prot_H-elongata_contig142820.2962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142820.2962.1
Unique Nameprot_H-elongata_contig142820.2962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length237
Homology
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.990e-41
Identity = 103/253 (40.71%), Postives = 146/253 (57.71%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR +G+ ++     GYV+ +SG   G   K G+ GVG+A++E++  ++G  G   E I+ RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A+ ++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVIGLQETRREGQGSLAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 3.000e-41
Identity = 103/253 (40.71%), Postives = 145/253 (57.31%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R  G          GRD +N+NG RL   A++++ S+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 8.170e-41
Identity = 103/252 (40.87%), Postives = 146/252 (57.94%), Query Frame = 0
Query:    2 FIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            F    ETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+   PK GG    F    +K   ++CLD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   46 FGTFNETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK-GGVQQTF-QSSNKGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 292          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 8.560e-41
Identity = 105/253 (41.50%), Postives = 148/253 (58.50%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.820e-40
Identity = 102/253 (40.32%), Postives = 146/253 (57.71%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D   +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F++GYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G           KE +R  LD+IL+RQ DRR VR++++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVTGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 4.890e-40
Identity = 104/253 (41.11%), Postives = 146/253 (57.71%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR  G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+I +RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:  210 DVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRLPPRVAPNRRVR 457          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.170e-39
Identity = 104/253 (41.11%), Postives = 147/253 (58.10%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+V YAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:  692 DVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 939          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.190e-39
Identity = 106/253 (41.90%), Postives = 143/253 (56.52%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR  G+  I     GYV+ +SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KVR  I +   VT F+VGYAPTETA          K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A +++LS++NT+F  PK G         + KE HR  LD+IL+RQ DRRLVRN ++      +S H  V  ++R   R APNR  R
Sbjct:   13 DVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.230e-39
Identity = 106/253 (41.90%), Postives = 143/253 (56.52%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR  G+  I     GYV+ +SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KVR  I +   VT F+VGYAPTETA          K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A +++LS++NT+F  PK G         + KE HR  LD+IL+RQ DRRLVRN ++      +S H  V  ++R   R APNR  R
Sbjct:  125 DVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTR 372          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.400e-39
Identity = 102/253 (40.32%), Postives = 144/253 (56.92%), Query Frame = 0
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 235
            D I +QETR  G+ +I     GYV+ +SG   G   K G+ GVG+ ++E++  ++G +G   E I  RL+KVR  I +   V  F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:  116 DVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVA-FVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K259_9PHAE2.990e-4140.71Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KBZ6_9PHAE3.000e-4140.71Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE8.170e-4140.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7A7_9PHAE8.560e-4141.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSV0_9PHAE2.820e-4040.32Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE4.890e-4041.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE2.170e-3941.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC90_9PHAE2.190e-3941.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE2.230e-3941.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KV75_9PHAE2.400e-3940.32Endo/exonuclease/phosphatase domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..224
e-value: 3.8E-21
score: 77.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142820contigH-elongata_contig142820:8..754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142820.2962.1mRNA_H-elongata_contig142820.2962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142820 8..754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142820.2962.1 ID=prot_H-elongata_contig142820.2962.1|Name=mRNA_H-elongata_contig142820.2962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRES
IARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCHK
SKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEGGRDTLNDNGSRLLA
CATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRR
LVRNITIHPKIESYHCFVSASIRLLRRNAPNRHLRPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf