prot_H-elongata_contig14402.3025.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14402.3025.1
Unique Nameprot_H-elongata_contig14402.3025.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length288
Homology
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: D7FSF4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF4_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 8.780e-140
Identity = 215/283 (75.97%), Postives = 251/283 (88.69%), Query Frame = 0
Query:    1 EVPAGLFSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLP-NKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPDHKVIVFFVAARIVQVGSNL 282
            E+  G F+DLDL ++THAAISDV+GY +MTKVQEQSIPVC+TGVDVLAKAKTGTGKT+AFLIPAIERAA    G GK     G+SA++ISPTRELAQQIAVEAQQ+MSFHRLKLMCSVGG NVNRDLNQL SGAPDI+VATPGRL+DL+ENHG+GR  + LDTL+FDEADQLLEMGFRP+IE ILR+L  +K  RQTL+FSATMPGDVQA+AS+A++  Y+VVDCVGE+E+THQHV QKFAVVP AE +PRLLAT+L+A+EDPDHK+IVFFVAARIVQ+ + L
Sbjct:  103 EITTGQFNDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAA--KRGFGK-----GVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLVFDEADQLLEMGFRPAIENILRNLQASKTYRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARIVQLHAEL 378          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A6H5JHU6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU6_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 1.090e-137
Identity = 213/279 (76.34%), Postives = 247/279 (88.53%), Query Frame = 0
Query:    1 EVPAGLFSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQ--VMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLP-NKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPDHKVIVFFVAARIV 276
            E+  G FSD++L ++THAAISDV+GY +MTKVQEQSIPVC+TGVDVLAKAKTGTGKT+AFLIPAIERAA    G GK     G+SA++ISPTRELAQQIAVEAQQ  +MSFHRLKLMCSVGG NVNRDLNQL SGAPDI+VATPGRL+DLLENHG+GR  + LDTLIFDEADQLLEMGFRP+IE ILR+L  +K  RQTL+FSATMPGDVQA+AS+A++  Y+VVDCVGE+E+THQHV QKFAVVP AE +PRLLAT+L+A+EDPDHK+IVFFVAARI+
Sbjct:   41 EITTGQFSDVNLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAA--KRGFGK-----GVSALIISPTRELAQQIAVEAQQACIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLLENHGLGRSMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARIL 312          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 5.360e-87
Identity = 154/280 (55.00%), Postives = 194/280 (69.29%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLE--AREDPDHKVIVFFVAARIVQVGSNLAS 284
            F+ L L   T  AI++V+GY ++TKVQ  SIP  + G DVLAKAKTGTGKTL+FL+PAIE  A       +A R  GIS ++ISPTRELAQQIA EA QV++FH + L+C VGGTN+  D+       PDI+VATPGRL D L+N+G+ +    L  LIFDEADQLLEMGFRP+IE ILR +P+  DRQTLLFSATMPGDV+ +A LAL+  Y+ VDCVGE+E THQHV Q++ V    + +  L   L E  A +   HK+IVFF  AR+ Q  + L +
Sbjct:   46 FAQLPLSAPTQRAIAEVLGYVTLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLLPAIEGVARTP----RAQRK-GISVLIISPTRELAQQIADEANQVLTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCN 319          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 3.460e-85
Identity = 153/280 (54.64%), Postives = 192/280 (68.57%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLE--AREDPDHKVIVFFVAARIVQVGSNLAS 284
            F+ L L   T  AI++V+GY ++TKVQ  SIP  + G DVLAKAKTGTGKTL+FL PAIE  A       +A R  GI  ++ISPTRELAQQIA EA QV++FH + L+C VGGTN+  D+       PDI+VATPGRL D L+N+G+ +    L  LIFDEADQLLEMGFRP+IE ILR +P+  DRQTLLFSATMPGDV+ +A LAL+  Y+ VDCVGE+E THQHV Q++ V    + +  L   L E  A +   HK+IVFF  AR+ Q  + L +
Sbjct:  146 FAQLPLSAPTQRAIAEVLGYATLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLFPAIEGVARTP----RAQRK-GIWVLIISPTRELAQQIADEANQVLTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCN 419          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA)

