSMLPTEVEEKFPDSDEEGIARDEGAAARKLRRERVKKRARAHSRRKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRATPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASDPIIWRKLKREGFLRDSGENFDLLAAVEGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADLTDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLRNLAARMDSIHRILSG 2961
RYMAIVE+A V SALD SSTSEH DTSPSEDDGGMM EILTDRLME C+K+EQ A+P +LSDGA G G PS RRRQ SNMS+R L S + E EE+ DSDE G D GAAARKLRRER++KRA+ RK++ L VP D++G+ I VH+AAY+G+ D++K+Y+SQGGDLE+RD F+AT LML +ER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLA+DP I R L+ E +R SGENFDLL AVE NDT A+ +FIAMGQ+ CG+P N AVA+A++RLRL+R GRGGM+AVHLAAFHGYAD+LR+LL +G+DPNAV DDGETPLHTAC GGS L CEK IA GRQ+MKHLLE KAFQATPA LL LRADL +VALQIDAEE+LFVRKGVAIKY+RKALKK++ D+ LA RM+S+H++L G
Sbjct: 662 RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMALGGGGVHKRRPS--RRRQLSNMSNRTLHS-VAGGEGEEEDADSDE-GSVMDAGAAARKLRRERLRKRAKQS--RKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXX--CEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKG 1162
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI)
HSP 1 Score: 73.9 bits (180), Expect = 6.740e-10
Identity = 121/366 (33.06%), Postives = 175/366 (47.81%), Query Frame = 1
Query: 1861 SRRKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRATPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASDPIIWRKLKREGFLRDSGENFDLLAAVEGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADLTDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLRNLAARMDSIHRILS 2958
S RK + T + + + H AAY G++ ++ Y GGDLE RD++RATPL+LA+E+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAS I L + +S D++ AVE ND L SFI+ D L+++G+ MT +H+A+F+G D +RMLL G P E+ Q LLE +++++ P + +R + L++D E +FV+K +AIK +R A++ +++++ L+ +M +I I++
Sbjct: 47 SSRKPGSSRTGRSKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKE--TESKLGVDVIEAVERNDVAGLKSFISGKGD-------------------LNQKGKNDMTPLHVASFNGRTDIVRMLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQ---LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMN 386
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A1J3IX16_NOCCA (E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IX16_NOCCA)
HSP 1 Score: 70.5 bits (171), Expect = 8.090e-9
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 2431 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 2679
R+G G A H+ ++HG D +R LL++GADPNAV D+GET LH A T CA ++L+ GG + ++AKG P +A
Sbjct: 170 REGSGPSVA-HICSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAVVILENGGSRSMAISNAKGLTPLHMCVA 251
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A1J3GB03_NOCCA (E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GB03_NOCCA)
HSP 1 Score: 70.5 bits (171), Expect = 1.420e-8
