mRNA_H-elongata_contig142820.2962.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig142820.2962.1
Unique NamemRNA_H-elongata_contig142820.2962.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.990e-41
Identity = 103/253 (40.71%), Postives = 146/253 (57.71%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR +G+ ++     GYV+ +SG   G   K G+ GVG+A++E++  ++G  G   E I+ RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A+ ++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVIGLQETRREGQGSLAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 3.000e-41
Identity = 103/253 (40.71%), Postives = 145/253 (57.31%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R  G          GRD +N+NG RL   A++++ S+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 8.170e-41
Identity = 103/252 (40.87%), Postives = 146/252 (57.94%), Query Frame = 1
Query:    4 FIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            F    ETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+   PK GG    F    +K   ++CLD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   46 FGTFNETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK-GGVQQTF-QSSNKGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 292          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 8.560e-41
Identity = 105/253 (41.50%), Postives = 148/253 (58.50%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.820e-40
Identity = 102/253 (40.32%), Postives = 146/253 (57.71%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D   +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F++GYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G           KE +R  LD+IL+RQ DRR VR++++      +S H  V  ++RL  R APNR +R
Sbjct:   13 DVTGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 4.890e-40
Identity = 104/253 (41.11%), Postives = 146/253 (57.71%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR  G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+I +RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:  210 DVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRLPPRVAPNRRVR 457          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.170e-39
Identity = 104/253 (41.11%), Postives = 147/253 (58.10%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR +G+ +I     GYV+ +SG   G   K G+ GVG+A++E++  ++G +G   E IS RL+KVR  I +   VT F+V YAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:  692 DVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVT-FVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 939          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.190e-39
Identity = 106/253 (41.90%), Postives = 143/253 (56.52%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR  G+  I     GYV+ +SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KVR  I +   VT F+VGYAPTETA          K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A +++LS++NT+F  PK G         + KE HR  LD+IL+RQ DRRLVRN ++      +S H  V  ++R   R APNR  R
Sbjct:   13 DVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTR 260          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.230e-39
Identity = 106/253 (41.90%), Postives = 143/253 (56.52%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR  G+  I     GYV+ +SG   G   K G+ GVG+A++E++  ++G  G   E IS RL+KVR  I +   VT F+VGYAPTETA          K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A +++LS++NT+F  PK G         + KE HR  LD+IL+RQ DRRLVRN ++      +S H  V  ++R   R APNR  R
Sbjct:  125 DVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVT-FVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTR 372          
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.400e-39
Identity = 102/253 (40.32%), Postives = 144/253 (56.92%), Query Frame = 1
Query:    1 DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRESIARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCH------KSKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEG----------GRDTLNDNGSRLLACATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRRLVRNITIHPKI--ESYHCFVSASIRLLRRNAPNRHLR 705
            D I +QETR  G+ +I     GYV+ +SG   G   K G+ GVG+ ++E++  ++G +G   E I  RL+KVR  I +   V  F+VGYAPTET  T        K  F   L   + EV + +HLV++MD NARTG R +G          GRD +N+NG RLL  A++++LS+ NT+F  PK G         + KE +R  LD+IL+RQ DRR VRN+++      +S H  V  ++RL  R APNR +R
Sbjct:  116 DVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVA-FVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRVR 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142820.2962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K259_9PHAE2.990e-4140.71Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KBZ6_9PHAE3.000e-4140.71Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE8.170e-4140.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7A7_9PHAE8.560e-4141.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSV0_9PHAE2.820e-4040.32Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE4.890e-4041.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE2.170e-3941.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC90_9PHAE2.190e-3941.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE2.230e-3941.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KV75_9PHAE2.400e-3940.32Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142820contigH-elongata_contig142820:8..754 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score94.0