HSP 1 Score: 270 bits (689), Expect = 3.320e-84
Identity = 147/280 (52.50%), Postives = 185/280 (66.07%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPD--HKVIVFFVAARIVQVGSNLAS 284
            F  L ++      I+  MGY +MTKVQ  +IPV +TGVD+LAKAKTGTGKTLAFLIP +ERA  +        R  GIS ++ISPTRELAQQI  EA     F  ++L C  GGTN+  DL +L+   PDILVATPGRL D LEN  + R    L  L+ DEADQLLEMGFRP+IE  LR+LP  + RQTLLFSATMP DV+A++ +A+R ++++VD VGE+E TH+HV Q   V      +P+LL  L  A  D D  HK+IVFF  AR+ Q  + L +
Sbjct:    6 FESLPINADLKRGITQAMGYETMTKVQSATIPVSLTGVDILAKAKTGTGKTLAFLIPCVERALRSP------RRAGGISVLIISPTRELAQQIHDEAALATRFMGMRLQCIFGGTNIKADLRKLSDATPDILVATPGRLNDHLENQTLARQLAGLSALVLDEADQLLEMGFRPAIEAALRNLPPPSARQTLLFSATMPQDVRAISRIAMRPDFELVDTVGEEESTHEHVPQSAVVTTMEHGVPQLLLLLRRAVHDADGAHKIIVFFTTARLTQFHAELCN 279          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A7S3XXC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXC6_HETAK)

HSP 1 Score: 265 bits (677), Expect = 9.430e-83
Identity = 149/272 (54.78%), Postives = 182/272 (66.91%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENH-GVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPDHKVIVFFVAARIVQ 277
            F+D  L   T  A+++V+GY  MT+VQ Q++PV + G DVLAKAKTGTGKTL FL+PAIER  AA A    A R   +SA+VISPTRELAQQIA EA+Q++ FH L L    GGT + +D++      PDILVATPGRL+D LEN  G       L  LI DE DQLL+MGFRPSI KIL+ LP K+ RQTLLFSATMP DVQ MA   L   Y++VDCVG++  THQ V Q F V    + +  L   + E R+ P HK+IVFF  AR+ Q
Sbjct:  103 FADAPLAVGTQRALAEVLGYERMTRVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPAIERILAAPA----AARRGRVSALVISPTRELAQQIAEEAKQLLKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPPKSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQTFLVCSVEDQLGELAQIIAEGRQVPGHKLIVFFTTARLTQ 370          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A7S4D8Q7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Q7_HETAK)

HSP 1 Score: 265 bits (677), Expect = 1.560e-81
Identity = 149/272 (54.78%), Postives = 182/272 (66.91%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENH-GVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPDHKVIVFFVAARIVQ 277
            F+D  L   T  A+++V+GY  MT+VQ Q++PV + G DVLAKAKTGTGKTL FL+PAIER  AA A    A R   +SA+VISPTRELAQQIA EA+Q++ FH L L    GGT + +D++      PDILVATPGRL+D LEN  G       L  LI DE DQLL+MGFRPSI KIL+ LP K+ RQTLLFSATMP DVQ MA   L   Y++VDCVG++  THQ V Q F V    + +  L   + E R+ P HK+IVFF  AR+ Q
Sbjct:   23 FADAPLAVGTQRALAEVLGYERMTRVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPAIERILAAPA----AARRGRVSALVISPTRELAQQIAEEAKQLLKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPPKSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQTFLVCSVEDQLGELAQIIAEGRQVPGHKLIVFFTTARLTQ 290          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A7S0YY46_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0YY46_9CRYP)

HSP 1 Score: 262 bits (670), Expect = 5.010e-81
Identity = 148/285 (51.93%), Postives = 191/285 (67.02%), Query Frame = 0
Query:    1 EVPAGLFSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHR-LKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRN--EYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPDHKVIVFFVAARIVQVGSNL 282
            ++    F +L +H  T  +I++VM Y +MT VQ+QSIPV +TGVD+LAKAKTGTGKTL+FLIPA+E          +     GIS ++ISPTRELAQQI  EA+ V+  HR + +MC VGGTN+NRD+ Q     P +LVATPGRL D LEN G+ +L   L  LIFDEADQLL+MGFRP+I  +L+ LP K+ RQTLLFSATMP DV+ +A LA+R+   +  VD VG +E+THQHV Q + V     L P L+  + E    P +K+I FF  AR  Q+ S L
Sbjct:   37 QMTTSAFDELQVHPLTKKSIAEVMRYQTMTIVQQQSIPVALTGVDLLAKAKTGTGKTLSFLIPAVEHVI-------RDPPVRGISVLIISPTRELAQQIEEEAKMVVQMHRTITVMCIVGGTNMNRDI-QGFKRPPSLLVATPGRLNDHLENSGLAQLCSQLRCLIFDEADQLLDMGFRPAILTMLKFLPPKDTRQTLLFSATMPKDVKTIADLAMRSAQNFAYVDTVGAEENTHQHVEQTYVVASKQGLAPELVTLVREGMMTPGYKIIAFFPTARQTQLYSEL 313          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A5J4YBS8_9CHLO (DEAD box helicase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBS8_9CHLO)