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 2431 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 2679
R+G G A H+ ++HG D +R LL++GADPNAV D+GET LH A T CA ++L+ GG + ++AKG P +A
Sbjct: 396 REGSGPSVA-HICSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAVVILENGGSRSMAISNAKGLTPLHMCVA 477
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A7N2KMI5_QUELO (RING-type E3 ubiquitin transferase n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2KMI5_QUELO)
HSP 1 Score: 70.1 bits (170), Expect = 2.970e-8
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 2446 GMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 2679
G + H+ A++G D +R LL++GADPNAV DDGET LH A + T CA ++L+ GG + A ++KG P IA
Sbjct: 567 GRSVAHVCAYYGQPDCMRELLLAGADPNAVDDDGETVLHIAVSKKFTDCAIVILENGGCKSMGALNSKGLTPLHLCIA 644
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A397ZSD3_BRACM (Uncharacterized protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397ZSD3_BRACM)
HSP 1 Score: 69.3 bits (168), Expect = 3.650e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 2431 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 2661
R+G G A H+ ++HG D +R LL++GADPNAV D+GET LH A T T CA ++L+ GG + ++ KG P
Sbjct: 566 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 641
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A0D3B0Z0_BRAOL (RING-type E3 ubiquitin transferase n=15 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3B0Z0_BRAOL)
HSP 1 Score: 69.3 bits (168), Expect = 5.090e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 2431 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 2661
R+G G A H+ ++HG D +R LL++GADPNAV D+GET LH A T T CA ++L+ GG + ++ KG P
Sbjct: 563 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 638
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
UPI00142E1CCD (E3 ubiquitin-protein ligase KEG isoform X3 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E1CCD)
HSP 1 Score: 69.3 bits (168), Expect = 5.090e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 2431 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 2661
R+G G A H+ ++HG D +R LL++GADPNAV D+GET LH A T T CA ++L+ GG + ++ KG P
Sbjct: 566 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 641
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A816I147_BRANA (RING-type E3 ubiquitin transferase n=2 Tax=Brassica TaxID=3705 RepID=A0A816I147_BRANA)
HSP 1 Score: 69.3 bits (168), Expect = 5.100e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 2431 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 2661
R+G G A H+ ++HG D +R LL++GADPNAV D+GET LH A T T CA ++L+ GG + ++ KG P
Sbjct: 564 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 639
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match:
A0A200R767_9MAGN (RING-type E3 ubiquitin transferase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R767_9MAGN)
HSP 1 Score: 69.3 bits (168), Expect = 5.110e-8
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 1
Query: 2446 GMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 2679
G T H+ A+HG D +R LLM+GADPNAV D+GET LH A T CA +L+ GG + + K P IA
Sbjct: 589 GPTVAHVCAYHGQPDCMRELLMAGADPNAVDDEGETVLHRAINKKYTACAVAILENGGCRSMGILNTKNLTPLHMCIA 666
The following BLAST results are available for this feature:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14417.3035.1
>prot_H-elongata_contig14417.3035.1 ID=prot_H-elongata_contig14417.3035.1|Name=mRNA_H-elongata_contig14417.3035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=971bp
MAPAEQAEVEVHVVFPADLDDSRIGTPESGNRTKAPSGGSLGTKSGSTSL
LSLLSGSPRSLGTVHDTASGPPSPRSPLPELSAEGGEGAETGKGNNAVPS
AHPTPLSMFGGDTELPSDHPTPLSTMGSSQSKCGSRRKSKSKPAAAGSGT
TASKGAAEQPGKTKRGSGSETRGGKVVNPAASSFIQRLKYWSAGATEEKK
TRASSMASKSSTPKTVDAVVVENADTEGVANSPYRVSAHNIRTKQTTRAA
EAGPRGSADASVKRTPLESKHSTASSLAQSSPCCSEIGVKVVPFDTVTSD
AASVFFSGESQREGRAKPLPPPHQPWDQPQVEQLSKTALGAATSRHDVFC
SSRPAELTTLQRLAEDRISSGGGDEIVMEADLANRAAVEKEGKKDEDVES
DMDWDVLSDEEKEVEEKQEIVAPPPPPPLIEKPAEPAPPYSYSRGILPAP
DTVAPQQPPPPPRYMAIVESAIVTSALDLSSTSEHDTSPSEDDGGMMEIL
TDRLMEACNKIEQVTATPTDELSDGAPSIRRRGAGAPPSAMRRRQASNMS
SRALASSMLPTEVEEKFPDSDEEGIARDEGAAARKLRRERVKKRARAHSR
RKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRA
TPLMLASERGHTEMVEALLSSGADVCSVDENGNSALHLACFYSNTDVVVL
LLAVDVELTARDSEGRTPLDLASDPIIWRKLKREGFLRDSGENFDLLAAV
EGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHL
AAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPG
GFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADL
TDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLR
NLAARMDSIHRILSGGRRVE*
back to topmRNA from alignment at H-elongata_contig14417:511..7954-
Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14417.3035.1 ID=mRNA_H-elongata_contig14417.3035.1|Name=mRNA_H-elongata_contig14417.3035.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7444bp|location=Sequence derived from alignment at H-elongata_contig14417:511..7954- (Himanthalia elongata Himel1 dioecious)
AGAGACGAAGCCCCGCCGGGGTTCTCCCCTCTCGGAGCAGGCAAGAAGTC
CTGTGGCCAGTATAACATGGCGCCCGCCGAGCAGGCGGAGGTGGAAGTCC
ACGTTGTCTTTCCCGCGGACTTGGACGACAGTCGCATTGGAACGCCTGAG
TCAGGCAACAGAACCAAGGCCCCGAGCGGAGGCAGTCTGGGCACCAAGTC
CGGTTCCACGTCGCTCCTCTCGTTGCTCTCGGGCTCCCCGCGTTCTCTCG
GGACAGTGCACGACACCGCGTCTGGGCCGCCGTCGCCACGGAGCCCGCTG
CCGGAACTCTCGGCGGAGGGGGGCGAGGGCGCGGAAACCGGCAAGGGCAA
CAACGCTGTTCCCTCTGCACATCCCACTCCCCTGTCGATGTTTGGCGGTG
ACACGGAGCTCCCATCCGACCACCCAACGCCGCTGTCGACCATGGGGTCC
TCCCAAAGCAAGTGCGGAAGCCGTCGGAAGAGCAAGTCGAAGCCGGCGGC
GGCGGGGTCGGGGACTACGGCATCAAAGGGGGCCGCCGAACAACCCGGAA
AGACGAAGCGTGGAAGCGGCAGTGAGACCCGCGGTGGAAAGGTGGTGAAC
CCCGCCGCGAGCTCCTTCATTCAGCGTCTCAAGTATTGGAGTGCGGGGGC
CACAGAAGAGAAAAAAACAAGGGCTTCATCCATGGCGTCTAAGTCATCGA
CACCGAAGACAGTTGACGCGGTCGTGGTTGAAAACGCGGACACGGAGGGT
GTGGCAAACTCACCGTATCGCGTTAGTGCTCACAATATACGCACGAAACA
AACGACAAGGGCGGCCGAGGCAGGTCCAAGGGGTAGCGCAGACGCCTCCG
TTAAAAGAACACCCCTCGAGTCGAAGCACTCAACCGCATCATCTCTTGCC
CAGAGTAGCCCGTGCTGCTCCGAAATCGGCGTGAAGGTGGTCCCATTCGA
CACGGTCACCTCGGACGCGGCGAGCGTATTCTTCAGTGGTGAATCTCAGC
GGGAGGGGAGAGCCAAGCCGCTTCCGCCGCCGCACCAGCCGTGGGACCAG
CCGCAGGTAGAACAACTATCGAAGACAGCCCTCGGCGCGGCGACCTCGCG
TCACGATGTATTTTGCTCGTCCCGCCCAGCCGAGCTGACGACGCTGCAGC
GATTGGCAGAGGATAGGATATCTTCCGGCGGTGGCGACGAGATCGTGATG
GAAGCCGATCTGGCCAATCGGGCCGCCGTGGAAAAAGAGGGTAAAAAGGA
CGAGGATGTGGAGTCTGATATGGACTGGGATGTTCTCTCTGACGAAGAGA
AAGAGGTGGAAGAGAAGCAGGAAATTGTTGCTCCCCCACCGCCGCCGCCA
CTGATCGAGAAGCCCGCCGAGCCCGCCCCGCCTTACTCGTACAGCCGCGG
GATATTACCCGCGCCGGATACCGTAGCGCCCCAGCAGCCACCCCCACCGC
CCCGCTACATGGCAATCGTTGAGTCGGCTATCGTGACCTCGGCGCTCGAT
CTTTCGTCCACCTCCGAGCACGACACCTCCCCCTCTGAGGACGACGGAGG
CATGATGGAAATCCTAACGGACCGTCTGATGGAGGCCTGCAACAAGATCG
AGCAGGTGACGGCAACCCCGACGGACGAGCTCAGCGATGGGGCGCCTAGC
ATCAGGCGGCGGGGGGCAGGGGCGCCGCCTTCGGCAATGCGGCGGAGACA
GGCGTCGAATATGTCGAGCCGCGCGTTCGGCAGGGACCAGGTGCGTGTGA
TTTGGCGTCGAGATCGGAACGGTCGAAGGATGTTGAGTGGTGGCGTTGGG
GAAAGTGGGGGGGAGACGAGGTGTGTCCCACCGATTGAAGCAGGCGGTCG
AGGTTGACTAGTCACCCGGTTTGTATTACAGTAATTCGCGTGCGTACGTT
GGTAAACTTGGACAGTTGGAGATCACACGGTTTACTTTTTCTTGGCACGG
TGCTAAAAATAAAATAAAATGTCTTTCATCGTCCGTCAAATAAGCGGGTG
GGTAAATGCTTTTTTGCTTCCAATGTCGAAAAGCATTCTAACCGATTTCT
CACGGCTTCGATTGACAGACTTCGCGGTGGCTGCAAAACGAACATTTCCC
ACCTCCCCTCTGATTTGCGCTCATATTATTATTATCAAAGTTTTCTTATC
CCTTCTTTTTATTAGTTTTTCTTATTTATTTTTTCTGAAAAAACGTATGT
ACTCAATTCAAACCTTGCCAACCATCCACACCTTCTTTACATCATGCGTG
AAATCCACGGGACCAACTATCGTCAGGTTCGAGTGTGTTGTATATTATTA
CTACCGTTTGAGAACAAATTTCCGGCTGGCGCCCGAGCCTCTCGTCGCGC
ACGTGAAAATAAAAAGTTCTCGATTCGATGATTTTCTGACAAAGGTCCAT
TTTCACCATGTTTCCACTCTCCGCAGCTCTTCTAAAACCCAACCAGCGTG
ATTGCTGAGATCACTTCCGATCATTTCCATCTCCCCCACCCACCCCCAAA
CACTTGCTCCGTCCTCCCGACGGCGCCTGAATATTTGCCTAACAGCTAAG
ACGTAAAAAAAAATGAAAATGCTCCCTCCCCTCGCCTGACCCAATCCCTG
ACTGCGGACCTCTTCCGCTATTTTTATGTGCATCTTATTCCCGCGTGCAG
AACGCCGGGGCGACCACCCGGTACGGACAGCATTCTTTCTTTTCGACGTC
GAGTCTGGCGTCGTCGATGCTGCCAACGGAGGTGGAAGAAAAGTTCCCCG
ACAGCGACGAAGAAGGCATCGCAAGAGACGAAGGCGCCGCGGCTCGCAAG
CTCCGGAGAGAACGGTGAGTGCACGTGCGCGCGTTAGTTACGTAAAGTGG
CGTGACTTGACTTGACGTGACCCCAACCTCGATACTTTTTTTTTTAACTT
CTGATTCGTGTTCATAATTTATTCCGGTGTGTTTAGTAACATGAGTGGGT
CTGAGTTTTTGTTGTCAAGGACACCCCTACGCGCGCATGCAATCTTTTGA
CTTAAATTTTGTTCGAGGGCTTGACAGGAGTACCTGAAAGAGACTCGTGG
CCACGTACTCCTTTGAGTGGTTGTTCCGAGGTTTTCTTGGGATCGGGGGG
GATCCGTGGCGAAACTCCACTGACGGAGACATAGGCAGTAACCTTCAAAG
CATTAACATTTTTTGCGCGGCATCGTAACTTTCCCTGTCACAACCCCCTT
TTCCCTTCTACCTTGTAAAACGCCTCTTTCATGATATAAAACTCTGGTCC
GGCGCGCCAGCGTAAAAAAGCGCGCGCGCGCTCACTCGCGAAGAAAACTG
GCTGGCGCATTGACCGTGCCTACGGACAACAAGGGCGATCCCATCGACGT
TCACTCGGCCGCCTACAGTGGAGAGGTCGACCTCGTCAAGTCCTACGTGT
CGCAGGGAGGTGACCTTGAGGTAAGTTGAATGGGAACGAGACGGTCCACT
CGTCCTTCTCATTTTTTGCCTTTCGCTCCGTGTCCCCTTGATAGACATGT
GCTTTACAGCATATATCCTATCTCCCGCCCCCTTTAGTCCTTGGCGCGCT
TTACGGTGAACCTTAATTGTTATTCGTAGTGATATTGTACGAGCCCGCGG
CAAATGTGTTGATGACCGCTCGAACTCAACCGCGCGCGCGAGAAAAAAAA
AACAGAAGTAGCGCAGCGGCGTTTGGTGAACGCTTTTGTTTTTTATTATT
GGTGACCGCTGATAACGGATCATTTTATTTTTGTAGTACTCATACTGTAT
GTCTTATCGTTTTAAATCATATACTATCGCGTTCCCTTAAACTCGCCGGC
TCTCCTCCCCGTCAGCCCCCACCTTCCCCTTAGGTGTACCGCCTACCGAT
GGGAACCCCTACTCGTAGTAAATTGGATTTTTAACGTATCCTCAAGGACG
CAAATCCTCTGGGTTTTGTAGATGATTCAATGCTAACGAGGACACACAAT
ATTTGTATTGGAAAAATAGTTTTAAAACCCCGTACATATTATTCCCACTG
TTTTTTACTCTGTTTGGGAGAAAATTGTCACGAAAGGGTGGAAGGGGCGC
TAACGAAAATGATTAAAACATCGCGCTAATTGATCACCGTGGTCTATATG
GTGTAAATGGATGTCACCTGTGTACCGTGTTCGGTCTCTATGCCAGGTTC
GTGACGCATTCCGGGCGACCCCTTTGATGCTAGCCTCGGAGCGTGGCCAT
ACCGAGATGGTCGAAGCCCTTCTCTCGTCCGGGGCGGATGTGTGTAGCGT
TGACGAGAACGGAAACAGCGCCCTCCACCTCGCGTGCTTCTACAGCAATA
CGGACGTGGTGGTTCTGCTTCTGGCCGTGGACGTGGAGCTCACGGTAGGT
TGCAACCGCACGCTTCTTTAGCGAAACTCTCTTTAGGAGGGCAATCGGCC
TAATGTATTTTGTGTCGCCATGCTTTCAGTTATTTTAGAAGTGCCATGTG
TGTGTGTGCGTTTGTTTATTTATTAAATTGCACACTACCGCGCAATCCGG
CTCCTGTCATGCTATATGAGCTCTTCTAGGCTACTCTCGCATTGACCCTC
CCAATGGGGGATTGGATCATATTTGCTACAAAAACATCGGATCAGTGTGT
GTATTTGTGAAGAAAGAGAGAGAAAGATAGTTTTCTTAGCTCGTGAGTCC
TCTTCCTTGCTCTCTTTAGGGGACCTAGCTAGGGGTAAAGCCTTGAGTGT
TGTCGCTTTCGTTTCTTCTGACGAAGCGATGATACGATCATAGGCTTGCG
TGCACTCCCCTCGTGGAGAGACGCACTGTCAAATCGCTCGAGGTGATCCT
TGGCAAACGCGAGGGATGCTATATCATAGTTTGTGATCTTCCCCTTTCCT
CCCTATCTCCCGGAAAAAAAAAATCATAACATGACCTGCTTTCCACTCTC
TCTCTCTATATATATATATATTGTCTAGGCCCGTGACTCAGAGGGGAGGA
CGCCGCTAGATCTCGCCTCCGATCCGATCATCTGGCGCAAGTTGAAGAGG
GAGGGATTCTTGCGAGACTCCGGGGAGAACTTCGACCTCCTGGCCGCGGT
GGAGGGGAACGACACCCACGCCCTCGGTAGCTTCATCGCGATGGGGCAGG
ACGTCTGCGGCTTCCCGGGGAACTCCGCGGCTGTAGCCCTCGCCGCGCGG
CGCCTGCGCCTCGACAGGCAGGGCCGCGGTGGCATGACAGCGGTGCACCT
CGCCGCCTTCCACGGCTACGCGGACGCGCTCCGGATGCTGCTGATGAGCG
GTGCAGACCCTAACGCGGTTTGCGACGATGGGGAGACACCGTTACACACT
GCCTGCACAGGGGGGAGCACACTGTGCGCCACGCTTCTCCTTGATCCCGG
GGGGTTTGGTGGCTTATAAAGGGGGGGGGGGGGATAAAAGGGGAGGCATT
TTCGGCAATTGTGTGATGTTCGGTGTTCGGATTGGCTGTATAGTATAGTG
CAGTATAGTATATTATAATATAGTATAGTATAATGCAGTATGATTTAGTA
TATTATATTATAGTATAGTACTGAAAGGTGATCGTATGAGTAGAGTGGAA
GGGGTCAAGTTGGTTTGTTCGCTCTCGTATTTTTTGTTCATATGATTCCG
GTATTATAGGTTAAACAAGCTCAAAGGTAGTAATGTACACACTCGAACTC
GACGATAGTTGGTCCCCTGGATGGTACACACCTCTCACGGCGCTAAGAAG
GGTGGATGTTCGGAGGGTTGGAATGCGAGTTCAAGTTTTTTTTAATAATA
ATAAAAAGAGAGGTAAGAGAGAAAAAAAGAGAGAAATAAACACGATACAG
CATGTAATAGGTGGGTCACCACGGCACCGATGTTTTTCTCCCGCGATGTG
TTTTTTTAACAAATCTGTGTTCGAAGCGGAATAGCAGTGCCCACCAACAT
CACCGTATTTCCCGATTCTATTTCTAACCAATTGACGCCCCCCGAAGGAG
TTTTTACACCATACCGTGCAATAGAGGATTTTGTCGATGACCTCACGCAT
GGTGCGTTTTTATGTATTAATATGTGTGTCAGGAGCCAATCCTCTAGCCA
CCGACGCGAAGGGGTTCGTGCCCTGCGAGAAGCAAATTGCAGAGGGTCGA
CAAGATATGAAACATCTCTTGGAGACGAAGGCTTTCCAAGGTGCGTTACT
CTGGTGGTCGGAGAGGGTAGAATAGCAGTGTCCAAAAAAGGTGTTCCCAG
CCTTGATATTTTCTCTAAACCCCTATGGAACTCGATCTGTTTTTTATATA
TTAAATTCAATATAAAAATCGAAATTCAGTTCCAAAAGGGTTTAAAAAAA
ACTGAACTCATTCGGTGATTTCGGTTTAAAACCCCCCCCGTATTTTACCT
ACCGTAGCTTTTTGTTTTTCTACTCCCGCATATAATGCTATTTTAAGTTT
TTTAATAACCATATATATATTATTTACAGGATGCCGTTGCTATCCCTTCC
TCGATATTTGATTTAAGTATAGATGCATGCAGATAACAGATGAAACGGAG
ACCATTCGCCATTCGCCTCGTCGTATCATGTGGCTATTTTGTTTCTCGCT
TTCTCTTGTTATTTATATACCATAGTTGTGGATTTGTTCATACATCTAAA
TATTATGTATGTATGTTGTGGCGCAGCTACTCCGGCCACTCTATTGGGGC
TCAGGGCTGACCTTACCGACGTGGCGCTCCAAATTGACGCCGAAGAGGAA
CTCTTCGTGCGCAAAGGCGTGGCCATCAAGTATATCCGAAAGGCGCTCAA
GAAGAGGGAGGCCGACGTTGCGAGGTTGCGCAATACCGTAGACGCGAGAG
ACGCGGATCTCCGGAACCTCGCCGCCCGGATGGACAGCATTCATCGGATT
CTCTCCGGCGGTCGCCGCGTCGAATGAAGCGCGAGACGGAAGAATAAAAA
CATCCGCACCTCCGGCTCTGGTTCCGGCTCCGCCTCTCGAGTGTTCCCTC
GACTAGGTCTCTTCTTCTCTCTTGCCGCTCGCGCTACTCGCGTTCTGATT
TTATGCATCTTTTCCCCCCCCAATCACTGCGGCGTTGGGTTTTGTTTTGT
TATATTCTCGCTGTCGCGCGCGCGCACGCGTTGCCGATTGCGATGTGCGA
CTGCGCCAGTGCGTATGTTTTGGTCGCGTGCAGAGGCGTGATTACTTCCT
CGCGAGAGGAGTGCCGTCGGCCGTGGTAGTCGGCAGTTGTTGCGCATCTC
CCCACTCAACCTTGCGGCGCCCGCTTATTGACTTCCGTCTCCATACTGTG
CACGATAGCTGTTGCTGTTGCTGTTGCTGTCATCTTAGAGCGGCCAATTT
TGTCGAGATGGAGGAAGTATTTAGTATGAAGACGGGGGGATACCCGAGAC
GGTAAAGGGGGGAAAGGAGAGATGGTAGGAGAAAAGGGAAGTTGCTCGCC
GGGCATTGACGAGGTGGAAATTCGAGGCCACCGGCGAATGTAAG
back to topCoding sequence (CDS) from alignment at H-elongata_contig14417:511..7954-
>mRNA_H-elongata_contig14417.3035.1 ID=mRNA_H-elongata_contig14417.3035.1|Name=mRNA_H-elongata_contig14417.3035.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5826bp|location=Sequence derived from alignment at H-elongata_contig14417:511..7954- (Himanthalia elongata Himel1 dioecious)
ATGGCGCCCGCCGAGCAGGCGGAGGTGGAAGTCCACGTTGTCTTTCCCGC
GGACTTGGACGACAGTCGCATTGGAACGCCTGAGTCAGGCAACAGAACCA
AGGCCCCGAGCGGAGGCAGTCTGGGCACCAAGTCCGGTTCCACGTCGCTC
CTCTCGTTGCTCTCGGGCTCCCCGCGTTCTCTCGGGACAGTGCACGACAC
CGCGTCTGGGCCGCCGTCGCCACGGAGCCCGCTGCCGGAACTCTCGGCGG
AGGGGGGCGAGGGCGCGGAAACCGGCAAGGGCAACAACGCTGTTCCCTCT
GCACATCCCACTCCCCTGTCGATGTTTGGCGGTGACACGGAGCTCCCATC
CGACCACCCAACGCCGCTGTCGACCATGGGGTCCTCCCAAAGCAAGTGCG
GAAGCCGTCGGAAGAGCAAGTCGAAGCCGGCGGCGGCGGGGTCGGGGACT
ACGGCATCAAAGGGGGCCGCCGAACAACCCGGAAAGACGAAGCGTGGAAG
CGGCAGTGAGACCCGCGGTGGAAAGGTGGTGAACCCCGCCGCGAGCTCCT
TCATTCAGCGTCTCAAGTATTGGAGTGCGGGGGCCACAGAAGAGAAAAAA
ACAAGGGCTTCATCCATGGCGTCTAAGTCATCGACACCGAAGACAGTTGA
CGCGGTCGTGGTTGAAAACGCGGACACGGAGGGTGTGGCAAACTCACCGT
ATCGCGTTAGTGCTCACAATATACGCACGAAACAAACGACAAGGGCGGCC
GAGGCAGGTCCAAGGGGTAGCGCAGACGCCTCCGTTAAAAGAACACCCCT
CGAGTCGAAGCACTCAACCGCATCATCTCTTGCCCAGAGTAGCCCGTGCT
GCTCCGAAATCGGCGTGAAGGTGGTCCCATTCGACACGGTCACCTCGGAC
GCGGCGAGCGTATTCTTCAGTGGTGAATCTCAGCGGGAGGGGAGAGCCAA
GCCGCTTCCGCCGCCGCACCAGCCGTGGGACCAGCCGCAGGTAGAACAAC
TATCGAAGACAGCCCTCGGCGCGGCGACCTCGCGTCACGATGTATTTTGC
TCGTCCCGCCCAGCCGAGCTGACGACGCTGCAGCGATTGGCAGAGGATAG
GATATCTTCCGGCGGTGGCGACGAGATCGTGATGGAAGCCGATCTGGCCA
ATCGGGCCGCCGTGGAAAAAGAGGGTAAAAAGGACGAGGATGTGGAGTCT
GATATGGACTGGGATGTTCTCTCTGACGAAGAGAAAGAGGTGGAAGAGAA
GCAGGAAATTGTTGCTCCCCCACCGCCGCCGCCACTGATCGAGAAGCCCG
CCGAGCCCGCCCCGCCTTACTCGTACAGCCGCGGGATATTACCCGCGCCG
GATACCGTAGCGCCCCAGCAGCCACCCCCACCGCCCCGCTACATGGCAAT
CGTTGAGTCGGCTATCGTGACCTCGGCGCTCGATCTTTCGTCCACCTCCG
AGCACGACACCTCCCCCTCTGAGGACGACGGAGGCATGATGGAAATCCTA
ACGGACCGTCTGATGGAGGCCTGCAACAAGATCGAGCAGGTGACGGCAAC
CCCGACGGACGAGCTCAGCGATGGGGCGCCTAGCATCAGGCGGCGGGGGG
CAGGGGCGCCGCCTTCGGCAATGCGGCGGAGACAGGCGTCGAATATGTCG
AGCCGCGCATGGCGCCCGCCGAGCAGGCGGAGGTGGAAGTCCACGTTGTC
TTTCCCGCGGACTTGGACGACAGTCGCATTGGAACGCCTGAGTCAGGCAA
CAGAACCAAGGCCCCGAGCGGAGGCAGTCTGGGCACCAAGTCCGGTTCCA
CGTCGCTCCTCTCGTTGCTCTCGGGCTCCCCGCGTTCTCTCGGGACAGTG
CACGACACCGCGTCTGGGCCGCCGTCGCCACGGAGCCCGCTGCCGGAACT
CTCGGCGGAGGGGGGCGAGGGCGCGGAAACCGGCAAGGGCAACAACGCTG
TTCCCTCTGCACATCCCACTCCCCTGTCGATGTTTGGCGGTGACACGGAG
CTCCCATCCGACCACCCAACGCCGCTGTCGACCATGGGGTCCTCCCAAAG
CAAGTGCGGAAGCCGTCGGAAGAGCAAGTCGAAGCCGGCGGCGGCGGGGT
CGGGGACTACGGCATCAAAGGGGGCCGCCGAACAACCCGGAAAGACGAAG
CGTGGAAGCGGCAGTGAGACCCGCGGTGGAAAGGTGGTGAACCCCGCCGC
GAGCTCCTTCATTCAGCGTCTCAAGTATTGGAGTGCGGGGGCCACAGAAG
AGAAAAAAACAAGGGCTTCATCCATGGCGTCTAAGTCATCGACACCGAAG
ACAGTTGACGCGGTCGTGGTTGAAAACGCGGACACGGAGGGTGTGGCAAA
CTCACCGTATCGCGTTAGTGCTCACAATATACGCACGAAACAAACGACAA
GGGCGGCCGAGGCAGGTCCAAGGGGTAGCGCAGACGCCTCCGTTAAAAGA
ACACCCCTCGAGTCGAAGCACTCAACCGCATCATCTCTTGCCCAGAGTAG
CCCGTGCTGCTCCGAAATCGGCGTGAAGGTGGTCCCATTCGACACGGTCA
CCTCGGACGCGGCGAGCGTATTCTTCAGTGGTGAATCTCAGCGGGAGGGG
AGAGCCAAGCCGCTTCCGCCGCCGCACCAGCCGTGGGACCAGCCGCAGGT
AGAACAACTATCGAAGACAGCCCTCGGCGCGGCGACCTCGCGTCACGATG
TATTTTGCTCGTCCCGCCCAGCCGAGCTGACGACGCTGCAGCGATTGGCA
GAGGATAGGATATCTTCCGGCGGTGGCGACGAGATCGTGATGGAAGCCGA
TCTGGCCAATCGGGCCGCCGTGGAAAAAGAGGGTAAAAAGGACGAGGATG
TGGAGTCTGATATGGACTGGGATGTTCTCTCTGACGAAGAGAAAGAGGTG
GAAGAGAAGCAGGAAATTGTTGCTCCCCCACCGCCGCCGCCACTGATCGA
GAAGCCCGCCGAGCCCGCCCCGCCTTACTCGTACAGCCGCGGGATATTAC
CCGCGCCGGATACCGTAGCGCCCCAGCAGCCACCCCCACCGCCCCGCTAC
ATGGCAATCGTTGAGTCGGCTATCGTGACCTCGGCGCTCGATCTTTCGTC
CACCTCCGAGCACGACACCTCCCCCTCTGAGGACGACGGAGGCATGATGG
AAATCCTAACGGACCGTCTGATGGAGGCCTGCAACAAGATCGAGCAGGTG
ACGGCAACCCCGACGGACGAGCTCAGCGATGGGGCGCCTAGCATCAGGCG
GCGGGGGGCAGGGGCGCCGCCTTCGGCAATGCGGCGGAGACAGGCGTCGA
ATATGTCGAGCCGCGCTCTGGCGTCGTCGATGCTGCCAACGGAGGTGGAA
GAAAAGTTCCCCGACAGCGACGAAGAAGGCATCGCAAGAGACGAAGGCGC
CGCGGCTCGCAAGCTCCGGAGAGAACGTCTGGCGTCGTCGATGCTGCCAA
CGGAGGTGGAAGAAAAGTTCCCCGACAGCGACGAAGAAGGCATCGCAAGA
GACGAAGGCGCCGCGGCTCGCAAGCTCCGGAGAGAACGCGTAAAAAAGCG
CGCGCGCGCTCACTCGCGAAGAAAACTGGCTGGCGCATTGACCGTGCCTA
CGGACAACAAGGGCGATCCCATCGACGTTCACTCGGCCGCCTACAGTGGA
GAGGTCGACCTCGTCAAGTCCTACGTGTCGCAGGGAGGTGACCTTGAGCG
TAAAAAAGCGCGCGCGCGCTCACTCGCGAAGAAAACTGGCTGGCGCATTG
ACCGTGCCTACGGACAACAAGGGCGATCCCATCGACGTTCACTCGGCCGC
CTACAGTGGAGAGGTCGACCTCGTCAAGTCCTACGTGTCGCAGGGAGGTG
ACCTTGAGGTTCGTGACGCATTCCGGGCGACCCCTTTGATGCTAGCCTCG
GAGCGTGGCCATACCGAGATGGTCGAAGCCCTTCTCTCGTCCGGGGCGGA
TGTGTGTAGCGTTGACGAGAACGGAAACAGCGCCCTCCACCTCGCGTGCT
TCTACAGCAATACGGACGTGGTGGTTCTGCTTCTGGCCGTGGACGTGGAG
CTCACGGTTCGTGACGCATTCCGGGCGACCCCTTTGATGCTAGCCTCGGA
GCGTGGCCATACCGAGATGGTCGAAGCCCTTCTCTCGTCCGGGGCGGATG
TGTGTAGCGTTGACGAGAACGGAAACAGCGCCCTCCACCTCGCGTGCTTC
TACAGCAATACGGACGTGGTGGTTCTGCTTCTGGCCGTGGACGTGGAGCT
CACGGCCCGTGACTCAGAGGGGAGGACGCCGCTAGATCTCGCCTCCGATC
CGATCATCTGGCGCAAGTTGAAGAGGGAGGGATTCTTGCGAGACTCCGGG
GAGAACTTCGACCTCCTGGCCGCGGTGGAGGGGAACGACACCCACGCCCT
CGGTAGCTTCATCGCGATGGGGCAGGACGTCTGCGGCTTCCCGGGGAACT
CCGCGGCTGTAGCCCTCGCCGCGCGGCGCCTGCGCCTCGACAGGCAGGGC
CGCGGTGGCATGACAGCGGTGCACCTCGCCGCCTTCCACGGCTACGCGGA
CGCGCTCCGGATGCTGCTGATGAGCGGTGCAGACCCTAACGCGGTTTGCG
ACGATGGGGAGACACCGTTACACACTGCCTGCACAGGGGGGAGCACACTG
TGCGCCACGCTTCTCCTTGATCCCGGGGGGTTTGGCCCGTGACTCAGAGG
GGAGGACGCCGCTAGATCTCGCCTCCGATCCGATCATCTGGCGCAAGTTG
AAGAGGGAGGGATTCTTGCGAGACTCCGGGGAGAACTTCGACCTCCTGGC
CGCGGTGGAGGGGAACGACACCCACGCCCTCGGTAGCTTCATCGCGATGG
GGCAGGACGTCTGCGGCTTCCCGGGGAACTCCGCGGCTGTAGCCCTCGCC
GCGCGGCGCCTGCGCCTCGACAGGCAGGGCCGCGGTGGCATGACAGCGGT
GCACCTCGCCGCCTTCCACGGCTACGCGGACGCGCTCCGGATGCTGCTGA
TGAGCGGTGCAGACCCTAACGCGGTTTGCGACGATGGGGAGACACCGTTA
CACACTGCCTGCACAGGGGGGAGCACACTGTGCGCCACGCTTCTCCTTGA
TCCCGGGGGGTTTGCCAATCCTCTAGCCACCGACGCGAAGGGGTTCGTGC
CCTGCGAGAAGCAAATTGCAGAGGGTCGACAAGATATGAAACATCTCTTG
GAGACGAAGGCTTTCCAAGCCAATCCTCTAGCCACCGACGCGAAGGGGTT
CGTGCCCTGCGAGAAGCAAATTGCAGAGGGTCGACAAGATATGAAACATC
TCTTGGAGACGAAGGCTTTCCAAGCTACTCCGGCCACTCTATTGGGGCTC
AGGGCTGACCTTACCGACGTGGCGCTCCAAATTGACGCCGAAGAGGAACT
CTTCGTGCGCAAAGGCGTGGCCATCAAGTATATCCGAAAGGCGCTCAAGA
AGAGGGAGGCCGACGTTGCGAGGTTGCGCAATACCGTAGACGCGAGAGAC
GCGGATCTCCGGAACCTCGCCGCCCGGATGGACAGCATTCATCGGATTCT
CTCCGGCGGTCGCCGCGTCGAATGACTACTCCGGCCACTCTATTGGGGCT
CAGGGCTGACCTTACCGACGTGGCGCTCCAAATTGACGCCGAAGAGGAAC
TCTTCGTGCGCAAAGGCGTGGCCATCAAGTATATCCGAAAGGCGCTCAAG
AAGAGGGAGGCCGACGTTGCGAGGTTGCGCAATACCGTAGACGCGAGAGA
CGCGGATCTCCGGAACCTCGCCGCCCGGATGGACAGCATTCATCGGATTC
TCTCCGGCGGTCGCCGCGTCGAATGA
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