Seed ortholog evalue1e-16
Seed eggNOG ortholog8479.XP_005314530.1
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGs39VM0@33154,3BPUP@33208,3D6HY@33213,48ETK@7711,49BUS@7742,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size711
Cds size711
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929847.8902822-CDS-H-elongata_contig142820:7..4161622929847.8902822-CDS-H-elongata_contig142820:7..416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142820 8..416 +
1691679181.8774354-CDS-H-elongata_contig142820:7..4161691679181.8774354-CDS-H-elongata_contig142820:7..416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142820 8..416 +
1622929847.907241-CDS-H-elongata_contig142820:452..7541622929847.907241-CDS-H-elongata_contig142820:452..754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142820 453..754 +
1691679181.8861427-CDS-H-elongata_contig142820:452..7541691679181.8861427-CDS-H-elongata_contig142820:452..754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142820 453..754 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142820.2962.1prot_H-elongata_contig142820.2962.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig142820 8..754 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig142820.2962.1

>prot_H-elongata_contig142820.2962.1 ID=prot_H-elongata_contig142820.2962.1|Name=mRNA_H-elongata_contig142820.2962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
DFIAIQETRHDGRTTIQAPAAGYVVHYSGHCHGDGGKPGILGVGLAVRES
IARALGPDGIVPEHISARLLKVRRVIFKHRAVTTFIVGYAPTETAATCHK
SKFLKELRNTVAEVPASEHLVLIMDTNARTGGRGEGGRDTLNDNGSRLLA
CATEHKLSIVNTFFSKPKRGGNSDAFIYERSKESHRWCLDYILVRQNDRR
LVRNITIHPKIESYHCFVSASIRLLRRNAPNRHLRPE
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mRNA from alignment at H-elongata_contig142820:8..754+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig142820.2962.1 ID=mRNA_H-elongata_contig142820.2962.1|Name=mRNA_H-elongata_contig142820.2962.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=747bp|location=Sequence derived from alignment at H-elongata_contig142820:8..754+ (Himanthalia elongata Himel1 dioecious)
GACTTCATCGCCATACAGGAGACTCGCCACGATGGAAGGACAACCATCCA AGCACCAGCCGCTGGTTATGTCGTGCACTACAGCGGTCATTGCCATGGTG ATGGAGGTAAGCCCGGGATACTCGGAGTTGGTCTGGCTGTCAGGGAGTCT ATCGCTCGCGCACTCGGCCCAGATGGCATTGTGCCGGAACACATCAGTGC GCGGCTGCTGAAGGTGAGGAGGGTGATTTTCAAACACAGAGCCGTCACAA CCTTCATCGTGGGATACGCTCCGACTGAAACAGCAGCCACCTGTCACAAG TCTAAGTTCTTGAAGGAACTTCGCAACACTGTCGCTGAGGTACCTGCCAG CGAACACCTGGTTTTGATTATGGATACTAACGCCCGTACGGGAGGAAGAG GAGAGGGAGGTTGACTAGGGGATGTCCGGGTTTTAGGACCATAAGGAAGA GACACTCTCAATGACAACGGTTCGCGACTTCTAGCATGTGCTACTGAGCA CAAGCTGTCGATTGTCAACACATTTTTCAGCAAGCCGAAGCGTGGGGGAA ACTCGGATGCGTTCATATATGAGAGGTCGAAGGAATCCCACCGCTGGTGC CTGGACTACATCCTGGTACGCCAGAATGACCGCAGGCTCGTCCGGAATAT TACTATCCACCCAAAGATTGAATCATACCATTGCTTTGTTTCAGCTTCCA TCCGCCTCCTACGACGGAACGCACCCAACCGCCACCTGAGACCGGAA
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Coding sequence (CDS) from alignment at H-elongata_contig142820:8..754+

>mRNA_H-elongata_contig142820.2962.1 ID=mRNA_H-elongata_contig142820.2962.1|Name=mRNA_H-elongata_contig142820.2962.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig142820:8..754+ (Himanthalia elongata Himel1 dioecious)
GACTTCATCGCCATACAGGAGACTCGCCACGATGGAAGGACAACCATCCA
AGCACCAGCCGCTGGTTATGTCGTGCACTACAGCGGTCATTGCCATGGTG
ATGGAGGTAAGCCCGGGATACTCGGAGTTGGTCTGGCTGTCAGGGAGTCT
ATCGCTCGCGCACTCGGCCCAGATGGCATTGTGCCGGAACACATCAGTGC
GCGGCTGCTGAAGGTGAGGAGGGTGATTTTCAAACACAGAGCCGTCACAA
CCTTCATCGTGGGATACGCTCCGACTGAAACAGCAGCCACCTGTCACAAG
TCTAAGTTCTTGAAGGAACTTCGCAACACTGTCGCTGAGGTACCTGCCAG
CGAACACCTGGTTTTGATTATGGATACTAACGCCCGTACGGGAGGAAGAG
GAGAGGGAGGACTTCATCGCCATACAGGAGACTCGCCACGATGGAAGGAC
AACCATCCAAGCACCAGCCGCTGGTTATGTCGTGCACTACAGCGGTCATT
GCCATGGTGATGGAGGTAAGCCCGGGATACTCGGAGTTGGTCTGGCTGTC
AGGGAGTCTATCGCTCGCGCACTCGGCCCAGATGGCATTGTGCCGGAACA
CATCAGTGCGCGGCTGCTGAAGGTGAGGAGGGTGATTTTCAAACACAGAG
CCGTCACAACCTTCATCGTGGGATACGCTCCGACTGAAACAGCAGCCACC
TGTCACAAGTCTAAGTTCTTGAAGGAACTTCGCAACACTGTCGCTGAGGT
ACCTGCCAGCGAACACCTGGTTTTGATTATGGATACTAACGCCCGTACGG
GAGGAAGAGGAGAGGGAGGAAGAGACACTCTCAATGACAACGGTTCGCGA
CTTCTAGCATGTGCTACTGAGCACAAGCTGTCGATTGTCAACACATTTTT
CAGCAAGCCGAAGCGTGGGGGAAACTCGGATGCGTTCATATATGAGAGGT
CGAAGGAATCCCACCGCTGGTGCCTGGACTACATCCTGGTACGCCAGAAT
GACCGCAGGCTCGTCCGGAATATTACTATCCACCCAAAGATTGAATCATA
CCATTGCTTTGTTTCAGCTTCCATCCGCCTCCTACGACGGAACGCACCCA
ACCGCCACCTGAGACCGGAAGAAGAGACACTCTCAATGACAACGGTTCGC
GACTTCTAGCATGTGCTACTGAGCACAAGCTGTCGATTGTCAACACATTT
TTCAGCAAGCCGAAGCGTGGGGGAAACTCGGATGCGTTCATATATGAGAG
GTCGAAGGAATCCCACCGCTGGTGCCTGGACTACATCCTGGTACGCCAGA
ATGACCGCAGGCTCGTCCGGAATATTACTATCCACCCAAAGATTGAATCA
TACCATTGCTTTGTTTCAGCTTCCATCCGCCTCCTACGACGGAACGCACC
CAACCGCCACCTGAGACCGGAA
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