prot_H-elongata_contig142510.2942.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142510.2942.1
Unique Nameprot_H-elongata_contig142510.2942.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig142510.2942.1 vs. uniprot
Match: D8LNJ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.790e-18
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0 
Query:    1 MEATHLRGEPLSYTHLSMSRAAKDGRMDIVIWLHNYTDVEQAATAMDSAAAGGHLE-VKLLQRRK 64
            M + H   +PLSYTHL +SRAAK+GRMD+V WLH+YTDV Q  +AMDSAAAGGHLE VK L+  +
Sbjct:  150 MISKHAERDPLSYTHLGLSRAAKNGRMDVVRWLHDYTDVPQIPSAMDSAAAGGHLEIVKFLEEHR 214
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142510.2942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNJ7_ECTSI2.790e-1864.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142510contigH-elongata_contig142510:168..371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142510.2942.1mRNA_H-elongata_contig142510.2942.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142510 168..1260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142510.2942.1 ID=prot_H-elongata_contig142510.2942.1|Name=mRNA_H-elongata_contig142510.2942.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MEATHLRGEPLSYTHLSMSRAAKDGRMDIVIWLHNYTDVEQAATAMDSAA
AGGHLEVKLLQRRKLDL*
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