HSP 1 Score: 262 bits (669), Expect = 4.400e-80
Identity = 140/281 (49.82%), Postives = 193/281 (68.68%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQ--HVSQKFAVVPSAELMPRLLATLLEAR-EDPDHKVIVFFVAARIVQVGSNLAS 284
            F+DL +  +T  A+++V+ Y   T VQ QS+P  + GVD++ KAKTGTGKTLAFLIPA+ER A  T+G         IS +VISPTRELA QIAVEA+ +  FH + + C VGGTN++ ++ ++    P ILVATPGRLVD L+N    +    L+TL+FDEAD+LL+MGFRP +EKILR+LPNK+ RQTLLFSAT P D+Q +A  ALR  ++++D VGED  TH    V Q   +VP  ++  +L+  L + R  DP+HKV+VFF  A++ Q+ + + +
Sbjct:  113 FADLPICSATKRALAEVLKYDLCTTVQAQSVPPSLQGVDMVCKAKTGTGKTLAFLIPALERMAGKTSGK--------ISTLVISPTRELASQIAVEAEALGRFHDITVQCVVGGTNIDSEIKKIKRSTPHILVATPGRLVDHLQNRDAAQFMTKLETLVFDEADRLLDMGFRPDVEKILRTLPNKSTRQTLLFSATFPQDIQELAKFALRPGFQLIDTVGEDS-THSSSQVQQSVMLVPMEQMAAQLIHILADHRASDPNHKVLVFFTTAKLTQLYAEMCN 384          
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Match: A0A7S3XX82_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX82_HETAK)

HSP 1 Score: 264 bits (674), Expect = 6.170e-80
Identity = 146/278 (52.52%), Postives = 184/278 (66.19%), Query Frame = 0
Query:    7 FSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKAKTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIAVEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLENHGVG--RLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFSATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPRLLATLLEAREDPDHKVIVFFVAARIVQVGSNL 282
            F+DL LH  T  A+ +V+GY+ MT VQ Q++PV + G DVLAKAKTGTGKTL FL+P IE+  AA A    A R   +SA+VISPTRELAQQIA EA+Q++ FH L L   VGGT +++D   L    PDI+VATPGRL  LL+    G       L  L+ DE DQLL+MGFRPSI +ILR LP K  RQ+LLFSAT+P DVQ +A L L+  Y++VDCVGE+E TH+HV Q   V      +  L   + E R+ P HK+IVFF  AR+ Q  + +
Sbjct:  139 FTDLQLHAGTKRALKEVLGYSDMTHVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPTIEQVLAAPA----AARRGRVSALVISPTRELAQQIAEEAKQLLKFHDLGLQTVVGGTKMSKDAAALRRRTPDIVVATPGRLEALLDEDTAGFRGACAGLRVLVMDECDQLLDMGFRPSILRILRGLPPKAGRQSLLFSATLPRDVQEIAGLGLKPSYELVDCVGEEESTHRHVPQSVLVCSMETQLAELAQIVEEGRQVPGHKIIVFFTTARLTQFYAEI 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14402.3025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF4_ECTSI8.780e-14075.97DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JHU6_9PHAE1.090e-13776.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L2V2_9PHAE5.360e-8755.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB6_ECTSI3.460e-8554.64DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDJ4_9STRA3.320e-8452.50P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3XXC6_HETAK9.430e-8354.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D8Q7_HETAK1.560e-8154.78Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0YY46_9CRYP5.010e-8151.93Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A5J4YBS8_9CHLO4.400e-8049.82DEAD box helicase n=1 Tax=Trebouxia sp. A1-2 TaxID... [more]
A0A7S3XX82_HETAK6.170e-8052.52Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 25..238
e-value: 3.6E-50
score: 182.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 37..221
score: 28.604
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 30..208
e-value: 2.6E-45
score: 154.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1..223
e-value: 7.7E-69
score: 233.7
NoneNo IPR availablePANTHERPTHR24031:SF384DEAD-BOX ATP-DEPENDENT RNA HELICASE 31coord: 20..280
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 20..280
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 5..34
score: 8.474
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14402contigH-elongata_contig14402:374..3589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14402.3025.1mRNA_H-elongata_contig14402.3025.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14402 374..3589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14402.3025.1 ID=prot_H-elongata_contig14402.3025.1|Name=mRNA_H-elongata_contig14402.3025.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
EVPAGLFSDLDLHRSTHAAISDVMGYTSMTKVQEQSIPVCITGVDVLAKA
KTGTGKTLAFLIPAIERAAAATAGGGKANRFAGISAVVISPTRELAQQIA
VEAQQVMSFHRLKLMCSVGGTNVNRDLNQLASGAPDILVATPGRLVDLLE
NHGVGRLTKTLDTLIFDEADQLLEMGFRPSIEKILRSLPNKNDRQTLLFS
ATMPGDVQAMASLALRNEYKVVDCVGEDEDTHQHVSQKFAVVPSAELMPR
LLATLLEAREDPDHKVIVFFVAARIVQVGSNLASPCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase